Skip to main content
SpringerLink
Log in
SpringerLink
Log in

Oxygen Dependence of Expression of Cytochrome C and Cytochrome C Oxdaso Genes in S. Cerevisiae

  • Chapter
Oxygen Sensing

Part of the book series: Advances in Experimental Medicine and Biology ((AEMB,volume 475))

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Log in via an institution
Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Amillet, J.-M., Buisson, N. and Labbe-Bois, R. (1995). Positive and negative elements involved in the differential regulation by heme and oxygen of the HEM 13 gene (coproporphyrinogen oxidase) in Saccharomyces cerevisiae. Curr. Genet. 28, 503–511.

    Article  CAS  PubMed  Google Scholar 

  • Boumans, H., Grivell, L.A. and Berden, J.A. (1998). The respiratory chain in yeast behaves as a single functional unit. J. Biol. Chem. 273, 4872–4877.

    Article  CAS  PubMed  Google Scholar 

  • Boy-Marcotte, E., Perrot, M., Bussereau, F., Boucherie, H. and Jacquet, M. (1998). Msn2p and Msn4p control a large number of genes induced at the diauxic transition which are repressed by cyclic AMP in Saccharomyces cerevisiae. J. Bacterial. 180, 1044–1052.

    CAS  Google Scholar 

  • Bunn, H.F. and Poyton, R.O.(1996). Oxygen sensing and molecular adaptation to hypoxia. Physiol. Rev. 76, 839–885.

    CAS  PubMed  Google Scholar 

  • Burke, P.V., Raitt, D.C., Alien, L.A., Kellogg, E.A. and Poyton, R.O. (1997). Effects of oxygen concentration on the expression of cytochrome c and cytochrome c oxidase genes in yeast. J. Biol. Chem. 272,14705–14712.

    CAS  PubMed  Google Scholar 

  • Chantrel, Y., Gaisne, M., Lions, C. and Verdiere, J. (1998). The transcriptional regulator Hap1p (Cyp1p) is essential for anaerobic or heme-deficient growth of Saccharomyces cerevisiae. Genetic and molecular characterization of an extragenic suppressor that encodes a WD repeat protein. Genetics 148, 559–569.

    CAS  PubMed  Google Scholar 

  • Cherry J.M., Ball C., Weng S., Juvik G., Schmidt R., Adler C., Dunn B., Dwight S., Riles L., Mortimer R.K. and Botstein D. (1997). Genetic and physical maps of Saccharomyces cerevisiae. Nature 387(6632 Suppl), 67–73.

    CAS  PubMed  Google Scholar 

  • Defranoux, N., Gaisne, M. and Verdiere, J.(1994). Functional analysis of the zinc cluster domain of the CYP1 (HAP1) complex regulator in heme-sufficient and heme-deficient yeast cells. Mol. Gen. Genet. 242, 699–707.

    Article  CAS  PubMed  Google Scholar 

  • Deckert, J., Perini, R., Balasubramanian, B. and Zitomer, R.S. (1995). Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae. Genetics 139, 1149–1158.

    CAS  PubMed  Google Scholar 

  • DeRisi, J.L., Iyer, R.I. and Brown, P.O. (1997). Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278, 680–686.

    Article  CAS  PubMed  Google Scholar 

  • Evangelista, C.C. Jr., Rodriguez Torres, A.M., Limbach, M.P. and Zitomer, R.S. (1996). Rox3 and Rts1 function in the global stress response pathway in Baker’s yeast. Genetics 142, 1083–1093.

    CAS  PubMed  Google Scholar 

  • Fytlovich, S., Gervais, M., Agrimonti, C. and Guiard, B. (1993). Evidence for an interaction between the CYP1 (HAP1) activator and a cellular factor during heme-dependent transcriptional regulation in the yeast Saccharomyces cerevisiae. EMBO J. 62, 1209–1218.

    Google Scholar 

  • Gancedo, J.M. (1998). Yeast carbon catabolite repression. Microbiol. Mol. Biol. Rev. 62, 334–361.

    CAS  PubMed  Google Scholar 

  • Hodge, M.R., Kim, G., Singh, K. and Cumsky, M.G. (1989). Inverse regulation of the yeast COX5 genes by oxygen and heme. Mol. Cell. Biol. 9, 1958–1964.

    CAS  PubMed  Google Scholar 

  • Hodge, M.R., Singh, K. and Cumsky, M.G. (1990). Upstream activation and repression elements control transcription of the yeast COX5b gene. Mol. Cell. Biol. 10, 5510–5520.

    CAS  PubMed  Google Scholar 

  • Hodges, P.E., McKee, A.H.Z., Davis, B.P., Payne, W.E. and Garrels, J.I. (1999). Yeast Protein Database(YPD): a model for the organization and presentation of genome-wide functional data. Nuc. Acids Res. 27, 9–73.

    Google Scholar 

  • Iborra, F., Francingues, M.-C. and Cuerineau, M. (1985). Localization of the upstream regulatory sites of yeast iso2-cytochrome c gene. Mol. Gen. Genet. 199, 117–122.

    Article  CAS  PubMed  Google Scholar 

  • Keng, T. (1992). HAP1 and ROX1 form a regulatory pathway in the repression of HEM13 transcription in Saccharomyces cerevisiae. Mol. Cell. Biol. 12, 2616–2623.

    CAS  PubMed  Google Scholar 

  • Kwast, K.E., Burke, P.V. and Poyton, R.O. (1998). Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast. J. Exp. Biol. 201, 1177–1195.

    CAS  PubMed  Google Scholar 

  • Kwast, K.E., Burke, P.V., Staahl, B.T. and Poyton, R.O. (1999). Oxygen sensing in yeast: Evidence for the involvement of the respiratory chain in regulating the transcription of a subset of hypoxic genes. Proc. Nat. Acad. Sci. USA 96, 5446–5451.

    Article  CAS  PubMed  Google Scholar 

  • Labbe-Bois, R. and Labbe, P. (1990). Tetrapyrrole and heme biosynthesis in the yeast Saccharomyces cerevisiae. In Biosynthesis of Heine and Chlorophvlls, (ed. H.A. Dailey), pp235–285. New York: McGraw-Hill Pub. Co.

    Google Scholar 

  • Lambert, J.R., Bilanchone, V.W. and Cumsky, M.G. (1994). The ORD1 gene encodes a transcription factor involved in oxygen regulation and is identical to IXR1, a gene that confers cisplatin sensitivity to Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 91, 7345–7349.

    CAS  PubMed  Google Scholar 

  • Lodi, T., Petrochilo, E., Gaisne, M. and Verdiere, J. (1996). Characterization of a promoter mutation in the CYC3 gene of Saccharomyces cerevisiae which cancels regulation by Cyplp (Hap1p) without affecting its binding site. Mol. Gen. Genet. 253, 103–110.

    CAS  PubMed  Google Scholar 

  • Mayer, M.P. and Bukau, B. (1999). Molecular chaperones: the busy life of Hsp90. Curr. Biol. 9, R322–R325.

    Article  CAS  PubMed  Google Scholar 

  • Monod, J. (1947). The phenomenon of enzymatic adaptation. Growth Symp. 11, 223–289.

    CAS  Google Scholar 

  • Pillar, T.M. and Bradshaw, R.E. (1991). Heat shock and stationary phase induce transcription of the Saccharomyces cerevisiae iso-2 cytochrome c gene. Curr. Genet. 20, 185–188.

    Article  CAS  PubMed  Google Scholar 

  • Pinkham, J.L. and Keng, T. (1994). Heme-mediated gene regulation in Saccharomyces cerevisiae. In: Metal Ions in Fungi, (ed. G. Winkelmann and D.R. Winge), pp. 455–501. New York: Marcel Dekker.

    Google Scholar 

  • Pressant, T., Pfeiffer, K. and Guarente, L. (1987). Organization of the regulatory region of the yeast CYC7 gene: multiple factors are involved in regulation. Mol. Cell. Biol. 7, 3252–3259.

    Google Scholar 

  • Schneider, J.C. and Guarente, L. (1991). Vectors for expression of cloned genes in yeast: regulation, overproduction, and underproduction. Meth. Enzymol. 194, 373–388.

    CAS  PubMed  Google Scholar 

  • Trawick, J.D., Kraut, N., Simon, F.R. and Poyton, R.O. (1992). Regulation of yeast COX6 by the general transcription factor ABF1 and separate HAP2 and heme-responsive elements. Mol. Cell. Biol. 12, 2302–2314.

    CAS  PubMed  Google Scholar 

  • Trueblood, C.E., Wright, R.M. and Poyton, R.O. (1988). Differential regulation of the two genes encoding Saccharomyces cerevisiae cytochrome c oxidase subunit V by heme and the HAP2 and REO1 genes. Mol. Cell. Biol. 8, 4537–4540.

    CAS  PubMed  Google Scholar 

  • Verdiere, J., Gaisne, M. and Labbe-Bois, R. (1991). CYP1(HAP1) is a determinant effector of alternative expression of heme-dependent transcription in yeast. Mol. Gen. Genet. 228, 300–306.

    CAS  PubMed  Google Scholar 

  • Wright, C.F. and Zitomer, R.S. (1985). Point mutations implicate repeated sequences as essential elements of the CYC7 negative upstream site in Saccharomyces cerevisiae. Mol. Cell. Biol. 5,2951–2958.

    CAS  PubMed  Google Scholar 

  • Wu, J. and Trumbly, R.J. (1998). Multiple regulatory proteins mediate repression and activation by interaction with the yeast Mig1 binding site. Yeast 14, 985–1000.

    Article  CAS  PubMed  Google Scholar 

  • Yun, D.F. and Sherman, F. (1996). Degradation of CYC1 mRNA in the yeast Saccharomyces cerevisiae does not require translation. Proc. Natl. Acad. Sci. USA 93, 8895–8900.

    Article  CAS  PubMed  Google Scholar 

  • Zhang, L., Hach, A. and Wang, C. (1998). Molecular mechanism governing heme signaling in yeast: a higher-order complex mediates heme regulation of the transcriptional activator HAP1. Mol. Cell. Biol. 18, 3819–3828.

    CAS  PubMed  Google Scholar 

  • Zitomer, R.S., Carrico, P. and Deckert, J. (1997a). Regulation of hypoxic gene expression in yeast. Kidney Internat. 51, 507–513.

    CAS  Google Scholar 

  • Zitomer, R.S., Kastanoitis, A.J., Deckert, J. and Khalaf, R.A. (1999). Regulation of gene expression by hypoxia in yeast. In: Oxygen Sensing: Molecule to Man (ed. S. Lahiri and N. Probhakar). New York: Plenum.

    Google Scholar 

  • Zitomer, R.S., Limbach, M.P., Rodriguez-Torres, A.M., Balasubramanian, B., Deckert, J. and Snow, P.M. (1997b). Approaches to the study of Rox1 repression of the hypoxic genes in the yeast Saccharomyces cerevisiae. Methods 11, 279–288.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Department of Molecular and Integrative Physiology, University of Illinois, Urbana, IL

    Patricia V. Burke & Kurt E. Kwast

Authors
  1. Patricia V. Burke
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Kurt E. Kwast
    View author publications

    You can also search for this author in PubMed Google Scholar

Editor information

Editors and Affiliations

  1. University of Pennsylvania Medical Center, Philadelphia, Pennsylvania

    Sukhamay Lahiri  & Robert E. Forster II  & 

  2. Case Western Reserve University, Cleveland, Ohio

    Naduri R. Prabhakar

Rights and permissions

Reprints and permissions

Copyright information

© 2002 Kluwer Academic Publishers

About this chapter

Cite this chapter

Burke, P.V., Kwast, K.E. (2002). Oxygen Dependence of Expression of Cytochrome C and Cytochrome C Oxdaso Genes in S. Cerevisiae. In: Lahiri, S., Prabhakar, N.R., Forster, R.E. (eds) Oxygen Sensing. Advances in Experimental Medicine and Biology, vol 475. Springer, Boston, MA. https://doi.org/10.1007/0-306-46825-5_19

Download citation

  • DOI: https://doi.org/10.1007/0-306-46825-5_19

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-0-306-46367-9

  • Online ISBN: 978-0-306-46825-4

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics

Search

Navigation