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Introduction to HPC with MPI for Data Science

  • Frank Nielsen

Part of the Undergraduate Topics in Computer Science book series (UTICS)

Table of contents

  1. Front Matter
    Pages i-xxxiii
  2. High Performance Computing (HPC) with the Message Passing Interface (MPI)

    1. Front Matter
      Pages 1-1
    2. Frank Nielsen
      Pages 63-97
    3. Frank Nielsen
      Pages 99-120
    4. Frank Nielsen
      Pages 121-145
    5. Frank Nielsen
      Pages 147-160
  3. High Performance Computing (HPC) for Data Science (DS)

  4. Back Matter
    Pages 261-282

About this book

Introduction

This gentle introduction to High Performance Computing (HPC) for Data Science using the Message Passing Interface (MPI) standard has been designed as a first course for undergraduates on parallel programming on distributed memory models, and requires only basic programming notions.

Divided into two parts the first part covers high performance computing using C++ with the Message Passing Interface (MPI) standard followed by a second part providing high-performance data analytics on computer clusters.

In the first part, the fundamental notions of blocking versus non-blocking point-to-point communications, global communications (like broadcast or scatter) and collaborative computations (reduce), with Amdalh and Gustafson speed-up laws are described before addressing parallel sorting and parallel linear algebra on computer clusters. The common ring, torus and hypercube topologies of clusters are then explained and global communication procedures on these topologies are studied. This first part closes with the MapReduce (MR) model of computation well-suited to processing big data using the MPI framework.

In the second part, the book focuses on high-performance data analytics. Flat and hierarchical clustering algorithms are introduced for data exploration along with how to program these algorithms on computer clusters, followed by machine learning classification, and an introduction to graph analytics. This part closes with a concise introduction to data core-sets that let big data problems be amenable to tiny data problems.

Exercises are included at the end of each chapter in order for students to practice the concepts learned, and a final section contains an overall exam which allows them to evaluate how well they have assimilated the material covered in the book.

Keywords

Data Science Exploratory analytics and knowledge discovery High Performance Computing (HPC) Large-scale data sets and networks Machine learning

Authors and affiliations

  • Frank Nielsen
    • 1
  1. 1.Bâtiment Alan Turing, CS35003École PolytechniquePalaiseauFrance

Bibliographic information

  • DOI https://doi.org/10.1007/978-3-319-21903-5
  • Copyright Information Springer International Publishing Switzerland 2016
  • Publisher Name Springer, Cham
  • eBook Packages Computer Science
  • Print ISBN 978-3-319-21902-8
  • Online ISBN 978-3-319-21903-5
  • Series Print ISSN 1863-7310
  • Series Online ISSN 2197-1781
  • Buy this book on publisher's site
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