A human stool-derived Bilophila wadsworthia strain caused systemic inflammation in specific-pathogen-free mice
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Bilophila wadsworthia is a major member of sulfidogenic bacteria in human gut, it was originally recovered from different clinical specimens of intra-abdominal infections and recently was reported potentially linked to different chronic metabolic disorders. However, there is still insufficient understanding on its detailed function and mechanism to date.
A B. wadsworthia strain was isolated from fresh feces of a latent autoimmune diabetes in adults patient and we investigated its pathogenicity by oral administration to specific-pathogen-free mice. Tissue samples and serum were collected after sacrifice. Stool samples were collected at different time points to profile the gut microbiota.
Bilophila wadsworthia infection resulted in the reduction of body weight and fat mass, apparent hepatosplenomegaly and elevated serum inflammatory factors, including serum amyloid A and interleukin-6, while without significant change of the overall gut microbiota structure.
These results demonstrated that higher amount of B. wadsworthia caused systemic inflammatory response in SPF mice, which adds new evidence to the pathogenicity of this bacterium and implied its potential role to the chronic inflammation related metabolic diseases like diabetes.
KeywordsBilophila wadsworthia Inflammation Hepatosplenomegaly Gut microbiota Mice
anaerobe basal broth
- B. wadsworthia
latant autoimmune diabetes in adults
Lipopolysaccharide Binding Protein
Operational Taxonomic Unit
Serum Amyloid A
tumor necrosis factor-alpha
Gut microbiota has been closely linked with many chronic and refractory diseases such as inflammatory bowel disease, colorectal cancer, obesity, diabetes, and even mental diseases like autism. The key roles of an increasing number of gut bacteria have been revealed, which herald a great progress in our knowledge of the etiology of those diseases and offer great promise for optimizing health and treating diseases in novel ways. For instance, an Enterobacter cloacae strain has been identified as an obesity-inducing opportunistic pathogen, whose mono-association in germfree mice can recapitulate the obese phenotype, including low-grade inflammation, adiposity and insulin resistance . Another bacterium, Akkermansia muciniphila has been demonstrated to negatively correlated with symptoms of obesity and type 2 diabetes, and has the potential as a probiotic to reverse high-fat diet-induced metabolic disorders in mice . Recent advances in microbial cultivation and model animal are greatly facilitating our understanding of the fundamental and ultimate question—”who” does “what” and “how” referring to the active roles and mechanisms of human gut microbiota .
Bilophila wadsworthia is a sulfite-reducing and hydrogen sulfide-producing microbe, which was originally isolated from specimens of peritoneal fluid and tissue of patients with appendicitis , while usually difficult to detect in healthy individuals. B. wadsworthia is an obligately anaerobic Gram-negative bacillus and can be stimulated by bile. Since it was named in 1989, there has been limited progress on this bacterium. Till in 2012, researchers began to realize the function of this commensal gut bacterium. Devkota reported that a milk-derived saturated fat diet induced a bloom of B. wadsworthia in gut of SPF mice. And mono-inoculation of this pathobiont in germfree IL10−/− mice fed with milk fat diet can even induce TH1 immune response and colitis development . This bacterium was also detected over-represented in colonic microbiota of colorectal cancer patients, which implied its possible role in colorectal carcinogenesis . Though mounting studies have highlighted the correlations of B. wadsworthia in different human diseases [7, 8, 9], especially chronic metabolic diseases, the mechanisms of its pathogenicity are not yet well characterized.
In the study described here, we obtained an isolate of B. wadsworthia from a new-onset LADA (latent autoimmune diabetes in adults) patient. The objective of this study was to examine the outcome of the infection of this strain in normal SPF mice, and try to elicit its possible pathogenicity.
Isolation and identification of B. wadsworthia
The B. wadsworthia strain used in this study was isolated from fresh fecal samples of a newly diagnosed LADA 30-year-old female patient. The study was approved by Ethics Committee at Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong University. Informed consent was signed by the patient. By coincidence, we had already collected and stored two fecal samples of this individual 4 years ago when there wasn’t any LADA related symptom developed in this girl. The DNA abundance of B. wadsworthia before and after LADA onset was detected by Real-time PCR using SYBR Green Supermix (Bio-Rad, 170-8882AP). DNA extraction from fecal samples was conducted as previously described . A B. wadsworthia-specific PCR primer set targeted taurine:pyruvate aminotransferase (Tpa) gene was used to quantify B. wadsworthia in stool , and primer set Uni331-F/Uni797-R targeted universal bacterial 16S rRNA gene was used to quantify total bacteria .
For B. wadsworthia isolation, a fresh fecal sample was collected and transported into the anaerobic workstation (DG500, DWS, UK) within 5 min after defecation. Bacteria were isolated using Postgate E medium  supplemented with 0.1% (w/v) bile salt, and then transferred to ABB medium (Anaerobe basal broth)  supplemented with 10 mM taurine for rapid growth. Identification of B. wadsworthia was confirmed by 16S rRNA gene sequencing.
To easily detect this B. wadsworthia strain in fecal samples of subsequent mice experiment, a spontaneous mutant strain for rifampicin resistance was selected on rifampicin-containing media  and was used as the inoculum to mice.
Twenty 6-week-old male SPF C57BL/6 mice were purchased from SLAC Inc. (Shanghai, China). Mice were maintained under a regular 12-h light cycle and fed with normal chow diet ad libitum. After 2 weeks acclimation, animals were randomly assigned to either BW group (daily gavaged with 1 × 108 CFU B. wadsworthia suspended in 100 μL anaerobic PBS solution for 1 week) or NC group (daily gavaged with an equivalent volume of anaerobic PBS solution for 1 week). Body weight and food intake were recorded every day. Fresh fecal samples were collected on Day 0, 1, 5 and 7. Living cells of B. wadsworthia were detected by plate counting on ABB agar supplemented with 10 mM taurine and 100 μg/mL rifampicin. After sacrifice on Day 7, blood, liver, spleen, fat and colon were collected. Distal colons were fixed in 4% paraformaldehyde, embedded in paraffin, and stained with hematoxylin/eosin. The ethical treatment of animals was assured by the Animal Care and Use Committee of the School of Life Sciences and Biotechnology, Shanghai Jiao Tong University.
Enzyme-linked immunosorbent assay (ELISA)
Serum concentrations for the following inflammation markers were determined using ELISA following the manufacturer’s instructions: Serum Amyloid A (SAA, Tridelta, TP802-M), Lipopolysaccharide Binding Protein (LBP, Cell Sciences, CKM043), Interleukin-6 (IL-6, eBioscience, BMS603HS) and tumor necrosis factor-alpha (TNF-α, eBioscience, BMS607HS).
Detection of gene expression in the colon
Primers used in quantitative PCR assays
Gut microbiota profiling
DNA extraction from fecal samples was conducted as previously described . A sequencing library of V3–V4 region of the bacterial 16S rRNA gene was prepared following the manufacturer’s instruction with some modifications . The locus-specific primers for V3–V4 region of the bacterial 16S rRNA gene are as follows: Forward Primer: 5′-CCTACGGGNGGCWGCAG-3′; Reverse Primer: 5′-GACTACHVGGGTATCTAATCC-3′. For the Amplicon PCR step (amplification of 16S rRNA gene V3–V4 region), the 25 μL reaction mix consisted of 1 × Phanta Max Buffer, 0.2 mM dNTP, 0.25 μM Forward Primer, 0.25 μM Reverse Primer, 0.5 U of Phanta Max Super-Fidelity DNA Polymerase and 10 ng template DNA. The program consisted of 1 cycle of 95 °C for 3 min, followed by 21 cycles of 95 °C for 30 s, 55 °C for 30 s and 72 °C for 30 s, and finally 1 cycle of 72 °C for 5 min. For the Index PCR step (attachment of Illumina sequencing adapters and dual-index barcodes), the 25 μL reaction mix consisted of 1 × Phanta Max Buffer, 0.2 mM dNTP, 2.5 μL Nextera XT Index Primer 1 (N7XX), 2.5 μL Nextera XT Index Primer 2 (S5XX), 0.5 U of Phanta Max Super-Fidelity DNA Polymerase and 2.5 μL purified product of the Amplicon PCR step as template DNA. The program consisted of 1 cycle of 95 °C for 3 min, followed by 8 cycles of 95 °C for 30 s, 55 °C for 30 s and 72 °C for 30 s, and finally 1 cycle of 72 °C for 5 min. The purified products were mixed at equal ratio for sequencing on Illumina Miseq platform (Illumina Inc., USA).
After sequencing, high quality sequences were selected for further analysis. Operational Taxonomic Units (OTUs) were picked by Usearch (v8.0.1623_i86linux32) at 97% cutoff . Alpha-diversity (including observed OTUs and Shannon index) and beta-diversity (based on bray–curtis distance, unweighted-unifrac distance and weighted-unifrac distance) were performed on QIIME platform .
Statistical analysis was performed with Statistical Package for Social Sciences software version 23.0 (SPSS Inc., USA). To detect the variation between NC group and BW group, independent samples t test or Mann–Whitney U test was used, depending on whether the data were normally distributed or not.
Isolation and identification of B. wadsworthia
The B. wadsworthia strain was isolated from fresh feces of a female volunteer who was newly diagnosed with LADA. We compared the abundance of B. wadsworthia in fecal samples of this individual before and after the onset of LADA. In the acute disease stage, the abundance of B. wadsworthia was considerably higher than the sample collected 4 years before the diagnosis (1.11 × 103 vs. 1.35 × 102 copies/ng fecal DNA). After modification of tpa gene copy number with 16S rRNA gene copy number, the relative abundance of B. wadsworthia changed from 0.003 to 0.017% with the onset of LADA.
B. wadsworthia infection reduced the body weight and fat mass
To characterize the effect of B. wadsworthia infection, we orally inoculated SPF mice for 7 days continuously, with 1 × 108 CFU per day. The target strain was detected in stool samples of each mouse at the end of the trial with the abundance ranging from 2.36 × 103 to 2.45 × 106 CFU/g of feces.
Following oral inoculation with B. wadsworthia, the body weight of mice in BW group decreased compared with NC group. On Day 5, the body weight of BW mice reduced to the lowest level with 13.1% loss on average, and at the last day of the experiment (Day 7) with 11.9% loss on average (Fig. 1c). Monitoring of food intake showed that BW mice also decreased their food intake markedly before Day 5, while in the last 2 days, food intake of this group recovered to the similar level with that of NC group (Fig. 1d).
We also measured the major fat mass of both groups. In BW mice, a significant reduction of the mass of epididymal, mesenteric and perirenal fat was observed, with 35.1, 42.0 and 39.4% loss on average respectively, compared with NC group. Subcutaneous fat mass displayed a decreased tendency but not statistically significant (Fig. 1e–h).
B. wadsworthia infection induced hepatosplenomegaly
B. wadsworthia infection didn’t induce aberrant changes of colon
B. wadsworthia induced overrepresented systemic inflammation
B. wadsworthia inoculation did not significantly change the gut microbiota of mice
To profile the overall structure of gut microbiota after B. wadsworthia gavage, the V3–V4 region of the bacterial 16S rRNA gene was sequenced for fecal samples of mice in both groups on Day 0, 1, 5 and 7, using Illumina Miseq platform. A total of 613,626 quality-filtered reads were obtained. The average reads number per sample was 15,341 ± 1628 (mean ± S.D.), with the highest reads number 18,813 and lowest 10,822, which implied a uniform sequence distribution. Reads were classified into 539 OTUs at 97% similarity level with Usearch.
Comparison of α-diversity of the bacterial communities on Day 0, 1, 5 and 7 exhibited no great difference of the community diversity between BW and NC group (Fig. 5c, d). During the whole treatment, the gut microbiota of the two groups contained the similar rarefaction and Shannon diversity index, only with the exception that, on Day 5, the Shannon index of BW mice was higher than NC mice (P < 0.05), while this tendency disappeared on Day 7.
To further compare the microbiota composition of B. wadsworthia infected mice with that of NC mice, principal coordinate analysis (PCoA) based on Bray–Curtis distance, Unweighted and Weighted UniFrac matrices were all performed. Unfortunately, neither of the three plot patterns exhibited divergence of the two groups on different time points (Fig. 5e). PERMANOVA test based on the three distances revealed that on either four time points, the P values were all higher than 0.05 (Fig. 5f), which confirmed that the microbiota composition of mice inoculated with B. wadsworthia didn’t significantly shift compared with NC group. We also conducted taxon-based analysis at different taxonomic levels (from phylum to genus) by Mann–Whitney U test, while all the P values were greater than 0.05 after adjusted with FDR, which implied no significant difference was observed between the two groups (data not shown). Among the 539 OTUs identified in this study, one OTU was assigned as B. wadsworthia, which only presented in three samples in BW group. In those three samples, only 2, 12 and 3 sequences were found, respectively. Given the 613,626 quality-filtered sequences totally, the relative abundance of B. wadsworthia was too low, even undetectable in most samples. Thus, though ABB agar plating showed B. wadsworthia was enriched in BW group of mice due to inoculation, their abundance in the whole microbiota was still lower than the detection limit of the sequencing system.
Bilophila wadsworthia belongs to the Desulfovibrionaceae family and is the second most recovered isolate of sulfidogenic bacteria in human gut. Sulfidogenic bacteria metabolize sulfated compounds and produce hydrogen sulfide that triggers direct inflammation, exerts genotoxic and cytotoxic effects on epithelial cells, and impairs gut barrier . Correlation of sulfidogenic bacteria to the etiology of chronic metabolic diseases such as obesity , type 2 diabetes  and colorectal cancer  has been explored only recently.
Though B. wadsworthia have been identified from a variety of intra-abdominal infections, including sepsis, liver abscesses, cholecystitis et al. [25, 26], the direct evidence linking B. wadsworthia with chronic diseases is still insufficient. In the present study described here, we investigated the outcome of B. wadsworthia infection on SPF C57BL/6 mice. We hypothesize that increased numbers of B. wadsworthia in gut microbiota induces systemic inflammation and thus contributes to the onset of the chronic diseases.
After inoculation, we found that the B. wadsworthia strain couldn’t be detected from fresh fecal samples of mice with only one time oral gavage. This refers to a typical microbial ecology phenomenon termed colonization resistance (CR), which is a mechanism that the robust commensal microbiota of the host protects itself against incursion by exogenous and often pathogenic microorganisms . Only in animals whose CR was impaired by antibiotic treatments or in germ-free animals without any microbiota, the hosts showed susceptible to invading pathogens even at a very low dosage . To solve this problem, we repeated exposure of B. wadsworthia to mice for 1 week to ensure enough number of live B. wadsworthia cells in the gut. We observed that this strain could survive through the digestive tract as live B. wadsworthia could be recovered from fresh feces of mice. Such a strategy has been used in many studies to increase the adaptability of the inoculated bacterium to experimental SPF mice [2, 19].
It has been proved that milk-derived or lard-based high saturated fat diet [5, 29] and even an animal-based diet  can markedly promote the flourish of B. wadsworthia in gut. Saturated fat diet leads to increased hepatic taurine conjugation of bile acids, thus provides more sulfur-rich taurocholic acid in gut, which accelerates the growth of the sulfite-reducing bacterium B. wadsworthia. In this study, all the mice were fed with normal chow diet, that didn’t favor the growth of B. wadsworthia in gut. This may also contribute to the difficulty to adapt this strain to gut of mice.
In the present study, we observed that B. wadsworthia could induce pathological responses to the SPF mice. Seven days of inoculation resulted in a significant decrease of body weight and three main fat mass of BW mice, compared with NC mice. While, the weight of spleen and liver of BW mice showed a reverse trend that animals in this group developed demonstrable hepatosplenomegaly, which is a common clinico-pathological sign related with various infections [31, 32, 33].
We also examined the response of colon after B. wadsworthia inoculation. All animals had normal colonic morphology and no obvious histologic changes were observed. McOrist et al. also reported that B. wadsworthia infected pigs displayed no or minor specific lesions in the small and large intestine . The relative gene expression of pro-inflammatory cytokines IL-6, TNF-α and TLR4 in colon of BW mice displayed similar levels with those of NC mice, suggesting no local immunopathological response induced in colon by B. wadsworthia. A previous work has presented that consumption of milk-derived fat not only promoted the expansion of B. wadsworthia in SPF mice, but also increased incidence of colitis in colon of genetically susceptible Il10 −/− mice, while not in wild-type mice . Our result also demonstrated that the B. wadsworthia infection in normal SPF mice cannot directly trigger immune response in colon in the present short-term experiment.
Notably, we observed that B. wadsworthia infection provoked a systemic inflammatory response in SPF mice. The key circulating inflammatory cytokines like SAA and IL-6 significantly increased after B. wadsworthia inoculation. SAA proteins are acute phase proteins mainly secreted by the liver in response to pro-inflammatory stimuli , and their increased levels in serum have been associated with several chronic inflammation-based diseases, such as obesity [36, 37], hyperglycemia , insulin resistance  and cardiovascular disease [40, 41]. SAA has also been reported to be involved in LPS signaling pathway that links inflammation to metabolic disorders in mice, for instance, de Oliveira et al. found that high fat diet induced metabolic endotoxaemia, and, body weight gain and insulin resistance could be prevented by an SAA-targeted antisense oligonucleotide treatment . IL-6 also represents a keystone cytokine in infection and inflammation , which elicits cellular immune responses to affected cells and mucosal humoral responses directed against reinfection. Increasing serum levels of IL-6 provides the basis for the amplification step of chronic inflammatory proliferation . We also detected the levels of serum LBP and TNF-α, their levels in BW group tended to be higher than NC group, while the differences were not statistically significant. Similar phenomenon has also been reported in both humans and rats, that the levels of IL-6 and TNF-α were in parallel with the abundance change of Bilophila wadsworthia [8, 45].
As a Gram-negative bacterium, B. wadsworthia can release lipopolysaccharide as endotoxin, though its endotoxic activity is relatively low compared with E. coli . This strain can also induce procoagulant, and an in vitro study implied its ability to attach to human epithelial cells of the colon, that is usually considered as the first step in establishing infection in the host [46, 47]. Besides, B. wadsworthia participates in taurine respiration in human gut which leads to sulfite formation . The metabolic end-product of dissimilatory sulphate and sulfite reduction, hydrogen sulfide, is well documented to be pro-inflammatory and toxic to mucosal tissue at higher physiological doses . These features of B. wadsworthia may all contribute to its inflammatory responses and pathogenicity.
Recent years, accumulating evidence points toward the interplay between the microbiota and the immune system as central to the development of chronic metabolic diseases [50, 51, 52]. The feature that the outgrowth of B. wadsworthia in gut microbiota can promote low-grade systemic inflammation may account a part for the high prevalence of this bacterium in stool of mice with chronic disease such as colon cancer, colitis and low-fat/high-sugar diet induced obese reported previously [5, 6, 8]. Though the B. wadsworthia strain used in this study was isolated only from one LADA patient, and its prevalence in other patients is unclear, the data showed here provided important clue for the physiology of this species of commensal bacteria. More patients will be recruited in future study to further confirm the results.
To investigate whether the etiology of B. wadsworthia is related to its perturbation of the host gut microbiota, we compared the composition of gut microbiota in mice with and without B. wadsworthia infection. It was demonstrated that B. wadsworthia made no significant change to the whole existing gut microbiota, in terms of not only the α-diversity but also the OTUs composition. This result indicates that, after 7 days of B. wadsworthia infection, the inflammatory phenotypes developed in mice might be caused by B. wadsworthia itself and/or its metabolic products, without marked modification of the host’s overall microbiota. Similar results have been reported in several other studies. For example, A. muciniphila is a mucin-degrading bacterium that resides in the human gut , its abundance decreases in obese and type 2 diabetic mice. Four weeks of A. muciniphila administration could reverse high-fat diet-induced metabolic disorders in C57BL/6 mice, without modifying gut microbiota composition . A butyrate-producing bacterium, Anaerostipes hadrus BPB5, could increase the butyrate content in healthy SPF C57BL/6 mice after 7 days treatment, while the whole gut microbiota didn’t change significantly .
Our results add new evidence to the virulence of B. wadsworthia. The decreased body weight and fat mass, apparent hepatosplenomegaly and elevated serum levels of SAA and IL-6 demonstrated that this bacterium triggers the systemic low-grade inflammation of the host. Unfortunately, there is no diabetes mellitus specific parameters addressed in this report. Our next plan is to examine the clinical outcomes of B. wadsworthia including glucose and insulin metabolism, to comprehensively understand the metabolic activities and functions of it.
This report provides a snapshot for responses of B. wadsworthia infection in normal mice, which shows the link of this bacterium to the systemic inflammation of the host. Considering that the low-grade inflammation is a common pathogenetic denominator in different metabolic diseases such as obesity, diabetes and aging, to name just a few, our study also implies the potential roles of B. wadsworthia to the chronic inflammation related metabolic disorders.
XP, WL and LZ designed the experiments. BH, DD and XM conducted the bacteria isolation and identification. ZF conducted the animal trial. ZF, WL and XP analyzed the experiments. ZF and XP wrote the manuscript. All authors read and approved the final manuscript.
The authors declare that they have no competing interests.
Availability of data and materials
The datasets used and/or analysed during the current study are available from the corresponding author on reasonable request. The 16S rRNA gene V3–V4 region sequences that support the findings of this study have been deposited in GenBank Sequence Read Archive database under Accession Number SRP095440.
Consent for publication
This manuscript did not include any details, images, or videos relating to individual participants.
Ethics approval and consent to participate
The study was approved by Ethics Committee at Shanghai General Hospital. Informed consent was signed by the stool donor. The ethical treatment of animals was assured by the Animal Care and Use Committee of the School of Life Sciences and Biotechnology, Shanghai Jiao Tong University.
This work was supported by the Grants from the National Natural Science Foundation of China (81670603 and 31330005), Shanghai Jiao Tong University Project (YG2014ZD10).
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