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4. References
Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J., 1990, Basic local alignment search tool, J Mol Biol. 215:403; http://www.ncbi.nlm.nih.gov/BLAST/.
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J., 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res. 25:3389; http://www.ncbi.nlm.nih.gov/BLAST/.
Attwood, T.K., Blythe, M., Flower, D.R., Gaulton, A., Mabey, J.E., Maudling, N., McGregor, L., Mitchell, A., Moulton, G., Paine, K., and Scordis, P., 2002, PRINTS and PRINTS-S shed light on protein ancestry, Nucleic Acids Res. 30:239; http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/.
Bateman, A., Birney, E., Cerruti, L., Durbin, R., Etwiller, L., Eddy, S.R., Griffiths-Jones, S., Howe, K.L., Marshall, M., and Sonnhammer, E.L.L., 2002, The Pfam protein families database, Nucleic Acids Res. 30:276; http://pfam.wustl.edu/index.html.
Falquet, L., Pagni, M., Bucher, P., Hulo, N., Sigrist, C.J., Hofmann, K., and Bairoch, A., 2002, The PROSITE database, its status in 2002. Nucleic Acids Res. 30:235; http://www.expasy.ch/prosite.
Kim, J., Moriyama, E.N., Warr, C.G., Clyne, P.J., and Carlson, J.R., 2000, Identification of novel multi-transmembrane proteins from genomic databases using quasi-periodic structural properties., Bioinformatics. 16:767.
Letunic, I., Goodstadt, L., Dickens, N.J., Doerks, T., Schultz, J., Mott, R., Ciccarelli, F., Copley, R.R., Ponting, C.P., and Bork, P., 2002, Recent improvements to the SMART domain-based sequence annotation resource, Nucleic Acids Res. 30:242; http://smart.embl-heidelberg.de/.
Engelman, D.M., Steitz, T.A., and Goldman, A., 1986, Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins, Annu. Rev. Biophys. Biophys. Chem. 15:321.
Venables, W.N., and Ripley, B.D., 2002, Modern Applied Statistics with S. Fourth Edition, Springer, New York.
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Moriyama, E.N., Kim, J. (2005). Protein Family Classification with Discriminant Function Analysis. In: Gustafson, J.P., Shoemaker, R., Snape, J.W. (eds) Genome Exploitation. Springer, Boston, MA. https://doi.org/10.1007/0-387-24187-6_9
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DOI: https://doi.org/10.1007/0-387-24187-6_9
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