Abstract
In recent years, luminescent proteins have been studied for their potential application in a variety of detection systems. Bioluminescent proteins, which do not require an external excitation source, are especially well-suited as reporters in analytical detection. The photoprotein aequorin is a bioluminescent protein that can be engineered for use as a molecular reporter under a wide range of conditions while maintaining its sensitivity. Herein, the characteristics of aequorin as well as the engineering and production of aequorin variants and their impact on signal detection in biological systems are presented. The structural features and activity of aequorin, its benefits as a label for sensing and applications in highly sensitive detection, as well as in gaining insight into biological processes are discussed. Among those, focus has been placed on the highly sensitive calcium detection in vivo, in vitro DNA and small molecule sensing, and development of in vivo imaging technologies.
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References
Eglen RM, Reisine T (2008) Photoproteins: important new tools in drug discovery. Assay Drug Dev Technol 6(5):659–671. doi:10.1089/adt.2008.160
Rowe L, Dikici E, Daunert S (2009) Engineering bioluminescent proteins: expanding their analytical potential. Anal Chem 81(21):8662–8668. doi:10.1021/Ac9007286
The Royal Swedish Academy of Sciences (2008) The Nobel Prize in Chemistry 2008-Press Release
Scott D, Dikici E, Ensor M, Daunert S (2011) Bioluminescence and its impact on bioanalysis. Annu Rev Anal Chem (Palo Alto Calif) 4:297–319. doi:10.1146/annurev-anchem-061010-113855
Shimomura O, Johnson FH, Saiga Y (1962) Extraction, purification and properties of aequorin, a bioluminescent protein from the luminous hydromedusan, Aequorea. J Cell Compar Physiol 59:223–239
Lewis JC, Daunert S (2000) Photoproteins as luminescent labels in binding assays. Fresen J Anal Chem 366(6–7):760–768
Roda A, Pasini P, Mirasoli M, Michelini E, Guardigli M (2004) Biotechnological applications of bioluminescence and chemiluminescence. Trends Biotechnol 22(6):295–303. doi:10.1016/j.tibtech.2004.03.011
Prendergast FG (2000) Bioluminescence illuminated. Nature 405(6784):291–293. doi:10.1038/35012734
Shimomura O, Johnson FH (1975) Chemical nature of bioluminescence systems in coelenterates. Proc Natl Acad Sci USA 72(4):1546–1549
Shimomura O, Inoue S, Johnson FH, Haneda Y (1980) Widespread occurrence of coelenterazine in marine bioluminescence. Comp Biochem Phys B 65(2):435–437. doi:10.1016/0305-0491(80)90044-9
Nakatsu T, Ichiyama S, Hiratake J, Saldanha A, Kobashi N, Sakata K, Kato H (2006) Structural basis for the spectral difference in luciferase bioluminescence. Nature 440(7082):372–376. doi:10.1038/nature04542
Marques SM, da Silva JCGE (2009) Firefly bioluminescence: a mechanistic approach of luciferase catalyzed reactions. IUBMB Life 61(1):6–17. doi:10.1002/Iub.134
Widder EA (2010) Bioluminescence in the Ocean: Science 328(5979):704–708. doi:10.1126/science.1174269
Haddock SH, Moline MA, Case JF (2010) Bioluminescence in the sea. Ann Rev Mar Sci 2:443–493. doi:10.1146/annurev-marine-120308-081028
Chen SF, Ferre N, Liu YJ (2013) QM/MM study on the light emitters of aequorin chemiluminescence, bioluminescence, and fluorescence: a general understanding of the bioluminescence of several marine organisms. Chemistry 19(26):8466–8472. doi:10.1002/chem.201300678
Brini M (2008) Calcium-sensitive photoproteins. Methods 46(3):160–166. doi:10.1016/j.ymeth.2008.09.011
van Oort B, Eremeeva EV, Koehorst RBM, Laptenok SP, van Amerongen H, van Berkel WJH, Malikova NP, Markova SV, Vysotski ES, Visser AJWG, Lee J (2009) Picosecond fluorescence relaxation spectroscopy of the calcium-discharged photoproteins aequorin and obelin. Biochem Us 48(44):10486–10491. doi:10.1021/Bi901436m
Inouye S, Sato J, Sahara-Miura Y (2011) Recombinant Gaussia luciferase with a reactive cysteine residue for chemical conjugation: expression, purification and its application for bioluminescent immunoassays. Biochem Biophys Res Commun 410(4):792–797. doi:10.1016/j.bbrc.2011.06.063
Malikova NP, Burakova LP, Markova SV, Vysotski ES (2014) Characterization of hydromedusan Ca(2+)-regulated photoproteins as a tool for measurement of Ca(2+)concentration. Anal Bioanal Chem 406(23):5715–5726. doi:10.1007/s00216-014-7986-2
Lewis JC, Cullen LC, Daunert S (2000) Site-specifically labeled photoprotein-thyroxine conjugates using aequorin mutants containing unique cysteine residues: applications for binding assays (Part II). Bioconjug Chem 11(2):140–145
Deo SK, Daunert S (2001) An immunoassay for Leu-enkephalin based on a C-terminal aequorin-peptide fusion. Anal Chem 73(8):1903–1908
Chiesa A, Rapizzi E, Tosello V, Pinton P, de Virgilio M, Fogarty KE, Rizzuto R (2001) Recombinant aequorin and green fluorescent protein as valuable tools in the study of cell signalling. Biochem J 355(Pt 1):1–12
Mirasoli M, Deo SK, Lewis JC, Roda A, Daunert S (2002) Bioluminescence immunoassay for cortisol using recombinant aequorin as a label. Anal Biochem 306(2):204–211
Dupriez VJ, Maes K, Le Poul E, Burgeon E, Detheux M (2002) Aequorin-based functional assays for G-protein-coupled receptors, ion channels, and tyrosine kinase receptors. Receptors Channels 8(5–6):319–330
Eisenstein M (2009) GPCRs: insane in the membrane. Nat Methods 6(12):929–933. doi:10.1038/nmeth1209-929
Bonora M, Giorgi C, Bononi A, Marchi S, Patergnani S, Rimessi A, Rizzuto R, Pinton P (2013) Subcellular calcium measurements in mammalian cells using jellyfish photoprotein aequorin-based probes. Nat Protoc 8(11):2105–2118. doi:10.1038/nprot.2013.127
Kawasaki H, Nakayama S, Kretsinger RH (1998) Classification and evolution of EF-hand proteins. Biometals 11(4):277–295. doi:10.1023/A:1009282307967
Lewit-Bentley A, Rety S (2000) EF-hand calcium-binding proteins. Curr Opin Struct Biol 10(6):637–643
Eremeeva EV, Markova SV, Westphal AH, Visser AJWG, van Berkel WJH, Vysotski ES (2009) The intrinsic fluorescence of apo-obelin and apo-aequorin and use of its quenching to characterize coelenterazine binding. FEBS Lett 583(12):1939–1944. doi:10.1016/j.febslet.2009.04.043
Shimomura O, Johnson FH (1978) Peroxidized coelenterazine, the active group in the photoprotein aequorin. Proc Natl Acad Sci USA 75(6):2611–2615
Head JF, Inouye S, Teranishi K, Shimomura O (2000) The crystal structure of the photoprotein aequorin at 2.3 A resolution. Nature 405(6784):372–376. doi:10.1038/35012659
Shimomura O, Johnson FH (1973) Chemical nature of the light emitt er in bioluminescence of aequorin. Tetrahedron Lett 31:2963–2966
Miller AL, Karplus, E., Jaffe, LF (1994) Imaging [Ca2+] with aequorin using a photon imaging detector. In: Nuccitelli R (ed) Methods in cell biology, vol 40. Academic Press, San Diego
Webb SE, Karplus E, Miller AL (2013) Retrospective on the development of aequorin and aequorin-based imaging to visualize changes in intracellular free [Ca]. Mol Reprod Dev. doi:10.1002/mrd.22298
Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol 1(1):11–21. doi:10.1038/35036035
Webb SE, Fluck RA, Miller AL (2011) Calcium signaling during the early development of medaka and zebrafish. Biochimie 93(12):2112–2125. doi:10.1016/j.biochi.2011.06.011
Giorgi C, Baldassari F, Bononi A, Bonora M, De Marchi E, Marchi S, Missiroli S, Patergnani S, Rimessi A, Suski JM, Wieckowski MR, Pinton P (2012) Mitochondrial Ca(2+) and apoptosis. Cell Calcium 52(1):36–43. doi:10.1016/j.ceca.2012.02.008
Brini M, Ottolini D, Cali T, Carafoli E (2013) Calcium in health and disease. Metal Ions Life Sci 13:81–137. doi:10.1007/978-94-007-7500-8_4
Filmore D (2004) It’s a GCPR world. Mod Drug Discov (ACS) 7(11):24–28
Miller KJ, Murphy BJ, Pelleymounter MA (2004) Central G-Protein Coupled Receptors (GPCR)s as molecular targets for the treatment of obesity: assets, liabilities and development status. Curr Drug Targets CNS Neurol Disord 3(5):357–377
Shimomura O, Johnson FH, Saiga Y (1963) Microdetermination of calcium by Aequorin luminescence. Science 140(3573):1339–1340. doi:10.1126/science.140.3573.1339
Le Poul E, Hisada S, Mizuguchi Y, Dupriez VJ, Burgeon E, Detheux M (2002) Adaptation of aequorin functional assay to high throughput screening. J Biomol Screen 7(1):57–65. doi:10.1089/108705702753520341
Klabunde T, Hessler G (2002) Drug design strategies for targeting G-protein-coupled receptors. Chembiochem: A Eur J Chem Biol 3(10):928–944. doi:10.1002/1439-7633(20021004)3:10<928:AID-CBIC928>3.0.CO;2-5
Haq N, Grose D, Ward E, Chiu O, Tigue N, Dowell SJ, Powell AJ, Chen MX (2013) A high-throughput assay for connexin 43 (Cx43, GJA1) gap junctions using codon-optimized aequorin. Assay Drug Dev Technol 11(2):93–100. doi:10.1089/adt.2012.469
Pozzan T, Rudolf R (2009) Measurements of mitochondrial calcium in vivo. Biochim Biophys Acta 1787(11):1317–1323. doi:10.1016/j.bbabio.2008.11.012
Davies SA, Terhzaz S (2009) Organellar calcium signalling mechanisms in Drosophila epithelial function. J Experiment Biol 212(Pt 3):387–400. doi:10.1242/jeb.024513
Berridge MJ, Bootman MD, Roderick HL (2003) Calcium signalling: dynamics, homeostasis and remodelling. Nat Rev Mol Cell Biol 4(7):517–529. doi:10.1038/nrm1155
Rizzuto R, Pozzan T (2006) Microdomains of intracellular Ca2+: molecular determinants and functional consequences. Physiol Rev 86(1):369–408. doi:10.1152/physrev.00004.2005
Mellstrom B, Savignac M, Gomez-Villafuertes R, Naranjo JR (2008) Ca2+-operated transcriptional networks: molecular mechanisms and in vivo models. Physiol Rev 88(2):421–449. doi:10.1152/physrev.00041.2005
Grienberger C, Konnerth A (2012) Imaging calcium in neurons. Neuron 73(5):862–885. doi:10.1016/j.neuron.2012.02.011
Bootman MD (2012) Calcium signaling. Cold Spring Harb Perspect Biol 4(7):a011171. doi:10.1101/cshperspect.a011171
Ohashi W, Inouye S, Yamazaki T, Hirota H (2005) NMR analysis of the Mg2+-binding properties of aequorin, a Ca2+-binding photoprotein. J Biochem 138(5):613–620. doi:10.1093/jb/mvi164
Grabarek Z (2006) Structural basis for diversity of the EF-hand calcium-binding proteins. J Mol Biol 359(3):509–525. doi:10.1016/j.jmb.2006.03.066
Dudev T, Lim C (2003) Principles governing Mg, Ca, and Zn binding and selectivity in proteins. Chem Rev 103(3):773–788. doi:10.1021/cr020467n
Ohashi W, Inouye S, Yamazaki T, Doi-Katayama Y, Yokoyama S, Hirota H (2005) Backbone 1H, 13C and 15N resonance assignments for the Mg2+-bound form of the Ca2+-binding photoprotein aequorin. J Biomol NMR 31(4):375–376. doi:10.1007/s10858-005-1609-3
Biagioli M, Pinton P, Scudiero R, Ragghianti M, Bucci S, Rizzuto R (2005) Aequorin chimeras as valuable tool in the measurement of Ca2+ concentration during cadmium injury. Toxicology 208(3):389–398. doi:10.1016/j.tox.2004.11.038
Strynadka NC, James MN (1989) Crystal structures of the helix-loop-helix calcium-binding proteins. Annu Rev Biochem 58:951–998. doi:10.1146/annurev.bi.58.070189.004511
Tricoire L, Tsuzuki K, Courjean O et al (2006) Calcium dependence of aequorin bioluminescnece dissected by random mutagenesis. cPNAS 103(25):5
de la Fuente S, Fonteriz RI, de la Cruz PJ, Montero M, Alvarez J (2012) Mitochondrial free [Ca(2+)] dynamics measured with a novel low-Ca(2+) affinity aequorin probe. Biochem J 445(3):371–376. doi:10.1042/BJ20120423
Tricoire L, Tsuzuki K, Courjean O, Gibelin N, Bourout G, Rossier J, Lambolez B (2006) Calcium dependence of aequorin bioluminescence dissected by random mutagenesis. Proc Natl Acad Sci USA 103(25):9500–9505. doi:10.1073/pnas.0603176103
Villalobos C, Alonso MT, Garcia-Sancho J (2009) Bioluminescence imaging of calcium oscillations inside intreacellular organelles In: Rich PB, Doulliet C (ed) Bioluminescence. Methods in molecular biology, vol 574. Humana Press, New York, pp 203–214
Montero M, Brini M, Marsault R, Alvarez J, Sitia R, Pozzan T, Rizzuto R (1995) Monitoring dynamic changes in free Ca2+ concentration in the endoplasmic reticulum of intact cells. EMBO J 14(22):5467–5475
de la Fuente S, Matesanz-Isabel J, Fonteriz RI, Montero M, Alvarez J (2014) Dynamics of mitochondrial Ca2+ uptake in MICU1-knockdown cells. Biochem J 458(1):33–40. doi:10.1042/BJ20131025
Orrenius S, Zhivotovsky B, Nicotera P (2003) Regulation of cell death: the calcium-apoptosis link. Nat Rev Mol Cell Biol 4(7):552–565. doi:10.1038/nrm1150
Williams GS, Boyman L, Chikando AC, Khairallah RJ, Lederer WJ (2013) Mitochondrial calcium uptake. Proc Natl Acad Sci USA 110(26):10479–10486. doi:10.1073/pnas.1300410110
Rizzuto R, Simpson AW, Brini M, Pozzan T (1992) Rapid changes of mitochondrial Ca2+ revealed by specifically targeted recombinant aequorin. Nature 358(6384):325–327. doi:10.1038/358325a0
Montero M, Alonso MT, Carnicero E, Cuchillo-Ibanez I, Albillos A, Garcia AG, Garcia-Sancho J, Alvarez J (2000) Chromaffin-cell stimulation triggers fast millimolar mitochondrial Ca2+ transients that modulate secretion. Nat Cell Biol 2(2):57–61. doi:10.1038/35000001
Vay L, Hernandez-SanMiguel E, Lobaton CD, Moreno A, Montero M, Alvarez J (2009) Mitochondrial free [Ca2+] levels and the permeability transition. Cell Calcium 45(3):243–250. doi:10.1016/j.ceca.2008.10.007
Giorgi C, Ito K, Lin HK, Santangelo C, Wieckowski MR, Lebiedzinska M, Bononi A, Bonora M, Duszynski J, Bernardi R, Rizzuto R, Tacchetti C, Pinton P, Pandolfi PP (2010) PML regulates apoptosis at endoplasmic reticulum by modulating calcium release. Science 330(6008):1247–1251. doi:10.1126/science.1189157
Pulli I, Blom T, Lof C, Magnusson M, Rimessi A, Pinton P, Tornquist K (2015) A novel chimeric aequorin fused with caveolin-1 reveals a sphingosine kinase 1-regulated Ca microdomain in the caveolar compartment. Biochim Biophys Acta. doi:10.1016/j.bbamcr.2015.04.005
Zhang Y, Wang Y, Wan Z, Liu S, Cao Y, Zeng Z (2014) Sphingosine kinase 1 and cancer: a systematic review and meta-analysis. PLoS ONE 9(2):e90362. doi:10.1371/journal.pone.0090362
Hollander MC, Blumenthal GM, Dennis PA (2011) PTEN loss in the continuum of common cancers, rare syndromes and mouse models. Nat Rev Cancer 11(4):289–301. doi:10.1038/nrc3037
Napoli E, Ross-Inta C, Wong S, Hung C, Fujisawa Y, Sakaguchi D, Angelastro J, Omanska-Klusek A, Schoenfeld R, Giulivi C (2012) Mitochondrial dysfunction in Pten haplo-insufficient mice with social deficits and repetitive behavior: interplay between Pten and p53. PLoS ONE 7(8):e42504. doi:10.1371/journal.pone.0042504
Bononi A, Bonora M, Marchi S, Missiroli S, Poletti F, Giorgi C, Pandolfi PP, Pinton P (2013) Identification of PTEN at the ER and MAMs and its regulation of Ca(2+) signaling and apoptosis in a protein phosphatase-dependent manner. Cell Death Differ 20(12):1631–1643. doi:10.1038/cdd.2013.77
De Stefani D, Raffaello A, Teardo E, Szabo I, Rizzuto R (2011) A forty-kilodalton protein of the inner membrane is the mitochondrial calcium uniporter. Nature 476(7360):336–340. doi:10.1038/nature10230
De Stefani D, Bononi A, Romagnoli A, Messina A, De Pinto V, Pinton P, Rizzuto R (2012) VDAC1 selectively transfers apoptotic Ca2+ signals to mitochondria. Cell Death Differ 19(2):267–273. doi:10.1038/cdd.2011.92
Giorgi C, Bonora M, Sorrentino G, Missiroli S, Poletti F, Suski JM, Galindo Ramirez F, Rizzuto R, Di Virgilio F, Zito E, Pandolfi PP, Wieckowski MR, Mammano F, Del Sal G, Pinton P (2015) p53 at the endoplasmic reticulum regulates apoptosis in a Ca2+ -dependent manner. Proc Natl Acad Sci USA 112(6):1779–1784. doi:10.1073/pnas.1410723112
Pan X, Liu J, Nguyen T, Liu C, Sun J, Teng Y, Fergusson MM, Rovira II, Allen M, Springer DA, Aponte AM, Gucek M, Balaban RS, Murphy E, Finkel T (2013) The physiological role of mitochondrial calcium revealed by mice lacking the mitochondrial calcium uniporter. Nat Cell Biol 15(12):1464–1472. doi:10.1038/ncb2868
Patron M, Raffaello A, Granatiero V, Tosatto A, Merli G, De Stefani D, Wright L, Pallafacchina G, Terrin A, Mammucari C, Rizzuto R (2013) The mitochondrial calcium uniporter (MCU): molecular identity and physiological roles. J Biol Chem 288(15):10750–10758. doi:10.1074/jbc.R112.420752
Qiu J, Tan YW, Hagenston AM, Martel MA, Kneisel N, Skehel PA, Wyllie DJ, Bading H, Hardingham GE (2013) Mitochondrial calcium uniporter Mcu controls excitotoxicity and is transcriptionally repressed by neuroprotective nuclear calcium signals. Nat Commun 4:2034. doi:10.1038/ncomms3034
Borghi A, Rimessi A, Minghetti S, Corazza M, Pinton P, Virgili A (2015) Efficacy of magnesium chloride in the treatment of Hailey-Hailey disease: from serendipity to evidence of its effect on intracellular Ca(2+) homeostasis. Int J Dermatol 54(5):543–548. doi:10.1111/ijd.12410
Brini M, De Giorgi F, Murgia M, Marsault R, Massimino ML, Cantini M, Rizzuto R, Pozzan T (1997) Subcellular analysis of Ca2+ homeostasis in primary cultures of skeletal muscle myotubes. Mol Biol Cell 8(1):129–143
Brini M, Manni S, Pierobon N, Du GG, Sharma P, MacLennan DH, Carafoli E (2005) Ca2+ signaling in HEK-293 and skeletal muscle cells expressing recombinant ryanodine receptors harboring malignant hyperthermia and central core disease mutations. J Biol Chem 280(15):15380–15389. doi:10.1074/jbc.M410421200
Giorgi C, Romagnoli A, Agnoletto C, Bergamelli L, Sorrentino G, Brini M, Pozzan T, Meldolesi J, Pinton P, Rizzuto R (2011) Translocation of signalling proteins to the plasma membrane revealed by a new bioluminescent procedure. BMC Cell Biol 12:27. doi:10.1186/1471-2121-12-27
Roda A, Guardigli M, Michelini E, Mirasoli M (2009) Nanobioanalytical luminescence: Forster-type energy transfer methods. Anal Bioanal Chem 393(1):109–123. doi:10.1007/s00216-008-2435-8
Rogers KL, Stinnakre J, Agulhon C, Jublot D, Shorte SL, Kremer EJ, Brulet P (2005) Visualization of local Ca2+ dynamics with genetically encoded bioluminescent reporters. Eur J Neurosci 21(3):597–610. doi:10.1111/j.1460-9568.2005.03871.x
Shaner NC, Steinbach PA, Tsien RY (2005) A guide to choosing fluorescent proteins. Nat Methods 2(12):905–909. doi:10.1038/nmeth819
Drobac E, Tricoire L, Chaffotte AF, Guiot E, Lambolez B (2010) Calcium imaging in single neurons from brain slices using bioluminescent reporters. J Neurosci Res 88(4):695–711. doi:10.1002/jnr.22249
Naumann EA, Kampff AR, Prober DA, Schier AF, Engert F (2010) Monitoring neural activity with bioluminescence during natural behavior. Nat Neurosci 13(4):513–520. doi:10.1038/nn.2518
Rodriguez-Garcia A, Rojo-Ruiz J, Navas-Navarro P, Aulestia FJ, Gallego-Sandin S, Garcia-Sancho J, Alonso MT (2014) GAP, an aequorin-based fluorescent indicator for imaging Ca2+ in organelles. Proc Natl Acad Sci USA 111(7):2584–2589. doi:10.1073/pnas.1316539111
Manjarres IM, Chamero P, Domingo B, Molina F, Llopis J, Alonso MT, Garcia-Sancho J (2008) Red and green aequorins for simultaneous monitoring of Ca2+ signals from two different organelles. Pflugers Arch 455(5):961–970. doi:10.1007/s00424-007-0349-5
Bakayan A, Vaquero CF, Picazo F, Llopis J (2011) Red fluorescent protein-aequorin fusions as improved bioluminescent Ca2+ reporters in single cells and mice. PLoS ONE 6(5):e19520. doi:10.1371/journal.pone.0019520
Bakayan A, Domingo B, Miyawaki A, Llopis J (2014) Imaging Ca2+ activity in mammalian cells and zebrafish with a novel red-emitting aequorin variant. Pflugers Arch—Eur J Physiol 1–12. doi:10.1007/s00424-014-1639-3
Cheung CY, Webb SE, Love DR, Miller AL (2011) Visualization, characterization and modulation of calcium signaling during the development of slow muscle cells in intact zebrafish embryos. Int J Develop Biol 55(2):153–174. doi:10.1387/ijdb.103160cc
Martin JR (2012) In vivo functional brain imaging using a genetically encoded Ca2+-sensitive bioluminescence reporter, GFP-Aequorin. In: Martin JR (ed) Genetically Encoded Functional Indicators, vol 72. Neuromethods. Humana Press, New York, pp 1–26
Martin JR, Rogers KL, Chagneau C, Brulet P (2007) In vivo bioluminescence imaging of Ca signalling in the brain of Drosophila. PLoS ONE 2(3):e275. doi:10.1371/journal.pone.0000275
Rogers KL, Picaud S, Roncali E, Boisgard R, Colasante C, Stinnakre J, Tavitian B, Brulet P (2007) Non-invasive in vivo imaging of calcium signaling in mice. PLoS ONE 2(10):e974. doi:10.1371/journal.pone.0000974
Dikici E, Rowe L, Moschou EA, Rothert A, Deo SK, Daunert S (2006) Luminescent proteins: applications in microfluidics and miniaturized analytical systems. In: Photoproteins in bioanalysis. Wiley-VCH Verlag GmbH & Co. KGaA, pp 179–198. doi:10.1002/3527609148.ch10
Menon V, Ranganathn A, Jorgensen VH, Sabio M, Christoffersen CT, Uberti MA, Jones KA, Babu PS (2008) Development of an aequorin luminescence calcium assay for high-throughput screening using a plate reader, the LumiLux. Assay Drug Dev Technol 6(6):787–793. doi:10.1089/adt.2008.0157
Tsuji FI, Inouye S, Goto T, Sakaki Y (1986) Site-specific mutagenesis of the calcium-binding photoprotein aequorin. Proc Natl Acad Sci USA 83(21):8107–8111
Kurose K, Inouye S, Sakaki Y, Tsuji FI (1989) Bioluminescence of the Ca2+-binding photoprotein aequorin after cysteine modification. Proc Natl Acad Sci USA 86(1):80–84
Nomura M, Inouye S, Ohmiya Y, Tsuji FI (1991) A C-terminal proline is required for bioluminescence of the Ca(2+)-binding photoprotein, aequorin. FEBS Lett 295(1–3):63–66
Ohmiya Y, Ohashi M, Tsuji FI (1992) Two excited states in aequorin bioluminescence induced by tryptophan modification. FEBS Lett 301(2):197–201
Ohmiya Y, Tsuji FI (1993) Bioluminescence of the Ca(2+)-binding photoprotein, aequorin, after histidine modification. FEBS Lett 320(3):267–270
Vysotski ES, Lee J (2004) Ca2+-regulated photoproteins: structural insight into the bioluminescence mechanism. Acc Chem Res 37(6):405–415. doi:10.1021/ar0400037
Ohmiya Y, Hirano T (1996) Shining the light: the mechanism of the bioluminescence reaction of calcium-binding photoproteins. Chem Biol 3(5):337–347
Dikici E, Qu X, Rowe L, Millner L, Logue C, Deo SK, Ensor M, Daunert S (2009) Aequorin variants with improved bioluminescence properties. Protein Eng Des Select (PEDS) 22(4):243–248. doi:10.1093/protein/gzn083
Stepanyuk GA, Golz S, Markova SV, Frank LA, Lee J, Vysotski ES (2005) Interchange of aequorin and obelin bioluminescence color is determined by substitution of one active site residue of each photoprotein. FEBS Lett 579(5):1008–1014. doi:10.1016/j.febslet.2005.01.004
Rowe L, Rothert A, Logue C, Ensor CM, Deo SK, Daunert S (2008) Spectral tuning of photoproteins by partnering site-directed mutagenesis strategies with the incorporation of chromophore analogs. Protein Eng Des Select (PEDS) 21(2):73–81. doi:10.1093/protein/gzm073
Tsuzuki K, Tricoire L, Courjean O, Gibelin N, Rossier J, Lambolez B (2005) Thermostable mutants of the photoprotein aequorin obtained by in vitro evolution. J Biol Chem 280(40):34324–34331. doi:10.1074/jbc.M505303200
Qu X, Rowe L, Dikici E, Ensor M, Daunert S (2014) Aequorin mutants with increased thermostability. Anal Bioanal Chem 406(23):5639–5643. doi:10.1007/s00216-014-8039-6
Rowe L, Ensor M, Mehl R, Daunert S (2010) Modulating the Bioluminescence emission of photoproteins by in vivo site-directed incorporation of non-natural amino acids. ACS Chem Biol 5(5):455–460. doi:10.1021/Cb9002909
England PM (2004) Unnatural amino acid mutagenesis: a precise tool for probing protein structure and function. Biochemistry-Us 43(37):11623–11629. doi:10.1021/bi048862q
Ryu Y, Schultz PG (2006) Efficient incorporation of unnatural amino acids into proteins in Escherichia coli. Nat Methods 3:263–265. doi:10.1038/nmeth864
Wang L, Brock A, Herberich B, Schultz PG (2001) Expanding the genetic code of Escherichia coli. Science 292(5516):498–500. doi:10.1126/science.1060077
Farrell IS, Toroney R, Hazen JL, Mehl RA, Chin JW (2005) Photo-cross-linking interacting proteins with a genetically encoded benzophenone. Nat Methods 2(5):377–384. doi:10.1038/nmeth0505-377
Young TS, Ahmad I, Yin JA, Schultz PG (2010) An enhanced system for unnatural amino acid mutagenesis in E. coli. J Mol Biol 395(2):361–374. doi:10.1016/j.jmb.2009.10.030
Shrestha S, Paeng IR, Deo SK, Daunert S (2002) Cysteine-free mutant of aequorin as a photolabel in immunoassay development. Bioconjug Chem 13(2):269–275
Photoproteins in Bioanalysis (2006) Wiley-VCH, Weinheim
Teasley Hamorsky K, Ensor CM, Wei Y, Daunert S (2008) A bioluminescent molecular switch for glucose. Angew Chem Int Ed Engl 47(20):3718–3721. doi:10.1002/anie.200704440
Ostermeier M, Nixon AE, Shim JH, Benkovic SJ (1999) Combinatorial protein engineering by incremental truncation. Proc Natl Acad Sci USA 96(7):3562–3567
Kanwar M, Wright RC, Date A, Tullman J, Ostermeier M (2013) Protein switch engineering by domain insertion. Methods Enzymol 523:369–388. doi:10.1016/B978-0-12-394292-0.00017-5
Stein V, Alexandrov K (2015) Synthetic protein switches: design principles and applications. Trends Biotechnol 33(2):101–110. doi:10.1016/j.tibtech.2014.11.010
Scott D, Hamorsky KT, Ensor CM, Anderson KW, Daunert S (2011) Cyclic AMP receptor protein-aequorin molecular switch for cyclic AMP. Bioconjug Chem 22(3):475–481. doi:10.1021/bc100486b
Hamorsky KT, Ensor CM, Pasini P, Daunert S (2012) A protein switch sensing system for the quantification of sulfate. Anal Biochem 421(1):172–180. doi:10.1016/j.ab.2011.10.023
Gorokhovatsky AY, Rudenko NV, Marchenkov VV, Skosyrev VS, Arzhanov MA, Burkhardt N, Zakharov MV, Semisotnov GV, Vinokurov LM, Alakhov YB (2003) Homogeneous assay for biotin based on Aequorea victoria bioluminescence resonance energy transfer system. Anal Biochem 313(1):68–75
Rowe L, Deo S, Shofner J, Ensor M, Daunert S (2007) Aequorin-based homogeneous cortisol immunoassay for analysis of saliva samples. Bioconjug Chem 18(6):1772–1777. doi:10.1021/bc070039u
Teasley Hamorsky K, Ensor CM, Dikici E, Pasini P, Bachas L, Daunert S (2012) Bioluminescence inhibition assay for the detection of hydroxylated polychlorinated biphenyls. Anal Chem 84(18):7648–7655. doi:10.1021/ac301872u
Galvan B, Christopoulos TK (1996) Bioluminescence hybridization assays using recombinant aequorin. Application to the detection of prostate-specific antigen mRNA. Anal Chem 68(20):3545–3550
Guenthner PC, Hart CE (1998) Quantitative, competitive PCR assay for HIV-1 using a microplate-based detection system. Biotechniques 24(5):810–816
Song X, Coombes BK, Mahony JB (2000) Quantitation of Chlamydia trachomatis 16S rRNA using NASBA amplification and a bioluminescent microtiter plate assay. Comb Chem High Throughput Screening 3(4):303–313
Coombes BK, Mahony JB (2000) Nucleic acid sequence based amplification (NASBA) of Chlamydia pneumoniae major outer membrane protein (ompA) mRNA with bioluminescent detection. Comb Chem High Throughput Screening 3(4):315–327
White SR, Christopoulos TK (1999) Signal amplification system for DNA hybridization assays based on in vitro expression of a DNA label encoding apoaequorin. Nucleic Acids Res 27(19):e25
Doleman L, Davies L, Rowe L, Moschou EA, Deo S, Daunert S (2007) Bioluminescence DNA hybridization assay for Plasmodium falciparum based on the photoprotein aequorin. Anal Chem 79(11):4149–4153. doi:10.1021/ac0702847
Khot PD, Ko DL, Hackman RC, Fredricks DN (2008) Development and optimization of quantitative PCR for the diagnosis of invasive aspergillosis with bronchoalveolar lavage fluid. BMC Infect Dis 8:73. doi:10.1186/1471-2334-8-73
Russom A, Ahmadian A, Andersson H, Nilsson P, Stemme G (2003) Single-nucleotide polymorphism analysis by allele-specific extension of fluorescently labeled nucleotides in a microfluidic flow-through device. Electrophoresis 24(1–2):158–161. doi:10.1002/elps.200390008
Zerefos PG, Ioannou PC, Traeger-Synodinos J, Dimissianos G, Kanavakis E, Christopoulos TK (2006) Photoprotein aequorin as a novel reporter for SNP genotyping by primer extension-application to the variants of mannose-binding lectin gene. Hum Mutat 27(3):279–285. doi:10.1002/humu.20300
Konstantou J, Ioannou PC, Christopoulos TK (2007) Genotyping of single nucleotide polymorphisms by primer extension reaction and a dual-analyte bio/chemiluminometric assay. Anal Bioanal Chem 388(8):1747–1754. doi:10.1007/s00216-007-1383-z
Iliadi AC, Ioannou PC, Traeger-Synodinos J, Kanavakis E, Christopoulos TK (2008) High-throughput microtiter well-based bioluminometric genotyping of two single-nucleotide polymorphisms in the toll-like receptor-4 gene. Anal Biochem 376(2):235–241. doi:10.1016/j.ab.2008.02.012
Casadei J, Powell MJ, Kenten JH (1990) Expression and secretion of aequorin as a chimeric antibody by means of a mammalian expression vector. Proc Natl Acad Sci USA 87(6):2047–2051
Zenno S, Inouye S (1990) Bioluminescent immunoassay using a fusion protein of protein A and the photoprotein aequorin. Biochem Biophys Res Commun 171(1):169–174
Erikaku T, Zenno S, Inouye S (1991) Bioluminescent immunoassay using a monomeric Fab’-photoprotein aequorin conjugate. Biochem Biophys Res Commun 174(3):1331–1336
Mirasoli M, Michelini, E, DeoS., DikiciE, RodaA, DaunetS(2004) Aequorin fusion proteins as bioluminescent tracers for competitive immunoassays. In: Genetically engineered and optical probes for biomedical applications II, vol 5329. In: Proceedings of SPOE 5329, p 137. doi:10.1117/12.529194
Inouye S, Sato J (2008) Comparison of luminescent immunoassays using biotinylated proteins of aequorin, alkaline phosphatase and horseradish peroxidase as reporters. Biosci Biotechnol Biochem 72(12):3310–3313. doi:10.1271/bbb.80524
Frank LA (2010) Ca2+-regulated photoproteins: effective immunoassay reporters. Sensors 10(12):11287–11300. doi:10.3390/s101211287
Adamczyk M, Moore JA, Shreder K (2002) Dual analyte detection using tandem flash luminescence. Bioorg Med Chem Lett 12(3):395–398
Ito K, Nishimura W, Maeda M, Gomi K, Inouye S, Arakawa H (2007) Highly sensitive and rapid tandem bioluminescent immunoassay using aequorin labeled Fab fragment and biotinylated firefly luciferase. Anal Chim Acta 588(2):245–251. doi:10.1016/j.aca.2007.02.005
Desai UA, Wininger JA, Lewis JC, Ramanathan S, Daunert S (2001) Using epitope-aequorin conjugate recognition in immunoassays for complex proteins. Anal Biochem 294(2):132–140. doi:10.1006/abio.2001.5145
Qu X, Deo SK, Dikici E, Ensor M, Poon M, Daunert S (2007) Bioluminescence immunoassay for angiotensin II using aequorin as a label. Anal Biochem 371(2):154–161. doi:10.1016/j.ab.2007.08.038
Rowe L, Combs K, Deo S, Ensor C, Daunert S, Qu X (2008) Genetically modified semisynthetic bioluminescent photoprotein variants: simultaneous dual-analyte assay in a single well employing time resolution of decay kinetics. Anal Chem 80(22):8470–8476. doi:10.1021/ac801209x
Inouye S, Sato J, Sasaki S, Sahara Y (2011) Streptavidin-aequorin fusion protein for bioluminescent immunoassay. Biosci Biotechnol Biochem 75(3):568–571. doi:10.1271/bbb.100798
Inouye S, Sato J (2012) Purification of histidine-tagged aequorin with a reactive cysteine residue for chemical conjugations and its application for bioluminescent sandwich immunoassays. Protein Expr Purif 83(2):205–210. doi:10.1016/j.pep.2012.04.001
Daunert S, Barrett G, Feliciano JS, Shetty RS, Shrestha S, Smith-Spencer W (2000) Genetically engineered whole-cell sensing systems: coupling biological recognition with reporter genes. Chem Rev 100(7):2705–2738
Feliciano J, Pasini P, Deo SK, Daunert S (2008) Photoproteins as reporters in whole-cell sensing. In: Deo SK (ed) Protein science encyclopedia. Wiley-VCH, New York, pp 131–154
Kozlova O, Zwinderman M, Christofi N (2005) A new short-term toxicity assay using Aspergillus awamori with recombinant aequorin gene. BMC Microbiol 5:40. doi:10.1186/1471-2180-5-40
Zeinoddini M, Khajeh K, Behzadian F, Hosseinkhani S, Saeedinia AR, Barjesteh H (2010) Design and characterization of an aequorin-based bacterial biosensor for detection of toluene and related compounds. Photochem Photobiol 86(5):1071–1075. doi:10.1111/j.1751-1097.2010.00775.x
Rider TH, Petrovick MS, Nargi FE, Harper JD, Schwoebel ED, Mathews RH, Blanchard DJ, Bortolin LT, Young AM, Chen J, Hollis MA (2003) A B cell-based sensor for rapid identification of pathogens. Science 301(5630):213–215. doi:10.1126/science.1084920
Araki N, Iida M, Amino N, Morita S, Ide A, Nishihara E, Ito M, Saito J, Nishikawa T, Katsuragi K, Miyauchi A (2015) Rapid bioassay for detection of thyroid-stimulating antibodies using cyclic adenosine monophosphate-gated calcium channel and aequorin. EurThyroid J 4(1):14–19. doi:10.1159/000371740
Date A, Pasini P, Daunert S (2010) Integration of spore-based genetically engineered whole-cell sensing systems into portable centrifugal microfluidic platforms. Anal Bioanal Chem 398(1):349–356. doi:10.1007/s00216-010-3930-2
Bjerketorp J, Hakansson S, Belkin S, Jansson JK (2006) Advances in preservation methods: keeping biosensor microorganisms alive and active. Curr Opin Biotechnol 17(1):43–49. doi:10.1016/j.copbio.2005.12.005
Date A, Pasini P, Daunert S (2007) Construction of spores for portable bacterial whole-cell biosensing systems. Anal Chem 79(24):9391–9397. doi:10.1021/ac701606g
Date A, Pasini P, Daunert S (2010) Fluorescent and bioluminescent cell-based sensors: strategies for their preservation. Adv Biochem Eng Biotechnol 117:57–75. doi:10.1007/10_2009_22
Date A, Pasini P, Sangal A, Daunert S (2010) Packaging sensing cells in spores for long-term preservation of sensors: a tool for biomedical and environmental analysis. Anal Chem 82(14):6098–6103. doi:10.1021/ac1007865
Weissleder R (2001) A clearer vision for in vivo imaging. Nat Biotechnol 19(4):316–317. doi:10.1038/86684
Frangioni JV (2003) In vivo near-infrared fluorescence imaging. Curr Opin Chem Biol 7(5):626–634
Gao X, Cui Y, Levenson RM, Chung LW, Nie S (2004) In vivo cancer targeting and imaging with semiconductor quantum dots. Nat Biotechnol 22(8):969–976. doi:10.1038/nbt994
Lam CW, James JT, McCluskey R, Arepalli S, Hunter RL (2006) A review of carbon nanotube toxicity and assessment of potential occupational and environmental health risks. Crit Rev Toxicol 36(3):189–217
Yu WW, Chang E, Drezek R, Colvin VL (2006) Water-soluble quantum dots for biomedical applications. Biochem Biophys Res Commun 348(3):781–786. doi:10.1016/j.bbrc.2006.07.160
Liu Z, Davis C, Cai W, He L, Chen X, Dai H (2008) Circulation and long-term fate of functionalized, biocompatible single-walled carbon nanotubes in mice probed by Raman spectroscopy. Proc Natl Acad Sci USA 105(5):1410–1415. doi:10.1073/pnas.0707654105
Bakayan A, Domingo B, Miyawaki A, Llopis J (2014) Imaging Ca activity in mammalian cells and zebrafish with a novel red-emitting aequorin variant. Eur J Physiol, Pflugers Archiv. doi:10.1007/s00424-014-1639-3
Grinstead KM (2015) Aequorin mutants with site-specifically incorporated non-natural amino acids for biomedical applications. Dissertation, University of Miami, Open Access Dissertations
Mekahli D, Bultynck G, Parys JB, De Smedt H, Missiaen L (2011) Endoplasmic-reticulum calcium depletion and disease. Cold Spring Harbor Perspect Biol 3(6). doi:10.1101/cshperspect.a004317
Sama DM, Norris CM (2013) Calcium dysregulation and neuroinflammation: discrete and integrated mechanisms for age-related synaptic dysfunction. Ageing Res Rev 12(4):982–995. doi:10.1016/j.arr.2013.05.008
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Grinstead, K., Joel, S., Zingg, JM., Dikici, E., Daunert, S. (2015). Enabling Aequorin for Biotechnology Applications Through Genetic Engineering. In: Thouand, G., Marks, R. (eds) Bioluminescence: Fundamentals and Applications in Biotechnology - Volume 3. Advances in Biochemical Engineering/Biotechnology, vol 154. Springer, Cham. https://doi.org/10.1007/10_2015_336
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