Abstract
One amongst the most deadly diseases in the world, Malaria remains a real flail in Sub-saharan Africa. In underdeveloped countries, e.g. Senegal, such a situation is acute due to the lack of high quality healthcare services and well-formed persons able to perform accurate diagnosis of diseases that patients suffer from. This requires to set up automated tools which will help medical actors in their decision making process. In this paper, we present first steps towards an efficient way to automatically diagnosis an occurence or not of Malaria based on patient signs and symptoms, and the outcome from the quick diagnosis test. Our prediction approach is built on the logistic regression function. First experiments on a real world patient dataset collected in Senegal, as well as a semi-synthetic dataset, show promising performance results regarding the effectiveness of the proposed approach.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Openrefine. http://openrefine.org/. Accessed 30 Oct 2018
Programme national de lutte contre le paludisme. http://www.pnlp.sn/. Accessed 15 Jan 2019
Python implementation of missforest. https://pypi.org/project/predictive_imputer/. Accessed 31 Oct 2018
Adimi, F., Soebiyanto, R.P., Safi, N., Kiang, R.: Towards malaria risk prediction in Afghanistan using remote sensing. Malaria J. 9(1), 125 (2010)
Aminot, I., Damon, M.: The use of logistic regression in the analysis of data concerning good medical practice. Rev. Med. Assur. Mal. 33(2), 143–157 (2002)
Aly, A.S., Vaughan, A.M., Kappe, S.H.: Malaria parasite development in the mosquito and infection of the mammalian host. Ann. Rev. Microbiol. 63, 195–221 (2009)
Bbosa, F., Wesonga, R., Jehopio, P.: Clinical malaria diagnosis: rule-based classification statistical prototype. SpringerPlus 5(1), 939 (2016)
Chiroma, H., et al.: Malaria severity classification through Jordan-Elman neural network based on features extracted from thick blood smear. Neural Netw. World 25(5), 565 (2015)
Daz, G., Gonzlez, F.A., Romero, E.: A semi-automatic method for quantification and classification of erythrocytes infected with malaria parasites in microscopic images. J. Biomed. Inf. 42(2), 296–307 (2009)
Dua, S., Acharya, U.R., Dua, P.: Machine Learning in Healthcare Informatics. Springer Publishing Company, Incorporated (2013)
Ferguson, H.M., Mackinnon, M.J., Chan, B.H., Read, A.F.: Mosquito mortality and the evolution of malaria virulence. Evolution 57(12), 2792–2804 (2003)
Hosmer, D.W., Lemeshow, S.: Applied Logistic Regression. Wiley (2000)
Kunwar, S.: Malaria detection using image processing and machine learning. ArXiv e-prints. January 2018
Kusumasari, T.F., Fitria: data profiling for data quality improvement with openrefine. In: 2016 International Conference on Information Technology Systems and Innovation (ICITSI), pp. 1–6, October 2016
Lemaître, G., Nogueira, F., Aridas, C.K.: Imbalanced-learn: a Python toolbox to tackle the curse of imbalanced datasets in machine learning. J. Mach. Learn. Res. 18(17), 1–5 (2017)
Preux, P., Odermatt, P., Perna, A., Marin, B., Vergnengre, A.: Qu’est-ce qu’une regression logistique ? Revue des Mal. Respir. 22(1, Part 1), 159–162 (2005)
Rajpurkar, P., Polamreddi, V., Balakrishnan, A.: Malaria likelihood prediction by effectively surveying households using deep reinforcement learning. CoRR abs/1711.09223 (2017)
Robert, C.: Machine learning, a probabilistic perspective. CHANCE 27(2), 62–63 (2014)
Silva, L.O., Zárate, L.E.: A brief review of the main approaches for treatment of missing data. Intell. Data Anal. 18(6), 1177–1198 (2014)
Sokhna, C., et al.: Communicable and non-communicable disease risks at the Grand Magal of Touba: the largest mass gathering in Senegal. Travel Med. Infect. Dis. 19, 56–60 (2017)
Sperandei, S.: Understanding logistic regression analysis. Biochem. Med. 24, 12–18 (2014)
Stekhoven, D.J., Bhlmann, P.: MissForest: non-parametric missing value imputation for mixed-type data. Bioinformatics 28(1), 112–118 (2012)
Swalin, A.: How to handle missing data. https://towardsdatascience.com/how-to-handle-missing-data-8646b18db0d4. Accessed 31 October 2018
Ugwu, C., Onyejegbu, N.L., Obagbuwa, I.C.: The application of machine learning technique for malaria diagnosis. Int. J. Green Comput. 1(1), 68–77 (2010)
Wang, J., Xu, M., Wang, H., Zhang, J.: Classification of imbalanced data by using the smote algorithm and locally linear embedding. In: 2006 8th International Conference on Signal Processing, vol. 3, November 2006
WHO: World malaria report in 2017 (2017)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2019 ICST Institute for Computer Sciences, Social Informatics and Telecommunications Engineering
About this paper
Cite this paper
Mbaye, O., Ba, M.L., Camara, G., Sy, A., Mboup, B.M., Diallo, A. (2019). Towards an Efficient Prediction Model of Malaria Cases in Senegal. In: Bassioni, G., Kebe, C., Gueye, A., Ndiaye, A. (eds) Innovations and Interdisciplinary Solutions for Underserved Areas. InterSol 2019. Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering, vol 296. Springer, Cham. https://doi.org/10.1007/978-3-030-34863-2_15
Download citation
DOI: https://doi.org/10.1007/978-3-030-34863-2_15
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-34862-5
Online ISBN: 978-3-030-34863-2
eBook Packages: Computer ScienceComputer Science (R0)