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Defining Drug Interactions with the Viral Membrane Protein Vpu from HIV-1

  • V. Lemaitre
  • C. G. Kim
  • D. Fischer
  • Y. H. Lam
  • A. Watts
  • W. B. Fischer
Chapter
Part of the Protein Reviews book series (PRON, volume 1)

Abstract

The replication of HIV-1 is strongly enhanced by a small membrane protein called virus protein U (Vpu). Vpu achieves its task by (a) interacting with CD4, the HIV-1 receptor, and (b) by amplifying particle release at the site of the plasma membrane. While the first role is due to interactions of the cytoplasmic site of Vpu with CD4, the second role may be due to ion channel activity caused by the self-assembly of the protein. Recently, a blocker has been proposed which abolishes channel activity. In this chapter, the mechanism of blocking is described using computational methods, including a brief overview of other viral ion channel blockers.

Keywords

Human Immunodeficiency Virus Type Molecular Dynamics Simulation Guanidinium Group Root Mean Square Fluctuation Steer Molecular Dynamics 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Kluwer Academic/Plenum Publishers, New York 2005

Authors and Affiliations

  • V. Lemaitre
    • 1
    • 2
  • C. G. Kim
    • 1
  • D. Fischer
    • 1
  • Y. H. Lam
    • 1
  • A. Watts
    • 1
  • W. B. Fischer
    • 1
    • 3
  1. 1.Biomembrane Structure Unit, Department of BiochemistryOxford UniversityOxfordUK
  2. 2.BioAnalytical Science DepartmentNestec S.A.Lausanne 26Switzerland
  3. 3.Bionanotechnology Interdisciplinary Research Consortium, Clarendon Laboratory, Department of PhysicsOxford UniversityOxfordUK

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