Abstract
In this paper, the characteristics of information systems based on photonic DNA computing are evaluated by simply modeling. Fundamental features of photonic DNA computing clarified with calculations of its performance suggest that selecting applications suitable for photonic DNA computing systems is important. We also considered a simple algorithm for solving the maximum clique problem and found that photonic DNA computing is effective to reduce the amount of DNA strands used and processing time compared to the conventional DNA computing.
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Ferretti, C., Mauri, G., Zandron, C. (eds.): DNA 2004. LNCS, vol. 3384. Springer, Heidelberg (2005)
Carbone, A., Daley, M., Kari, L., McQuillan, I., Pierce, N. (eds.): Pre-Proceedings of the 11th international meeting on DNA computing, London, Ontario (2005)
Tanida, J., Ichioka, Y.: Optical computing. The Optics Encyclopedia, vol. 3, pp. 1883–1902. Wiley-VCH, Berlin (2003)
Ogura, Y., Kawakami, T., Sumiyama, F., Suyama, A., Tanida, J.: Parallel translation of DNA clusters by VCSEL array trapping and temperature control with laser illumination. In: Chen, J., Reif, J.H. (eds.) DNA 2003. LNCS, vol. 2943, pp. 10–18. Springer, Heidelberg (2004)
Ogura, Y., Sumiyama, F., Kawakami, T., Tanida, J.: Manipulation of DNA molecules using optical techniques for optically assisted DNA computing. In: Proc. SPIE, vol. 5515, pp. 100–108 (2004)
Ogura, Y., Kawakami, T., Sumiyama, F., Irie, S., Suyama, A., Tanida, J.: Methods for manipulating DNA molecules in a micrometer scale using optical techniques. In: Ferretti, C., Mauri, G., Zandron, C. (eds.) DNA 2004. LNCS, vol. 3384, pp. 258–267. Springer, Heidelberg (2005)
Ogura, Y., Beppu, T., Takinoue, M., Suyama, A., Tanida, J.: Control of DNA molecules on a microscopic bead using optical techniques for photonic DNA memory. In: Pre-Proceedings of the 11th international meeting on DNA computing, pp. 78–88 (2005)
Ouyang, Q., Kaplan, P.D., Liu, S., Libchaber, A.: DNA solution of the maximal clique problem. Science 278, 446–449 (1997)
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Ogura, Y., Shogenji, R., Saito, S., Tanida, J. (2006). Evaluation of Fundamental Characteristics of Information Systems Based on Photonic DNA Computing. In: Ijspeert, A.J., Masuzawa, T., Kusumoto, S. (eds) Biologically Inspired Approaches to Advanced Information Technology. BioADIT 2006. Lecture Notes in Computer Science, vol 3853. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11613022_17
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DOI: https://doi.org/10.1007/11613022_17
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-31253-6
Online ISBN: 978-3-540-32438-6
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