Abstract
The prokaryotic MutM protein is a trifunctional DNA base excision repair enzyme that removes a wide range of oxidatively damaged bases, especially 8-oxoguanine, (N-glycosylase activity) and cleaves both the 3′- and 5′-phosphodiester bonds of the resulting apurinic/apyrimidinic site (AP lyase activity). This enzyme possesses a zinc finger motif (-Cys-X2-Cys-X16-Cys-X2-Cys-) at the C terminus, which forms a β-hairpin loop. The positively charged Arg247 and Arg253 on the β-hairpin loop interact with the phosphate groups to pinch the backbone of the lesion-containing strand. This feature establishes that the zinc finger motif is essential for binding of MutM to DNA as well as its enzymatic activities.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Dizdaroglu M. Formation of an 8-oxoguanine moiety in deoxyribonucleic acid on γ-irradiation in aqueous solution. Biochemistry 1985; 24:4476–4481.
Wood ML, Dizdaroglu M, Gajewski E et al. Mechanistic studies of ionizing radiation and oxidative mutagenesis: genetic effects of a single 8-hydroxyguanine (7-hydro-8-oxoguanine) residue inserted at a unique site in a viral genome. Biochemistry 1990; 290:7024–7032.
Michaels ML, Miller JH. The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine). J Bacteriol 1992; 174:6321–6325.
Bhagwat M, Gerlt JA. 3′-and 5′-strand cleavage reactions catalyzed by the Fpg protein from Escherichia coli occur via successive beta-and delta-elimination mechanisms, respectively. Biochemistry 1996; 35:659–665.
Hazra TK, Izumi T, Boldogh I et al. Identification and characterization of a human DNA glycosylase for repair of modified bases in oxidatively damaged DNA. Proc Natl Acad Sci USA 2002; 99:3523–3528.
Morland I, Rolseth V, Luna L et al. Human DNA glycosylases of the bacterial Fpg/MutM superfamily: an alternative pathway for the repair of 8-oxoguanine and other oxidation products in DNA. Nucleic Acids Res 2002; 30:4926–4936.
Boiteux S, O’Connor TR, Lederer F et al. Homogeneous Escherichia coli FPG protein. A DNA glycosylase which excises imidazole ring-opened purines and nicks DNA at apurinic/apyrimidinic sites. J Biol Chem 1990; 265:3916–3922.
O’Connor TR, Graves RJ, de Murcia G et al. Fpg protein of Escherichia coli is a zinc finger protein whose cysteine residues have a structural and/or functional role. J Biol Chem 1993; 268:9063–9070.
Buchko GW, Hess NJ, Bandaru V et al. Spectroscopic studies of zinc(II)-and cobalt(II)-associated Escherichia coli formamidopyrimidine-DNA glycosylase: extended X-ray absorption fine structure evidence for a metal-binding domain. Biochemistry 2000; 39:12441–12449.
Tchou J, Michaels ML, Miller JH et al. Function of the zinc finger in Escherichia coli Fpg protein. J Biol Chem 1993; 268:26738–26744.
Wink DA, Laval J. The Fpg protein, a DNA repair enzyme, is inhibited by the biomediator nitric oxide in vitro and in vivo. Carcinogenesis 1994; 15:2125–2129.
Sugahara M, Mikawa T, Kumasaka T et al. Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8. EMBO J 2000; 19:3857–3869.
Fromme JC, Verdine GL. Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM. Nat Struct Biol 2002; 9:544–552.
Scharer OD, Jiricny J. Recent progress in the biology, chemistry and structural biology of DNA glycosylases. Bioessays 2001; 23:270–281.
Sayle R, Milner-White EJ. RASMOL: biomolecular graphics for all. Trends Biochem. Sci 1995; 20:374.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2005 Landes Bioscience/Eurekah.com and Kluwer Academic/Plenum Publishers
About this chapter
Cite this chapter
Masui, R., Nakagawa, N., Kuramitsu, S. (2005). MutM: Single C2C2 Zinc Finger-DNA Interaction. In: Iuchi, S., Kuldell, N. (eds) Zinc Finger Proteins. Molecular Biology Intelligence Unit. Springer, Boston, MA. https://doi.org/10.1007/0-387-27421-9_6
Download citation
DOI: https://doi.org/10.1007/0-387-27421-9_6
Publisher Name: Springer, Boston, MA
Print ISBN: 978-0-306-48229-8
Online ISBN: 978-0-387-27421-8
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)