This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsPreview
Unable to display preview. Download preview PDF.
References
Abril, J.F. and Guigó, R. (2000). gff2ps: visvalizing genomic annotations, Bioinformatics, in press.
Altschul, S. and Gish, W. (1996). Local alignment statistics. Methods Enzymol., 266:460–480.
Altschul, S.F., Gish, W., Miller, W., Myers, E., and Lipman, D. (1990). Basic local alignment search tool. Journal of Molecular Biology, 215:403–410.
Boguski, M., Lowe, T., and Tolstoshev, C. (1993). dbest, database of “expressed sequence tags”. Nature Genetics, 4:332–333.
Boguski, M. and Schuler, G. (1995). Establishing a human transcript map. Nature Genetics, 10:369–371.
Burset, M. and Guigó, R. (1996). Evaluationofgene structure predictionprograms. Genomics, 34:353–357.
The C. Elegans Sequencing Consortium (1998). Genome sequence of the nematode c.elegans: A platform for investigating biology. Science, 282:2012–2018.
Claverie, J.-M. and States, D. (I993). Information enhancement methods for large scale sequence analysis. Comput. Chem., 17:191–201.
Gish, W. and States, D. (1993). Identification of protein coding regions by database similarity search. Nature Genetics, 3:266–272.
Guigó, R. (1997). Computational gene identification: An open problem. Computers and Chemistry, 21:215–222.
Hillier, L. et al. (1996). Generation and analysis of 280,000 human expressed sequence tags. Genome Research, 6:807–828.
Mironov, A.A., Fickett, J.W., and Gelfand, M.S. (1999). Frequent alternative splicing of human genes. Genome Research, 9:1288–1293.
Wolfsberg, T.G. and Landsman, D. (1997). A comparison of expressed sequence tags (ests) to human genomic sequences. Nucleic Acid Research, 25:1626–1632.
Wootton, J. and Federhen, S. (1993). Statistics of local complexity in amino acid sequences and sequence database. Computers in Chemistry, 17:149–163.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2002 Kluwer Academic Publishers
About this chapter
Cite this chapter
Guigó, R., Burset, M., Agarwal, P., Abril, J.F., Smith, R.F., Fickett, J.W. (2002). Sequence Similarity Based Gene Prediction. In: Suhai, S. (eds) Genomics and Proteomics. Springer, Boston, MA. https://doi.org/10.1007/0-306-46823-9_8
Download citation
DOI: https://doi.org/10.1007/0-306-46823-9_8
Publisher Name: Springer, Boston, MA
Print ISBN: 978-0-306-46312-9
Online ISBN: 978-0-306-46823-0
eBook Packages: Springer Book Archive