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Research in Computational Molecular Biology

14th Annual International Conference, RECOMB 2010, Lisbon, Portugal, April 25-28, 2010. Proceedings

  • Bonnie Berger

Part of the Lecture Notes in Computer Science book series (LNCS, volume 6044)

Also part of the Lecture Notes in Bioinformatics book sub series (LNBI, volume 6044)

Table of contents

  1. Front Matter
  2. Sivan Bercovici, Itai Sharon, Ron Y. Pinter, Tomer Shlomi
    Pages 50-64
  3. Salim A. Chowdhury, Rod K. Nibbe, Mark R. Chance, Mehmet Koyutürk
    Pages 80-95
  4. Manfred Claassen, Ruedi Aebersold, Joachim M. Buhmann
    Pages 96-109
  5. Timothy Danford, Robin Dowell, Sudeep Agarwala, Paula Grisafi, Gerald Fink, David Gifford
    Pages 110-122
  6. Constantinos Daskalakis, Sebastien Roch
    Pages 123-137
  7. Jianxing Feng, Wei Li, Tao Jiang
    Pages 138-157
  8. Bjarni V. Halldórsson, Derek Aguiar, Ryan Tarpine, Sorin Istrail
    Pages 158-173
  9. Michael Hirsch, Bernhard Schölkopf, Michael Habeck
    Pages 174-188
  10. Richard Jang, Xin Gao, Ming Li
    Pages 189-207
  11. Kyowon Jeong, Sangtae Kim, Nuno Bandeira, Pavel A. Pevzner
    Pages 208-232
  12. Yoo-Ah Kim, Stefan Wuchty, Teresa M. Przytycka
    Pages 263-280
  13. Geoffrey Koh, David Hsu, P. S. Thiagarajan
    Pages 281-296
  14. Adam Kowalczyk, Justin Bedo, Thomas Conway, Bryan Beresford-Smith
    Pages 297-309
  15. Christos Kozanitis, Chris Saunders, Semyon Kruglyak, Vineet Bafna, George Varghese
    Pages 310-324
  16. Fumei Lam, Charles H. Langley, Yun S. Song
    Pages 325-340
  17. Jonathan Laserson, Vladimir Jojic, Daphne Koller
    Pages 341-356
  18. Seunghak Lee, Eric Xing, Michael Brudno
    Pages 357-368
  19. Navodit Misra, Guy Blelloch, R. Ravi, Russell Schwartz
    Pages 369-383
  20. Laurent Noé, Marta Gîrdea, Gregory Kucherov
    Pages 384-396
  21. Bogdan Paşaniuc, Noah Zaitlen, Eran Halperin
    Pages 397-409
  22. Benedict Paten, Mark Diekhans, Dent Earl, John St. John, Jian Ma, Bernard Suh et al.
    Pages 410-425
  23. Yu Peng, Henry C. M. Leung, S. M. Yiu, Francis Y. L. Chin
    Pages 426-440
  24. Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, William Stafford Noble
    Pages 441-455
  25. Barna Saha, Allison Hoch, Samir Khuller, Louiqa Raschid, Xiao-Ning Zhang
    Pages 456-472
  26. Raheleh Salari, Mathias Möhl, Sebastian Will, S. Cenk Sahinalp, Rolf Backofen
    Pages 473-490
  27. Manu N. Setty, Alexander Gusev, Itsik Pe’er
    Pages 491-505
  28. Fabio Vandin, Eli Upfal, Benjamin J. Raphael
    Pages 506-521
  29. Christian Widmer, Jose Leiva, Yasemin Altun, Gunnar Rätsch
    Pages 522-534
  30. Jianyang Zeng, Pei Zhou, Bruce Randall Donald
    Pages 550-570
  31. Benny Chor, David Horn, Nick Goldman, Yaron Levy, Tim Massingham
    Pages 571-571
  32. Richard Goldstein, Mario dos Reis, Asif Tamuri, Alan Hay
    Pages 572-573
  33. Raluca Gordân, Alexander J. Hartemink, Martha L. Bulyk
    Pages 574-574
  34. Jean-Denis Benazet, Mirko Bischofberger, Eva Tiecke, Alexandre Gonalves, James F. Martin, Aime Zuniga et al.
    Pages 575-576
  35. Saumyadipta Pyne, Xinli Hu, Kui Wang, Elizabeth Rossin, Tsung-I Lin, Lisa Maier et al.
    Pages 577-577
  36. Yonit Halperin, Chaim Linhart, Igor Ulitsky, Ron Shamir
    Pages 578-579
  37. Back Matter

About these proceedings

Introduction

This volume contains the papers presented at RECOMB 2010: the 14th Annual International Conference on Research in Computational Molecular Biology held in Lisbon, Portugal, during April 25–28, 2010. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner, and Michael Waterman. RECOMB 2010 was hosted by INESC-ID and Instituto Superior Tecnico, or- nized by a committee chaired by Arlindo Oliveira and took place at the Int- national Fair of Lisbon Meeting Centre. This year, 36 papers were accepted for presentation out of 176 submissions. The papers presented were selected by the Program Committee (PC) assisted by a number of external reviewers. Each paper was reviewed by three members of the PC, or by external reviewers, and there was an extensive Web-based discussion over a period of two weeks, leading to the ?nal decisions. RECOMB 2010 also introduced a Highlights Track, in which six additional presentations by senior authors were chosen from papers published in 2009. The RECOMB conferenceseriesiscloselyassociatedwiththeJournalofComputational Biology, which traditionally publishes special issues devoted to presenting full versions of selected conference papers.

Keywords

biological networks cognition evolution gene expression genetics genome genomics genotyping molcular sequence analysis molecular evolution protein fingerprinting protein structures regulatory DNA sequencing systems biology

Editors and affiliations

  • Bonnie Berger
    • 1
  1. 1.Computer Science and Artificial Intelligence LaboratoryMassachusetts Institute of TechnologyCambridgeUSA

Bibliographic information

  • DOI https://doi.org/10.1007/978-3-642-12683-3
  • Copyright Information Springer-Verlag Berlin Heidelberg 2010
  • Publisher Name Springer, Berlin, Heidelberg
  • eBook Packages Computer Science
  • Print ISBN 978-3-642-12682-6
  • Online ISBN 978-3-642-12683-3
  • Series Print ISSN 0302-9743
  • Series Online ISSN 1611-3349
  • Buy this book on publisher's site
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