Microarray Data Analysis

Methods and Applications

  • Michael J. Korenberg

Part of the Methods in Molecular Biology™ book series (MIMB, volume 377)

Table of contents

  1. Front Matter
    Pages i-xiii
  2. Ashani T. Weeraratna, Dennis D. Taub
    Pages 1-16
  3. Robert R. Klevecz, Caroline M. Li, James L. Bolen
    Pages 75-94
  4. Debopriya Das, Michael Q. Zhang
    Pages 95-110
  5. Olga Modlich, Marc Munnes
    Pages 111-130
  6. Yixin Wang, Jan Klijn, Yi Zhang, David Atkins, John Foekens
    Pages 131-138
  7. Mayte Suárez-Fariñas, Marcelo O. Magnasco
    Pages 139-152
  8. Gábor Balázsi, Zoltán N. Oltvai
    Pages 153-161
  9. Manoj Pratim Samanta, Waraporn Tongprasit, Viktor Stolc
    Pages 163-173
  10. Dejan Juric, Claudia Bredel, Branimir I. Sikic, Markus Bredel
    Pages 187-202
  11. Tobey J. MacDonald, Ian F. Pollack, Hideho Okada, Soumyaroop Bhattacharya, James Lyons-Weiler
    Pages 203-221
  12. John D. Osborne, Lihua (Julie) Zhu, Simon M. Lin, Warren A. Kibbe
    Pages 223-241
  13. Michael F. Ochs, Aidan J. Peterson, Andrew Kossenkov, Ghislain Bidaut
    Pages 243-254
  14. Michael J. Korenberg, Pedro Farinha, Randy D. Gascoyne
    Pages 255-268
  15. Back Matter
    Pages 269-273

About this book


In this new volume, renowned authors contribute fascinating, cutting-edge insights into microarray data analysis. Included in this innovative book includes are in-depth looks intopresentations of genomic signal processing, artificial neural network use for microarray data analysis, signal processing and design of microarray time series experiments, application of regression methods, gene expression sprofiles and prognostic markers for primary breast cancer, and factors affecting the cross-correlation of gene expression profiles. Also detailed are use of tiling arrays for large genomes analysis using tiling arrays, acomparative genomic hybridization data on cDNA microarrays, integrated high-resolution genome-wide analysis of gene dosage and gene expression in human brain tumors, gene and MeSH ontology, and predicting survival prediction in follicular lymphoma using tissue microarrays.

The protocols follow the successful Methods in Molecular Biology™ series format, offering step-by-step instructions, an introduction outlining the principles behind the technique, lists of the necessary equipment and reagents, and tips on troubleshooting and avoiding pitfalls.


Annotation Gene Ontology Microarray gene expression genes genome hybridization molecular biology

Editors and affiliations

  • Michael J. Korenberg
    • 1
  1. 1.Department of Electrical and Computer EngineeringQueen’s UniversityKingstonCanada

Bibliographic information

  • DOI
  • Copyright Information Humana Press 2007
  • Publisher Name Humana Press
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-58829-540-8
  • Online ISBN 978-1-59745-390-5
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site
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