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Part of the book series: Lecture Notes in Statistics ((LNS,volume 185))

Summary

Recently Møller, Pettitt, Berthelsen and Reeves [17] introduced a new MCMC methodology for drawing samples from a posterior distribution when the likelihood function is only specified up to a normalising constant. We illustrate the method in the setting of Bayesian inference for Markov point processes; more specifically we consider a likelihood function given by a Strauss point process with priors imposed on the unknown parameters. The method relies on introducing an auxiliary variable specified by a normalised density which approximates the likelihood well. For the Strauss point process we use a partially ordered Markov point process as the auxiliary variable. As the method requires simulation from the “unknown” likelihood, perfect simulation algorithms for spatial point processes become useful.

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References

  1. A.J. Baddeley and R. Turner. Practical maximum pseudolikelihood for spatial point patterns. Australian and New Zealand Journal of Statistics, 42:283–322, 2000.

    Article  MathSciNet  Google Scholar 

  2. K.K. Berthelsen and J. Møller. A primer on perfect simulation for spatial point processes. Bulletin of the Brazilian Mathematical Society, 33:351–367, 2002.

    Article  MathSciNet  Google Scholar 

  3. K.K. Berthelsen and J. Møller. Likelihood and non-parametric Bayesian MCMC inference for spatial point processes based on perfect simulation and path sampling. Scandinavian Journal of Statistics, 30:549–564, 2003.

    Article  Google Scholar 

  4. K.K. Berthelsen and J. Møller. Semi-parametric Bayesian inference for inhomogeneous Markov point processes. In preparation.

    Google Scholar 

  5. J.E. Besag. Some methods of statistical analysis for spatial data. Bulletin of the International Statistical Institute, 47:77–92, 1977.

    MathSciNet  Google Scholar 

  6. N.A.C. Cressie and J.L. Davidson. Image analysis with partially ordered Markov models. Computational Statistics and Data Analysis, 29(1):1–26, 1998.

    Article  MathSciNet  Google Scholar 

  7. N.A.C. Cressie, J. Zhu, A.J. Baddeley and M.G. Nair. Directed Markov point processes as limits of partially ordered Markov models. Methodology and Computing in Applied Probability, 2:5–21, 2000.

    Article  MathSciNet  Google Scholar 

  8. A. Gelman and X.-L. Meng. Simulating normalizing contants: From importance sampling to bridge sampling to path sampling. Statistical Science, 13:163–185, 1998.

    Article  MathSciNet  Google Scholar 

  9. C.J. Geyer. Likelihood inference for spatial point processes. In O. E. Barndorff-Nielsen, W. S. Kendall, and M. N. M. van Lieshout, editors, Stochastic Geometry: Likelihood and Computation, pp. 79–140, Boca Raton, Florida, 1999. Chapman & Hall/CRC.

    Google Scholar 

  10. C.J. Geyer and J. Møller. Simulation procedures and likelihood inference for spatial point processes. Scandinavian Journal of Statistics, 21:359–373, 1994.

    Google Scholar 

  11. O. Häggström, M.N.M. Van Lieshout and J. Møller. Characterisation results and Markov chain Monte Carlo algorithms including exact simulation for some spatial point processes. Bernoulli, 5:641–658, 1999.

    Article  MathSciNet  Google Scholar 

  12. J. Heikkinen and A. Penttinen. Bayesian smoothing in the estimation of the pair potential function of Gibbs point processes. Bernoulli, 5:1119–1136, 1999.

    Article  MathSciNet  Google Scholar 

  13. J.L. Jensen and J. Møller. Pseudolikelihood for exponential family models of spatial point processes. Annals of Applied Probability, 3:445–461, 1991.

    Google Scholar 

  14. F.P. Kelly and B.D. Ripley. A note on Strauss’ model for clustering. Biometrika, 63:357–360, 1976.

    Article  MathSciNet  Google Scholar 

  15. W.S. Kendall and J. Møller. Perfect simulation using dominating processes on ordered spaces, with application to locally stable point processes. Advances in Applied Probability, 32:844–865, 2000.

    Article  MathSciNet  Google Scholar 

  16. M.N.M. van Lieshout. Markov Point Processes and their Applications. Imperial College Press, London, 2000.

    Google Scholar 

  17. J. Møller, A.N. Pettitt, K.K. Berthelsen and R.W. Reeves. An efficient MCMC method for distributions with intractable normalising constants. Research report r-2004-02, Department of Mathematical Sciences, Aalborg University, 2004.

    Google Scholar 

  18. J. Møller and R.P. Waagepetersen. An introduction to simulation-based inference for spatial point processes. In J. Møller, editor, Spatial Statistics and Computational Methods, Lecture Notes in Statistics 173, pp. 143–198. Springer-Verlag, New York, 2003.

    Google Scholar 

  19. J. Møller and R.P. Waagepetersen. Statistical Inference and Simulation for Spatial Point Processes. Chapman and Hall/CRC, 2003.

    Google Scholar 

  20. L. Tierney. Markov chains for exploring posterior distributions. Annals of Statistics, 22:1701–1728, 1994.

    MATH  MathSciNet  Google Scholar 

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Berthelsen, K.K., Møller, J. (2006). Bayesian Analysis of Markov Point Processes. In: Baddeley, A., Gregori, P., Mateu, J., Stoica, R., Stoyan, D. (eds) Case Studies in Spatial Point Process Modeling. Lecture Notes in Statistics, vol 185. Springer, New York, NY. https://doi.org/10.1007/0-387-31144-0_4

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