Abstract
TROSY represents a spectroscopic contribution in a constant pursuit of NMR structures of ever larger proteins, nucleic acids and their complexes. As it was theoretically predicted and proven in practice the most efficient application of TROSY is achieved in combination with the selective or uniform deuteration of biomolecules, in particular proteins. In this way biomolecular particles with the molecular sizes exceeding 100 kDa have now become amenable for high resolution NMR studies. Due to its simplicity and flexibility the TROSY principle has also been integrated into many other NMR applications not necessary targeting extremely large biomolecues. TROSY-based NMR experiments have been developed for the detection and characterization of weak interactions such as scalar couplings across hydrogen bonds and residual dipolar couplings. The use of TROSY in Nuclear Overhauser spectroscopy might significantly facilitate the spectral analysis by suppressing the strong diagonal peaks benefiting studies of a wide range of biomolecules.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Andersson, P., Annila, A., and Otting, G., 1998a, J. Magn. Reson. 133, 364–367.
Andersson, P., Gsell, B., Wipf, B., Senn, H. and Otting, G., 1998b, J. Biomol. NMR. 11, 279–288.
Bax, A., 1994, Curr. Opin. Struct. Biol. 4, 738–744.
Blicharski, J. S., 1967, Phys. Lett. 24, 608–610.
Blicharski, J. S., 1972, Acta Physica Polonica 41, 223–236.
Bodenhausen, G., and Ruben, D. J., 1980, Chem. Phys. Lett, 69, 185–189.
Boisbouvier, J., Brutscher, B., Simorre, J. P., and Marion, D., 1999a, J. Biomol. NMR. 14, 241–252.
Boisbouvier, J., Gans, P., Blackledge, M., Brutscher, B.. and Marion, D., 1999b, J. Am. Chem. Soc. 121, 7700–7701.
Brutscher, B., Boisbouvier, J., Pardi, A., Marion, D., and Simorre, J. P., 1998, J. Am. Chem, Soc. 120, 11845–11851.
Cavanagh, J., Fairbrother, W. J., Palmer, A. G., and Skelton, N. J., 1996, Protein NMR Spectroscopy: Principles and Practice, Academic Press, New York.
Clore, G. M., and Gronenborn, A. M., 1998, Trends Biotechnol. 16, 22–34.
Clubb, R. T., Ferguson, S. B., Walsh, C. T., and Wagner, G., 1994, Biochemistry 33, 2761–2772.
Cordier, F., Dingley, A. J. and Grzesiek, S., 1999, J. Biomol. NMR 13, 175–180.
Cornilescu, G., Hu, J. S., and Bax, A., 1999a, J. Am. Chem. Soc. 121, 2949–2950.
Cornilescu, G., Ramirez, B. E., Frank, M. K., Clore, G. M., Gronenborn, A. M., and Bax, A., 1999b, J. Am. Chem. Soc. 121, 6275–6279.
Cotton, G. J., Ayers, B., Xu, R., and Muir, T. W., 1999, J. Am. Chem. Soc. 121, 1100–1101.
Czisch, M., and Boelens, R., 1998, J. Magn. Reson. 134, 158–160.
Dingley, A. J., and Grzesiek, S., 1998, J. Am. Chem. Soc. 120, 8293–8297.
Dingley, A. J., Masse, J. E., Peterson, R. D., Barfield, M., Feigon, J., and Grzesiek, S., 1999, J. Am. Chem. Soc. 121, 6019–6027.
Eletsky, A., Kienhofer, A., and Pervushin, K., 2001, J. Biomol. NMR 20, 177–180.
Ernst, R. R., Bodenhausen, G., and Wokaun, A., 1987, The Principles of Nuclear Magnetic Resonance in One and Two Dimensions, Clarendon, Oxford.
Farmer, B. T., and Venters, R. A., 1995, J. Am. Chem. Soc. 117, 4187–4188.
Farmer, B. T., and Venters, R. A., 1996, J. Biomol. NMR 7, 59–71.
Fiala, R., Czernek, J., and Sklenar, V., 2000, J. Biomol. NMR 16, 291–302.
Gardner, K. H., and Kay, L. E., 1998, Annv. Rev. Biophys. Biomolec. Struct. 27, 357–406.
Gardner, K. H., Konrat, R., Rosen, M. K., and Kay, L. E., 1996, J. Biomol. NMR 8, 351–356.
Gardner, K. H., Rosen, M. K., and Kay, L. E., 1997, Biochemistry 36, 1389–1401.
Gardner, K. H., Zhang, X. C., Gehring, K., and Kay, L. E., 1998, J. Am. Chem. Soc. 120, 11738–11748.
Gerald, R., Bernhard, T., Haeberlen, U., Rendell, J., and Opella, S., 1993, J. Am. Chem. Soc. 115,777–782.
Goldman, M., 1984, J. Magn. Reson. 60, 437–452.
Goto, N. K., Gardner, K. H., Mueller, G. A., Willis, R. C., and Kay, L. E., 1999, J. Biomol. NMR 13, 369–374.
Griffey, R. H, and Redfield, A. G., 1987, Quart. Rev. Biophys. 19, 51–82.
Grzesiek, S., and Bax, A., 1992, J. Magn. Reson. 96, 432–440.
Grzesiek, S., and Bax, A., 1993, J. Am. Chem. Soc. 115, 12593–12594.
Grzesiek, S., and Bax, A., 1999, J. Biomol. NMR 14, 181–184.
Grzesiek, S., Kuboniwa, H., Hinck, A. P., and Bax, A., 1995a, J. Am. Chem. Soc. 117, 5312–5315.
Grzesiek, S., Wingfield, P., Stahl, S., Kaufman, J. D., and Bax, A., 1995b, J. Am. Chem. Soc. 117, 9594–9595.
Gueron, M., Leroy, J. L., and Griffey, J., 1983, J. Am. Chem. Soc. 105, 7262–7266.
Hennig, M., D’Arcy, A., Hampele, I. C., Page, M. G., Oefner, C., and Dale, G. E., 1998, Nat. Struct. Biol. 5, 357–362.
Ikura, M., Kay, L. E., and Bax, A., 1991, J. Biomol. NMR 1, 299–304.
Kaplan, J. I., and Fraenkel, G., 1980, NMR of Chemically Exchanging Systems, Academic Press.
Kay, L. E., and Gardner, K. H., 1997, Curr. Opin. Struct. Biol. 7, 722–731.
Kay, L. E., Keifer, P., and Saarinen, T., 1992, J. Am. Chem. Soc. 114, 10663–10665.
Kelly, M. J. S., Krieger, C., Ball, L. J., Yu, Y. H., Richter, G., Schmieder, P., Bacher, A., and Oschkinat, H., 1999, J. Biomol. NMR 14, 79–83.
Kloiber, K., and Konrat, R., 2000, J. Biomol. NMR 18, 33–42.
Konrat, R., Yang, D. W., and Kay, L. E, 1999, J. Biomol. NMR 15, 309–313.
Kumar, P., and Kumar, A., 1995, J. Magn. Reson. Ser. A 115, 155–164.
Kumar, P., and Kumar, A., 1996, J. Magn. Reson. Ser. A 119, 29–37.
LeMaster, D. M., 1994, Prog. Nucl. Magn. Reson. Spectrosc. 26, 371–419.
Lerche, M. H., Meissner, A., Poulsen, F. M., and Sørensen, O. W., 1999, J. Magn. Reson. 140, 259–263.
Lohr, F., Pfeiffer, S., Lin, Y. J, Hartleib, J., Klimmek, O., and Ruterjans, H, 2000, J. Biomol. NMR 18, 337–346.
Loria, J. P., Rance, M., and Palmer, A., G., 1999a, J. Magn. Reson. 141, 180–184.
Loria, J. P., Rance, M., and Palmer, A. G., 1999b, J. Biomol. NMR 15, 151–155.
Madhu, P. K., Grandori, R., Mandal, P. K., Hohenthanner, K. and Müller, N. 2001, J Biomol NMR. 20, 31–37
Majumdar, A., Kettani, A., and Skripkin, E., 1999a, J. Biomol. NMR 14, 67–70.
Majumdar, A., Kettani, A., Skripkin, E. and Patel, D. J. 1999b, J. Biomol. NMR 15, 207–211.
Marion, D., Ikura, M., Tschudin, R., and Bax, A., 1989, J. Magn. Reson. 85, 393–399.
Mayne, C. L., and Smith, S. A., Eds., 1996, Encyclopedia of NMR: Relaxation Processes in Coupled Spin Systems. Vol. 6. Encyclopedia of NMR. Edited by Grant, D. M., and Harris, R. K., New York: Wiley.
McCallum, S. A., Hitchens, T. K, and Rule, G. S., 1999, J. Mol. Biol. 285, 2119–2132.
McCoy, M. A., and Mueller, L., 1992, J. Am. Chem. Soc. 114, 2108–2112.
Meissner, A., Schulte-Herbruggen, T., Briand, J., and Sørensen, O. W., 1998, Mol. Phys. 95, 1137–1142.
Meissner, A., and Sørensen, O. W., 1999a, J. Magn. Reson. 139, 447–450.
Meissner, A., and Sørensen, O. W., 1999b, J. Magn. Reson. 140, 499–503.
Meissner, A., and Sørensen, O. W., 2000, J. Magn. Reson. 142, 195–198.
Muir, T. W., Sondhi, D., and Cole, P. A., 1998, Proc. Natl. Acad. Sci. USA 95, 6705–6710.
Otomo, T., Ito, N., Kyogoku, Y., and Yamazaki, T., 1999a, Biochemistry 38, 16040–16044.
Otomo, T., Teruya, K., Uegaki, K., Yamazaki, T., and Kyogoku, Y., 1999b, J. Biomol. NMR 14, 105–114.
Ottiger, M., Zerbe, O., Guntert, P., and Wüthrich, K., 1997, J. Mol. Biol. 272, 64–81.
Pellecchia, M., Sebbel, P., Hermanns, U., Wüthrich, K., and Glockshuber, R., 1999, Nat. Struct. Biol. 6, 336–339.
Permi, P., Heikkinen, S., Kilpelainen, I., and Annila, A., 1999, J. Magn. Reson. 140, 32–40.
Pervushin, K., 2001, J. Biomol. NMR. 20, 275–285.
Pervushin, K., Braun, D., and Wüthrich, K., 2000a, J. Biomol. NMR 17, 195–202.
Pervushin, K, Fernandez, C., Riek, R., Ono, A., Kainosho, M., and Wüthrich, K, 2000b, J. Biomol. NMR 16, 39–46.
Pervushin, K., Ono, A., Fernandez, C., Szyperski, T., Kainosho, M., and Wüthrich, K., 1998a, Proc. Natl. Acad. Sci. U. S. A. 95, 14147–14151.
Pervushin, K., Riek, R., Wider, G., and Wüthrich, K., 1997, Proc. Natl. Acad. Sci. U. S. A. 94, 12366–12371.
Pervushin, K., Riek, R., Wider, G., and Wüthrich, K., 1998b, J. Am. Chem. Soc. 120, 6394–6400.
Pervushin, K., Wider, G., Riek, R., and Wüthrich, K., 1999, Proc. Natl. Acad. Sci. U. S. A. 96, 9607–9612.
Pervushin, K., Wider, G., and Wüthrich, K., 1998c, J. Biomol. NMR 12, 345–348.
Pervushin, K. V., 2000, Q. Rev. Biophys. 33, 161–197.
Piotto, M., Saudek, V., and Sklenar, V., 1992, J. Biomol. NMR 2, 661–665.
Platzer, N., Buisson, J. P., and Demerseman, P., 1992, J. Heterocycl. Chem. 29, 1149–1153.
Ramamoorthy, A., Wu, C. H., and Opella, S. J., 1997, J. Am. Chem. Soc. 119, 10479–10486.
Rance, M., 1988, J. Am. Chem. Soc. 110, 1973–1974.
Rance, M., Loria, J. P., and Palmer, A. G., 1999, J. Magn. Reson. 136, 92–101.
Riek, R., Pervushin, K., Fernandez, C., Kainnosho, M., and Wüthrich, K., 2001, J. Am. Chem. Soc. 123, 658–64.
Riek, R., Wider, G., Pervushin, K., and Wüthrich, K., 1999, Proc. Natl. Acad. Sci. U.S.A. 96, 4918–1923.
Roberts, J. E., Harbison, G. S., Munowitz, M. G., Herzfeld, J., and Griffin, R. G., 1987, J. Am. Chem. Soc. 109, 4163–4169.
Rosen, M. K., Gardner, K. H., Willis, R. C., Parris, W. E., Pawson, T., and Kay, L. E., 1996, J. Mol. Biol. 263, 627–636.
Salzmann, M., Pervushin, K., Wider, G., Senn, H., and Wüthrich, K., 1998, Proc. Natl. Acad. Sci. U.S.A. 95, 13585–13590.
Salzmann, M., Pervushin, K., Wider, G., Senn, H., and Wüthrich, K., 1999a, J. Biomol. NMR 14, 85–88.
Salzmann, M., Pervushin, K., Wider, G., Senn, H., and Wüthrich, K., 2000, J. Am. Chem. Soc. 122, 7543–7548.
Salzmann, M., Wider, G., Pervushin, K., Senn, H., and Wüthrich, K., 1999b, J. Am. Chem. Soc. 121, 844–848.
Salzmann, M., Wider, G., Pervushin, K., and Wüthrich, K., 1999c, J. Biomol. NMR 15, 181–184.
Sandstrom, J., 1982, Dynamic NMR Spectroscopy, Academic Press.
Scheurer, C., and Bruschweiler, R., 1999, J. Am. Chem. Soc. 121, 8661–8662.
Schulte-Herbruggen, T., Briand, J., Meissner, A., and Sørensen, O. W., 1999, J. Magn. Reson. 139, 443–446.
Shaka, A. J., Keeler, J., and Freeman, R., 1983a, J. Magn. Reson. 53,313–340.
Shaka, A. J., Keeler, J., Frenkiel, T., and Freeman, R., 1983b, J. Magn. Reson. 52, 335–338.
Shan, X., Gardner, K. H., Muhandiram, D. R., Rao, N. S., Arrowsmith, C. H., and Kay, L. E., 1996, J. Am. Chem. Soc. 118, 6570–6579.
Shimizy, H., 1964, J. Phys. Chem. 40, 3357–3364.
Sørensen, M. D., Meissner, A., and Sørensen, O. W., 1997, J. Biomol. NMR 10, 181–186.
Sørensen, O. W., Eich, G. W., Levitt, M. H., Bodenhausen, G., and Ernst, R. R., 1983, Prog. Nucl. Magn. Reson. Spectrosc. 16, 163–192.
Takahashi, H., Nakanishi, T., Kami, K., Arata, Y., and Shimada, I., 2000, Nat. Struct. Biol. 7, 220–223.
Talluri, S., and Wagner, G., 1996, J. Magn. Reson. Ser. B 112, 200–205.
Tessari, M., Mulder, F. A. A., Boelens, R., and Vuister, G. W., 1997a, J. Magn. Reson. 127, 128–133.
Tessari, M., Vis, H., Boelens, R, Kaptein, R., and Vuister, G. W., 1997b, J. Am. Chem. Soc. 119, 8985–8990.
Tessari, M., and Vuister, G. W., 2000, J. Biomol. NMR 16, 171–174.
Tjandra, N., and Bax, A., 1997a, Science 278, 1111–1114.
Tjandra, N., and Bax, A., 1997b, J. Am. Chem. Soc. 119, 8076–8082.
Veeman, W. S., 1984, Prog. NMR Spectrosc. 16, 193–235.
Vold, R. R., and Vold, R. L., 1975, J. Chem. Phys. 64, 320–332.
Vold, R. R., and Vold, R. L., 1978, Prog. NMR Spectrosc. 12, 79–133.
Vuister, G. W., and Bax, A., 1992, J. Magn. Reson. 98, 428–435.
Wagner, G., 1993a, Curr. Opin. Struct. Biol. 3, 748–754.
Wagner, G., 1993b, J. Biomol NMR 3, 375–385.
Wang, Y. X., Jacob, J., Cordier, F., Wingfield, P., Stahl, S. J., Lee-Huang, S., Torchia, D., Weigelt, J., 1998, J. Am. Chem. Soc. 120, 10778–10779.
Wider, G., 1998, Prog. Nucl. Magn. Reson. Spectrosc. 32, 193–275.
Wider, G., and Wüthrich, K., 1999, Curr. Opin. Struct. Biol. 9, 594–601.
Wohnert, J., Dingley, A. J, Stoldt, M., Gorlach, M., Grzesiek, S., and Brown, L. R., 1999, Nucleic Acids Res. 27, 3104–3110.
Wu, C. H., Ramamoorthy, A., Gierasch, L. M., and Opella, S. J. 1995, J. Am. Chem. Soc. 117, 6148–6149.
Wüthrich, K., 1986, NMR of Proteins and Nucleic Acids, Wiley, New York.
Wüthrich, K, 1998, Nat. Struct. Biol. 5, 492–495.
Wüthrich, K., Spitzfaden, C., Memmert, K., Widmer, H., and Wider, G., 1991, FEES Lett. 285, 237–247.
Xu, R., Ayers, B., Cowburn, D., and Muir, T. W., 1999, 96, 388–93.
Yamazaki, T., Lee, W., Arrowsmith, C. H., Muhandiram, D. R., and Kay, L. E., 1994a. J. Am. Chem. Soc. 116, 11655–11666.
Yamazaki, T., Lee, W., Revington, M., Mattiello, D. L., Dahlquist, F. W., Arrowsmith, C. H., and Kay, L. E, 1994b, J. Am. Chem. Soc. 116, 6464–6465.
Yamazaki, T., Otomo, T., Oda, N., Kyogoku, Y., Uegaki, K., Ito, N., Ishino, Y., and Nakamura, H., 1998, J. Am. Chem. Soc. 120, 5591–5592.
Yang, D. W., and Kay, L. E., 1999a, J. Biomol. NMR 13, 3–10.
Yang, D. W., and Kay, L. E., 1999b, J. Biomol. NMR 14, 273–276.
Yang, D. W., and Kay, L. E., 1999c, J. Am. Chem. Soc. 121, 2571–2575.
Yang, D. W., Venters, R. A., Mueller, G. A., Choy, W. Y., and Kay, L. E., 1999, J. Biomol. NMR 14, 333–343.
Zhu, G., Kong, X. M, and Sze, K. H., 1999, J. Biomol. NMR 13, 77–81.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2002 Kluwer Academic Publishers
About this chapter
Cite this chapter
Pervushin, K.V. (2002). Transverse Relaxation Optimized Spectroscopy. In: Krishna, N.R., Berliner, L.J. (eds) Protein NMR for the Millennium. Biological Magnetic Resonance, vol 20. Springer, Boston, MA. https://doi.org/10.1007/0-306-47936-2_1
Download citation
DOI: https://doi.org/10.1007/0-306-47936-2_1
Publisher Name: Springer, Boston, MA
Print ISBN: 978-0-306-47448-4
Online ISBN: 978-0-306-47936-6
eBook Packages: Springer Book Archive