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Protein Function Classification Based on Gene Ontology

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Information Retrieval Technology (AIRS 2005)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 3689))

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Abstract

Most proteins interact with other proteins, cells, tissues or diseases. They have biological functions and can be classified according to their functions. With the functions and the functional relations of proteins, we can explain many biological phenomena and obtain answers in solving biological problems. Therefore, it is important to determine the functions of proteins. In this paper we present a protein function classification method for the function prediction of proteins. With human proteins assigned to GO molecular function terms, we measure the similarity of proteins to function classes using the functional distribution.

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References

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Author information

Authors and Affiliations

  1. Department of Computer Science & Engineering, Pusan National University, 30 Jangjeon-dong Geumjung-gu, Busan, 609-735, Korea

    Dae-Won Park & Hyuk-Chul Kwon

  2. Interdisciplinary Program of Bioinformatics, Pusan National University, 30 Jangjeon-dong Geumjung-gu, Busan, 609-735, Korea

    Hyoung-Sam Heo

  3. Department of Pharmacy, Pusan National University, 30 Jangjeon-dong Geumjung-gu, Busan, 609-735, Korea

    Hea-Young Chung

Authors
  1. Dae-Won Park
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  2. Hyoung-Sam Heo
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  3. Hyuk-Chul Kwon
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  4. Hea-Young Chung
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Editor information

Editors and Affiliations

  1. Department of Computer Science and Engineering, Pohang University of Science and Technology, San 31, Hyoja-dong, Nam-gu, 790-784, Pohang, Korea

    Gary Geunbae Lee

  2. Computer and Communication Media Research, NEC Corp., Miyazaki 4-1-1, Miyamae-ku, 216-8555, Kawasaki, Japan

    Akio Yamada

  3. Human-Computer Communications Laboratory, Department of Systems Engineering and Engineering Management, The Chinese University of Hong Kong, Hong Kong

    Helen Meng

  4. School of Engineering, Information and Communications University, 119, Munjiro, Yuseong-gu, 305-732, Daejeon, Korea

    Sung Hyon Myaeng

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© 2005 Springer-Verlag Berlin Heidelberg

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Park, DW., Heo, HS., Kwon, HC., Chung, HY. (2005). Protein Function Classification Based on Gene Ontology. In: Lee, G.G., Yamada, A., Meng, H., Myaeng, S.H. (eds) Information Retrieval Technology. AIRS 2005. Lecture Notes in Computer Science, vol 3689. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11562382_69

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  • DOI: https://doi.org/10.1007/11562382_69

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-29186-2

  • Online ISBN: 978-3-540-32001-2

  • eBook Packages: Computer ScienceComputer Science (R0)

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