Applications of homemade kit in mutation detection of genes
- 16 Downloads
Several methods of mutation detection, such as single-strand conformation polymorphism (SSCP), tandem SSCP/heteroduplex analysis and SNaPshot analysis were developed using homemade kit on AB1 310 genetic analyzer, and were successfully applied to mutation detection of 31 colorectal tumor samples. The sieving capability of homemade kit and commercial kit were compared, results demonstrate that homemade kit has higher resolution and shorter analysis time. In clinical tumor samples, 26% K-ras (exon 1) and 24% p53 (exons 7–8) were found to have mutations, and all mutations were single point variations. A majority of mutations occurred in one gene, only 1 tumor contained alterations in the two genes, which indicates that development of colorectal cancer lies on alternate pathways, and may correlate with different gene mutations
Keywordssingle nucleotide polymorphism (SNP) single-strand conformation polymorphism (SSCP) heteroduplex analysis (HA) SNaPshot linear polyacrylamide (LPA) polydimethylacrylamide (PDMA)
Unable to display preview. Download preview PDF.
- 18.Bjorheim, J., Abrahamsen, T. W., Kristensen, A. T. et al., Approach to analysis of single nucleotide polymorphisms by automated constant denaturant capillary electrophoresis, Mutation Research, 2003, 526: 75–83.Google Scholar