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Image Formation in Fluorescence Microscopy

Three-dimensional mathematical model

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From Cells to Proteins: Imaging Nature across Dimensions

Part of the book series: NATO Security through Science Series ((NASTB))

Abstract

In this chapter we will discuss the properties of three-dimensional image formation in an optical fluorescence microscope. An image is blurred and distorted by noise during its formation and acquisition. This distortion hides fine details in the image hampering both the visual and the quantitative analysis of the image. In order to appreciate the fundamental limitations of the resolution and image formation properties of an optical fluorescence microscope, it is necessary to begin by discussing the foundations of diffraction theory. Using this theory, the wave description and the quantum nature of light it is possible to derive a model for the image formation in a general epi-fluorescence microscope and discuss the conditions under which a fluorescence microscope can be modeled as a linear translation invariant system. This means that the optical system is completely described by its Point Spread Function (PSF). The image formations in a Confocal Laser Scanning Microscope (CLSM), in a Wide-Field Microscope and in a Two- Photon Excitation (TPE) Microscope are derived as limited case of the general epi-fluorescence microscope.

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7. References

  1. Diaspro, A., ed. Confocal and Two-photon Microscopy. 2002, John Wiley & sons.: New York.

    Google Scholar 

  2. Bertero, M. and P. Boccacci, Introduction to inverse problems in imaging. 1998, Bristol, UK: IOP Publishing.

    Book  Google Scholar 

  3. Bonetto, P. and G. Vicidomini, Three-Dimensional Microscopy Migrates to the Web with “PowerUp Your Microscope”. Microscopy Research and Technique, 2004. 64(2): p. 196–203.

    Article  PubMed  Google Scholar 

  4. Born, M. and E. Wolf, Principle of Optics. Sixth ed. 1980, Oxford: Cambridge University Press.

    Google Scholar 

  5. Goodman, J.W., Introduction to Fourier optics. 1968, San Francisco: McGraw Hill.

    Google Scholar 

  6. Vliet, L.J.v., et al., Image Detectors for Digital Image Microscopy, in Imaging, Morphometry, Fluorometry and Motility Techniques and Applications, Modern Microbiological Methods, J.W. Sons, Editor. 1998: Chichester (UK). p. 37–64.

    Google Scholar 

  7. Gibson, S.F. and F. Lanni, Experiment test of an analytical model of aberration in an oilimmersion objective lens used in three-dimensional light microscopy. Journal of the optical Society of America A, 1991. 8(10): p. 1601–1613.

    Article  CAS  Google Scholar 

  8. Wilson, T. and C. Sheppard, Theory and Practice of Scanning Optical Microscopy. Second Edition ed. 1985, London: Academic Press.

    Google Scholar 

  9. Lakowicz, J.R., Principles of Fluorescence Spectroscopy. Second Edition ed. 1999, New York: Kluwer Academic / Pleum Publisher.

    Google Scholar 

  10. Gauderon, R. and C.J.R. Shepard, Effect of a finite-size pinhole on noise performance in single-, two-, and three photon confocal fluorescence microscopy. Applied Optics, 1999. 38(16): p. 3562–3565.

    Article  PubMed  CAS  Google Scholar 

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© 2005 Springer

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Vicidomini, G. (2005). Image Formation in Fluorescence Microscopy. In: Evangelista, V., Barsanti, L., Passarelli, V., Gualtieri, P. (eds) From Cells to Proteins: Imaging Nature across Dimensions. NATO Security through Science Series. Springer, Dordrecht . https://doi.org/10.1007/1-4020-3616-7_18

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