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Transcriptional and Post-Transcriptional Regulation of the Rod cGMP-Phosphodiesterase β-Subunit Gene

Recent advances and current concepts

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Part of the book series: Advances in Experimental Medicine and Biology ((volume 572))

Abstract

In eukaryotic cells, gene expression is controlled at multiple levels that could be grouped in two large categories, transcriptional and post-transcriptional regulatory events. Regulation of gene expression at the level of transcription is the major determinant of the initiation of protein synthesis and of the level of gene expression. However, there is increasing evidence of the important contribution of the post-transcriptional control mechanisms in determining and fine-tuning the final amount of the synthesized protein product. Post-transcriptional regulatory mechanisms could be grouped into events that modulate mRNA stability, localization, translation, as well as protein stability and modifications.

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References

  • Batni, S., Mani, S. S., Schlueter, C., Ji, M., and Knox, B. E., 2000, Xenopus rod photoreceptor: model for expression of retinal genes. Methods Enzymol 316:50–64.

    Article  PubMed  CAS  Google Scholar 

  • Bessant, D. A., Payne, A. M., Mitton, K. P., Wang, Q. L., Swain, P. K., Plant, C., Bird, A. C., Zack, D. J., Swaroop, A., and Bhattacharya, S. S., 1999, A mutation in NRL is associated with autosomal dominant retinitis pigmentosa. Nat Genet 21:355–356.

    Article  PubMed  CAS  Google Scholar 

  • Bowes, C., Li, T., Danciger, M., Baxter, L. C., Applebury, M. L., and Farber, D. B., 1990, Retinal degeneration in the rd mouse is caused by a defect in the β-subunit of rod cGMP-phosphodiesterase. Nature 347:677–680.

    Article  PubMed  CAS  Google Scholar 

  • Conne, B., Stutz, A., and Vassalli, J.D., 2000, The 3′ untranslated region of messenger RNA: A molecular ‘hotspot’ for pathology?. Nat Med 6:637–641.

    Article  PubMed  CAS  Google Scholar 

  • Day, D.A., and Tuite, M.F., 1998, Post-transcriptional gene regulatory mechanisms in eukaryotes: an overview. J Endocrinol 157:361–371.

    Article  PubMed  CAS  Google Scholar 

  • Di Polo, A., Rickman, C. B., and Farber, D. B., 1996, Isolation and initial characterization of the 5′ flanking region of the human and murine cyclic guanosine monophosphate-phosphodiesterase beta-subunit genes. Invest Ophthalmol Vis Sci 37:551–560.

    PubMed  Google Scholar 

  • Farber, D. B., Danciger, J. S., and Aguirre, G., 1992, The β-subunit of cyclic GMP-phosphodiesterase mRNA is deficient in canine rod-cone dysplasia 1. Neuron 9:349–356.

    Article  PubMed  CAS  Google Scholar 

  • Farber, D. B. and Danciger, M., 1997, Identification of genes causing photoreceptor degenerations leading to blindness. Curr Opin Neurobiol 7:666–673.

    Article  PubMed  CAS  Google Scholar 

  • Freund, C. L., Gregory-Evans, C. Y., Furukawa, T., Papaioannou, M., Looser, J., Ploder, L., Bellingham, J., Ng, D., Herbrick, J. A., Duncan, A., et al., 1997, Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor. Cell 91:543–553.

    Article  PubMed  CAS  Google Scholar 

  • Freund, C. L., Wang, Q. L., Chen, S., Muskat, B. L., Wiles, C. D., Sheffield, V. C., Jacobson, S. G., McInnes, R. R., Zack, D. J., and Stone, E. M., 1998, De novo mutations in the CRX homeobox gene associated with Leber congenital amaurosis. Nat Genet 18:311–312.

    Article  PubMed  CAS  Google Scholar 

  • Fung, B. K. K., Young, J. H., Yamane, H. K., and Griswold-Prenner, I., 1990, Subunit stoichiometry of retinal rod cGMP phosphodiesterase. Biochemistry 29:2657–2664.

    Article  PubMed  CAS  Google Scholar 

  • Geballe, A.P. and Morris, D.R., 1994, Initiation codons within 5′-leaders of mRNAs as regulators of translation. Trends Biochem Sci 19:159–164.

    Article  PubMed  CAS  Google Scholar 

  • Hagen, G., Muller, S., Beato, M., and Suske, G., 1992, Cloning by recognition site screening of two novel GT box binding proteins: a family of Sp1 related genes. Nucleic Acids Res 20:5519–5525.

    Article  PubMed  CAS  Google Scholar 

  • Haider, N. B., Jacobson, S. G., Cideciyan, A. V., Swiderski, R., Streb, L. M., Searby, C., Beck, G., Hockey, R., Hanna, D. B., Gorman, S., et al., 2000, Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate. Nat Genet 24:127–131.

    Article  PubMed  CAS  Google Scholar 

  • Kozak, M., 1987, At least six nucleotides preceding the AUG initiator codon enhance translation in mammalian cells. J Mol Biol 196:947–950.

    Article  PubMed  CAS  Google Scholar 

  • Kozak, M., 1997, Recognition of AUG and alternative codons is augmented by G in position +4 but is not generally affected by the nucleotides in positions +5 and +6. EMBO J 16:2482–2492.

    Article  PubMed  CAS  Google Scholar 

  • Jackson, R.J. and Standart, N., 1990, Do the poly(A) tail and 3′ untranslated region control mRNA translation? Cell 62:15–24.

    Article  PubMed  CAS  Google Scholar 

  • Lerner, L. E., Gribanova, Y. E., Ji, M., Knox, B. E., and Farber, D. B., 2001, Nrl and Sp nuclear proteins mediate transcription of rod-specific cGMP-phosphodiesterase β-subunit: Involvement of multiple response elements. J Biol Chem 276:34999–35007.

    Article  PubMed  CAS  Google Scholar 

  • Lerner, L. E., Gribanova, Y. E., Whitaker, L., Knox, B. E., and Farber, D. B., 2002, The rod cGMP-phosphodiesterase beta-subunit promoter is a specific target for Sp4 and is not activated by other Sp proteins or CRX. J Biol Chem 277:25877–25883.

    Article  PubMed  CAS  Google Scholar 

  • Pittler, S. J., and Baehr, W., 1991, Identification of a nonsense mutation in the rod photoreceptor cGMP phosphodiesterase β-subunit gene of the rd mouse. Proc Natl Acad Sci USA 88:8322–8326.

    Article  PubMed  CAS  Google Scholar 

  • Piri, N., Yamashita, C.K., Shih, J., Akhmedov, N.B., and Farber, D.B., 2003, Differential expression of rod photoreceptor cGMP-phosphodiesterase alpha and beta subunits: mRNA and protein levels. J Biol Chem 278:36999–37005.

    Article  PubMed  CAS  Google Scholar 

  • Stuart, J.J., Egry L.A., Wong, G.H., and Kaspar, R.L., 2000, The 3′ UTR of human MnSOD mRNA hybridizes to a small cytoplasmic RNA and inhibits gene expression. Biochem Biophys Res Commun 274:641–648.

    Article  PubMed  CAS  Google Scholar 

  • Suber, M. L., Pittler, S., Qin, N., Wright, G., Holcombe, V., Lee, R., Craft, C., Lolley, R., Baehr, W., and Hurwitz, R., 1993, Irish setter dogs affected with rod-cone dysplasia contain a nonsense mutation in the rod cyclic GMP phosphodiesterase β subunit gene. Proc Natl Acad Sci, USA 90:3968–3972.

    Article  PubMed  CAS  Google Scholar 

  • Swain, P. K., Chen, S., Wang, Q. L., Affatigato, L. M., Coats, C. L., Brady, K. D., Fishman, G. A., Jacobson, S. G., Swaroop, A., Stone, E., et al., 1997, Mutations in the cone-rod homeobox gene are associated with the cone-rod dystrophy photoreceptor degeneration. Neuron 19:1329–1336.

    Article  PubMed  CAS  Google Scholar 

  • Wolner, B. S., and Gralla, J. D., 2000, Roles for non-TATA core promoter sequences in transcription and factor binding. Mol Cell Biol 20:3608–3615.

    Article  PubMed  CAS  Google Scholar 

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© 2006 Springer Science+Business Media, Inc.

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Lerner, L.E., Piri, N., Farber, D.B. (2006). Transcriptional and Post-Transcriptional Regulation of the Rod cGMP-Phosphodiesterase β-Subunit Gene. In: Hollyfield, J.G., Anderson, R.E., LaVail, M.M. (eds) Retinal Degenerative Diseases. Advances in Experimental Medicine and Biology, vol 572. Springer, Boston, MA. https://doi.org/10.1007/0-387-32442-9_32

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  • DOI: https://doi.org/10.1007/0-387-32442-9_32

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-0-387-28464-4

  • Online ISBN: 978-0-387-32442-5

  • eBook Packages: MedicineMedicine (R0)

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