Mass Spectrometry Data Analysis in Proteomics

  • Rune Matthiesen

Part of the Methods in Molecular Biology book series (MIMB, volume 2051)

Table of contents

  1. Front Matter
    Pages i-x
  2. Rune Matthiesen, Jakob Bunkenborg
    Pages 1-58
  3. Rune Matthiesen
    Pages 59-77
  4. Alan L. Rockwood, Magnus Palmblad
    Pages 79-114
  5. Alex Henneman, Magnus Palmblad
    Pages 115-132
  6. Rune Matthiesen, Gorka Prieto, Hans Christian Beck
    Pages 133-143
  7. Rune Matthiesen, Ana Sofia Carvalho
    Pages 161-197
  8. Barnali Deb, Irene A. George, Jyoti Sharma, Prashant Kumar
    Pages 241-264
  9. Nagore Elu, Benoit Lectez, Juanma Ramirez, Nerea Osinalde, Ugo Mayor
    Pages 265-276
  10. Sonali V. Mohan, D. S. Nayakanti, Gajanan Sathe, Irene A. George, Harsha Gowda, Prashant Kumar
    Pages 277-295
  11. Nicolai Bjødstrup Palstrøm, Rune Matthiesen, Hans Christian Beck
    Pages 297-308
  12. Ana Pina, Maria Paula Macedo, Roberto Henriques
    Pages 309-343
  13. Jelena Čuklina, Patrick G. A. Pedrioli, Ruedi Aebersold
    Pages 373-387
  14. Yassene Mohammed, Magnus Palmblad
    Pages 389-405
  15. Michael J. Eggertson, Keith Fadgen, John R. Engen, Thomas E. Wales
    Pages 407-435
  16. Back Matter
    Pages 437-445

About this book


The aim of this new edition is to provide detailed information on each topic and present novel ideas and views that can influence future developments in mass spectrometry-based proteomics. In contrast to the previous editions, this third edition aims to provide the most relevant computational methods, focusing on computational concepts. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

 Authoritative and cutting-edge, Mass Spectrometry Data Analysis in Proteomics, Third Edition to ensure successful results in the further study of this vital field.


Mass spectrometry-based proteomics Computational methods Clinical proteomics Proteogenomics Protein-based targets

Editors and affiliations

  • Rune Matthiesen
    • 1
  1. 1.Computational and Experimental Biology Group, CEDOC, Chronic Diseases Research Centre, NOVA Medical School, Faculdade de Ciências MédicasUniversidade NOVA de LisboaLisboaPortugal

Bibliographic information

  • DOI
  • Copyright Information Springer Science+Business Media, LLC, part of Springer Nature 2020
  • Publisher Name Humana, New York, NY
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-4939-9743-5
  • Online ISBN 978-1-4939-9744-2
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site
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