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Functional Genomics

Methods and Protocols

  • Michael Kaufmann
  • Claudia Klinger
  • Andreas Savelsbergh

Part of the Methods in Molecular Biology book series (MIMB, volume 1654)

Table of contents

  1. Front Matter
    Pages i-xv
  2. Bioinformatics

    1. Front Matter
      Pages 1-1
    2. Chenhan Zhao, Xiaojun Xu, Shi-Jie Chen
      Pages 3-15
    3. Yongsheng Li, Juan Xu, Tingting Shao, Yunpeng Zhang, Hong Chen, Xia Li
      Pages 17-28
    4. Georgina Stegmayer, Cristian Yones, Laura Kamenetzky, Natalia Macchiaroli, Diego H. Milone
      Pages 29-37
    5. Benjamin Webb, Andrej Sali
      Pages 39-54
    6. Leonardo Magalhães Cruz, Sheyla Trefflich, Vinícius Almir Weiss, Mauro Antônio Alves Castro
      Pages 55-75
  3. DNA Analysis

    1. Front Matter
      Pages 77-77
    2. Takashi Nagano, Steven W. Wingett, Peter Fraser
      Pages 79-97
    3. Suvi K. Härmälä, Robert Butcher, Chrissy H. Roberts
      Pages 135-149
    4. Adrian Michael Mueller, Dennis Breitsprecher, Stefan Duhr, Philipp Baaske, Thomas Schubert, Gernot Längst
      Pages 151-164
    5. Eric Ehrke-Schulz, Maren Schiwon, Claudia Hagedorn, Anja Ehrhardt
      Pages 165-176
  4. RNA Analysis

    1. Front Matter
      Pages 177-177
    2. Patrick P. Weil, Yan Jaszczyszyn, Anne Baroin-Tourancheau, Jan Postberg, Laurence Amar
      Pages 179-196
    3. Alan Van Goethem, Pieter Mestdagh, Tom Van Maerken, Jo Vandesompele
      Pages 197-208
    4. Lena Saal-Bauernschubert, Michael Briese, Michael Sendtner
      Pages 231-241
  5. Protein Analysis

    1. Front Matter
      Pages 243-243
    2. Matias Pasquali, Tommaso Serchi, Sebastien Planchon, Jenny Renaut
      Pages 245-254
    3. Paolo Soffientini, Angela Bachi
      Pages 255-260
    4. Yulin Yuan, Zuan-Tao Lin, Hongting Wang, Xia Hong, Mikala Heon, Tianfu Wu
      Pages 261-269
    5. Yulin Yuan, Hongting Wang, Zuan-Tao Lin, Xia Hong, Mikala Heon, Tianfu Wu
      Pages 271-277
    6. Yulin Yuan, Xia Hong, Zuan-Tao Lin, Hongting Wang, Mikala Heon, Tianfu Wu
      Pages 279-289
    7. Monika Pietrowska, Sonja Funk, Marta Gawin, Łukasz Marczak, Agata Abramowicz, Piotr Widłak et al.
      Pages 291-307
  6. From Genotype to Phenotype

    1. Front Matter
      Pages 309-309
    2. Sachin Teotia, Dabing Zhang, Guiliang Tang
      Pages 337-349
    3. Volker Baumann, Cornelia Lorenzer, Michael Thell, Anna-Maria Winkler, Johannes Winkler
      Pages 351-360
    4. Mir A. Hossain, Isaac J. Knudson, Shaleen Thakur, Yong Shen, Jared R. Stees, Joeva J. Barrow et al.
      Pages 361-375
  7. Back Matter
    Pages 389-392

About this book

Introduction

Reflecting developments in genome editing, this third edition volume fully updates a collection of key techniques for the study of functional genomics. The book is broken up into sections on bioinformatics, DNA, RNA, and protein analysis, as well as a closing section entitled “From Genotype to Phenotype.” Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Updated and authoritative, Functional Genomics: Methods and Protocols, Third Edition seeks to aid scientists in establishing or extending technologies and techniques in their laboratories.

Keywords

Bioinformatics DNA and RNA analysis Genotype and phenotype Regulatory networks Genome editing CRISPR

Editors and affiliations

  • Michael Kaufmann
    • 1
  • Claudia Klinger
    • 2
  • Andreas Savelsbergh
    • 3
  1. 1.Chair of Biochemistry and Molecular Medicine, Division of Functional Genomics, Faculty of Health, School of Medicine, Center for Biochemical Research and Education ZBAFWitten/Herdecke UniversityWittenGermany
  2. 2.Chair of Biochemistry and Molecular Medicine, Division of Functional Genomics, Faculty of Health, School of Medicine, Center for Biochemical Research and Education ZBAFWitten/Herdecke UniversityWittenGermany
  3. 3.Chair of Biochemistry and Molecular Medicine, Division of Functional Genomics, Faculty of Health, School of Medicine, Center for Biochemical Research and Education ZBAFWitten/Herdecke UniversityWittenGermany

Bibliographic information

  • DOI https://doi.org/10.1007/978-1-4939-7231-9
  • Copyright Information Springer Science+Business Media LLC 2017
  • Publisher Name Humana Press, New York, NY
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-4939-7230-2
  • Online ISBN 978-1-4939-7231-9
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site
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