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The Human Virome

Methods and Protocols

  • Andrés Moya
  • Vicente Pérez Brocal

Part of the Methods in Molecular Biology book series (MIMB, volume 1838)

Table of contents

  1. Front Matter
    Pages i-xi
  2. General Experimental Methods

    1. Front Matter
      Pages 1-1
    2. Sonia Monteil-Bouchard, Sarah Temmam, Christelle Desnues
      Pages 25-36
  3. Gastrointestinal Tract

    1. Front Matter
      Pages 47-47
    2. Josué L. Castro-Mejía, Ling Deng, Finn K. Vogensen, Alejandro Reyes, Dennis S. Nielsen
      Pages 49-57
    3. Lenka Kramná, Ondřej Cinek
      Pages 59-83
    4. Nádia Conceição-Neto, Kwe Claude Yinda, Marc Van Ranst, Jelle Matthijnssens
      Pages 85-95
  4. Respiratory Tract

    1. Front Matter
      Pages 109-109
    2. Yu Yang, Shannon D. Walls, Stephen M. Gross, Gary P. Schroth, Richard G. Jarman, Jun Hang
      Pages 125-140
  5. Oral Cavity

    1. Front Matter
      Pages 141-141
  6. Blood–Plasma

    1. Front Matter
      Pages 163-163
    2. Pilar Domingo-Calap, Juan Vicente Bou
      Pages 165-171
  7. Urinary Tract

  8. Bioinformatics

    1. Front Matter
      Pages 201-201
    2. Jorge Francisco Vázquez-Castellanos
      Pages 203-230
    3. Jake Lin, Bryn Y. Kimura, Sami Oikarinen, Matti Nykter
      Pages 261-272
  9. Back Matter
    Pages 273-274

About this book

Introduction

This book details the most comprehensive, up-to –date, and cutting-edge protocols used in wet and dry labs to investigate the viral communities  harbored within and on the human body. Chapters guide readers through methods on collection, isolation, identification and computational/statistical analysis, and body niches to cover those methodological issues inherent to the human tissues and organs. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

 Authoritative and cutting-edge, The Human Virome: Methods and Protocols aims to facilitate researchers with their daily work in the field of the research on the human virome.

Keywords

Flow cytometry metagenomic sequencing microbiota bacteriophages high throughput sequencing

Editors and affiliations

  • Andrés Moya
    • 1
  • Vicente Pérez Brocal
    • 2
  1. 1.Institute for Integrative Systems BiologyUniversity of ValènciaValènciaSpain
  2. 2.Foundation for the Promotion of Health and Biomedical Research of the Valencian Community (FISABIO)ValènciaSpain

Bibliographic information

  • DOI https://doi.org/10.1007/978-1-4939-8682-8
  • Copyright Information Springer Science+Business Media, LLC, part of Springer Nature 2018
  • Publisher Name Humana Press, New York, NY
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-4939-8681-1
  • Online ISBN 978-1-4939-8682-8
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site
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