Requirements for activation and RAFT localization of the T-lymphocyte kinase Rlk/Txk
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The Tec family kinases are implicated in signaling from lymphocyte antigen receptors and are activated following phosphorylation by Src kinases. For most Tec kinases, this activation requires an interaction between their pleckstrin homology (PH) domains and the products of phosphoinositide 3-Kinase, which localizes Tec kinases to membrane RAFTs. Rlk/Txk is a Tec related kinase expressed in T cells that lacks a pleckstrin homology domain, having instead a palmitoylated cysteine-string motif. To evaluate Rlk's function in T cell receptor signaling cascades, we examined the requirements for Rlk localization and activation by Src family kinases.
We demonstrate that Rlk is also associated with RAFTs, despite its lack of a pleckstrin homology domain. Rlk RAFT association requires the cysteine-string motif and is independent of PI3 Kinase activity. We further demonstrate that Rlk can be phosphorylated and activated by Src kinases, leading to a decrease in its half-life. A specific tyrosine in the activation loop of Rlk, Y420, is required for phosphorylation and activation, as well as for decreased stability, but is not required for lipid RAFT association. Mutation of this tyrosine also prevents increased tyrosine phosphorylation of Rlk after stimulation of the T cell receptor, suggesting that Rlk is phosphorylated by Src family kinases in response to T cell receptor engagement.
Like the other related Tec kinases, Rlk is associated with lipid RAFTs and can be phosphorylated and activated by Src family kinases, supporting a role for Rlk in signaling downstream of Src kinases in T cell activation.
KeywordsTyrosine Phosphorylation Pleckstrin Homology Domain Raft Fraction Raft Association Jurkat Lymphoma Cell Line
Src homology-2, SH3, Src homology-3
T cell receptor
surface immunoglobulin M
Sodium Dodecyl Sulfate
phosphate buffered saline
polyacrylamide gel electrophoresis.
Engagement of antigen receptors on lymphocytes leads to the rapid sequential activation of non-receptor tyrosine kinases, including well-studied members of the Src and the ZAP-70/Syk families [1,2]. Recently, the Tec kinases have also been implicated as important components of signaling from antigen and other lymphocyte cell surface receptors (reviewed in [3,4,5].) This subfamily includes six members: Btk, Tec, Itk/Tsk/Emt, Bmx/Emt, Dsrc29, and Rlk/Txk [3,6,7]. The importance of the Tec kinases in antigen receptor signaling was first demonstrated by the observation that mutations in BTK result in the human disease X-linked agammaglobulinemia (XLA) and the murine counterpart X-linked immunodeficiency (xid). These severe B cell immunodeficiencies are characterized by diminished numbers of mature B cells and reduced immunoglobulin levels associated with impaired PLC-γ activation and Ca++ mobilization in response to surface IgM stimulation (sIgM) [8,9,10,11]. Btk kinase activity and tyrosine phosphorylation increase upon stimulation of sIgM as well as the IL-5 and IL6 receptors in B cells, and upon crosslinking of the high affinity IgE receptor (FcεRII) in mast cells [12,13,14,15]. It is now clear that the other Tec kinases participate in similar signaling cascades in multiple cell-types. Itk, a Tec family kinase that is predominantly expressed in T cells, is tyrosine phosphorylated and activated after stimulation of either the T cell receptor (TCR) or CD28 in T cell lines, and FcεRII in mast cells [12,16,17,18]. Recently, we have found that Rlk/Txk can also be phosphorylated after TCR engagement . Furthermore, we have found that combined mutation of Rlk and Itk leads to profound defects in TCR signaling associated with impaired activation of PLC-γ . Such data suggest that members of this family may function similarly in signaling pathways downstream from these cell surface antigen receptors.
Several lines of evidence indicate that, in these signaling cascades, Tec family members act downstream of Src kinases. Src kinases are activated within seconds of sIgM stimulation in B cells, while Btk is activated within minutes . Moreover, Src family kinases have been found to phosphorylate and activate Btk, Itk, Tec and Rlk when co-expressed [16,19,21,22,23]. Phosphopeptide mapping and mutational analyses of Btk have identified Y551 in the activation loop of the kinase domain as the major Src-transphosphorylation site. Phosphorylation of Y551 and a putative autophosphorylation site Y223 in the SH3 domain of Btk [23,24] are observed following BCR activation, suggesting that these tyrosine phosphorylations are functionally important for antigen receptor signaling. Although physical binding of full length Btk to Src family kinases in vivo has not been reported, in vitro interactions have been demonstrated between proline-rich motifs in the amino-terminal sequence of Btk and the Src homology (SH) 3 domains of Src family kinases [25,26].
Recently, it has been found that the activation of Btk and Itk by Src family kinases is potentiated by and requires the activity of Phosphoinositide 3-kinase (PI3K), the products of which interact with the PH domains of Tec kinases [27,28]. This interaction helps localize Tec family kinases to the membrane where phosphorylation by Src kinases can occur. Data suggest that, for Itk, this membrane association specifically targets the protein to glycolipid enriched detergent-insoluble membrane microdomains known as "RAFTs" and that both this association and the activation of Itk requires the PH domain .
rlk/TXK encodes a kinase expressed in T cells and mast cells that closely resembles members of the Btk/Tec family of kinases [30,31,32]. However, in contrast to the other Tec family members, Rlk lacks a pleckstrin homology domain. Instead, we have found that the rlk gene encodes a distinctive palmitoylated cysteine-string motif near its amino-terminus. Furthermore, we have found that an internal translational start-site, downstream of the region encoding the cysteine-string motif, gives rise to a second isoform that lacks the palmitoylated cysteine string and that can be localized in the nucleus . Although these distinctive features suggest that Rlk may have atypical functions, Rlk shares with Btk kinases the homologous proline-rich motif that binds the SH3 domains of Src kinases and the tyrosines at equivalent sites in the SH3 and kinase domains.
We have recently shown that Rlk can be phosphorylated and activated by the Src family kinase Fyn. However, consistent with the lack of a pleckstrin homology domain, activation of Rlk is independent of PI3K activity . To further characterize the mechanism of activation of Rlk/Txk, we studied the nature of Rlk's localization and interaction with Src family kinases. We report here a physical association of Rlk with Fyn both in vitro and when co-expressed in 293T cells. Similar to Btk and Itk, we find that a conserved tyrosine in the activation loop of the Rlk kinase domain, Y420, mediates specificity for transphosphorylation of Rlk by Src family kinases. This tyrosine is also critical for in vivo activation of Rlk, since mutation of Y420 to phenylalanine (Y420F) reduces phosphorylation of Rlk upon co-expression with Fyn or after engagement of the TCR. Furthermore, we have observed that the phosphorylation of Rlk by Fyn increases Rlk turnover, consistent with the increased turnover observed with other TCR signaling molecules following activation. In contrast, localization of Rlk does not appear to rely on tyrosine phosphorylation or kinase activity of Rlk. Instead, we find a constitutive association of a fraction of the full-length Rlk with a detergent-insoluble RAFT fraction. Association with the RAFT compartment does not depend on tyrosine phosphorylation, nor on PI3K activation, but rather on the presence of the cysteine string motif. Thus, despite lacking a pleckstrin homology domain, Rlk is localized in RAFTs, is phosphorylated by Src family kinases, and may transduce signals downstream of Src family kinases during T cell activation.
Rlk Interacts with Fyn
Rlk/Txk is a Tec related kinase that is predominantly expressed in cells of the T cell lineage [30,31,32]. We have recently demonstrated that Rlk is phosphorylated following stimulation of the Jurkat T cell line by crosslinking of the CD3ε chain of the TCR . We have further observed that Rlk can be phosphorylated and activated by co-expression with the Src family kinase, Fyn, in a PI3K-independent fashion. In contrast, activation of Btk and Itk by Src family kinases is PI3K-dependent. To further characterize the mechanism of Rlk activation by Src family kinases, we examined potential interactions of Rlk with Src kinases both in vitro and in vivo.
Because Fyn is expressed in T cells and Hck and Lyn are not, we pursued the connection between Rlk and the T cell-specific isoform p59FynT. Co-immunoprecipitation demonstrated an interaction between these proteins in extracts of cells in which both Rlk and Fyn were expressed (Fig. 1C). Anti-Rlk serum precipitated Fyn from lysates only when Rlk was expressed (Fig. 1C, lane 4). Likewise, anti-Fyn serum could precipitate Rlk only when both Rlk and Fyn were produced (data not shown). This interaction was not dependent on the activity of either kinase, as co-immunoprecipitation was observed with either wild-type (WT) or kinase-inactive versions of the two proteins. Furthermore, both isoforms of Rlk were also able to co-precipitate with Fyn (data not shown). Finally, we have not observed co-precipitation of full-length Rlk with several other proteins involved in TCR signaling (unpublished observations).
Rlk co-localizes with a portion of Fyn
To further examine potential interactions between Rlk and Fyn we compared the subcellular distribution of Rlk to that of p59FynT. For these and subsequent analyses, we utilized Green Fluorescent Protein (GFP)-tagged versions of Rlk. We have previously demonstrated that these fusion proteins are kinase-active and exhibit localization patterns similar to those observed by indirect immunofluorescence for wild type Rlk . Furthermore, we have found that, like WT Rlk, they co-precipitate with Fyn (data not shown). However, unlike WT Rlk, Rlk-GFP does not co-migrate with immunoglobulin heavy chain. Since these GFP fusions behaved similarly to wildtype Rlk in all known respects except for electrophoretic mobility, we used GFP fusions of mutant and wild type versions of Rlk to facilitate studies of Rlk localization and activation.
Fyn phosphorylates and activates Rlk: A Conserved Tyrosine (Y420) Provides Specificity For Phosphorylation of Rlk By Src Kinases
Like other Btk family members, Rlk contains a highly conserved tyrosine (Y420) within a consensus sequence for phosphorylation recognized by Src family tyrosine kinases . This site corresponds to the location of the autophosphorylation site in the activation loop of Src-related kinases . To determine whether this tyrosine is required for Rlk activation by Src family kinases, we mutated it to phenylalanine (Y420F). In contrast to WT Rlk-GFP, tyrosine phosphorylation and kinase activity of the RlkY420F mutant was not significantly increased by co-expression with Fyn (Fig. 3A, B and data not shown). These results suggest that Y420 is a major site of phosphorylation by Fyn and that phosphorylation at this site leads to activation of the Rlk kinase. Furthermore, since baseline tyrosine phosphorylation and kinase activity of the Y420F mutant is also lower than WT (Fig. 3B and data not shown), it is possible that phosphorylation by endogenous Src family kinases may contribute to the activity of Rlk in 293T cells, although we cannot exclude the possibility that this mutant lowers kinase activity for other reasons.
The major autophosphorylation site in Btk maps to Y223 within the SH3 domain ; an analogous tyrosine is conserved in Rlk (Y91). Mutation of this tyrosine (Y91F) reduced tyrosine phosphorylation of Rlk approximately two-fold when the Y91F mutant was expressed alone or with Fyn (Fig. 3A). However, Fyn still significantly enhanced the phosphorylation of Rlk (Y91F), consistent with use of an intact transphosphorylation site (Y420) (Fig. 3A). The in vitro kinase activity of Rlk-Y91F was also lower (about half that of wild type); however, the kinase activity was still augmented by the presence of Fyn (Fig. 3C). These results suggest that tyrosine 91 may be required for optimal phosphorylation and kinase activity of Rlk, but is distinct from the major site phosphorylated by Src family kinases.
Finally, since the larger isoform of Rlk consistently exhibits higher levels of tyrosine phosphorylation (see Fig. 3A), we mutated the single tyrosine (Y6) not found on the shorter isoform. Mutation of Y6 did not greatly reduce the tyrosine phosphorylation of Rlk, either in the presence or absence of co-expressed Fyn (Fig. 3D). Significantly, the larger isoform still exhibited a higher level of tyrosine phosphorylation than the shorter form of Rlk. Thus, the increased tyrosine phosphorylation of the larger isoform cannot be attributed solely to a phosphorylation site present on the larger protein species.
Rlk localizes in RAFTs
Upon TCR signaling, many molecules have been found to show markedly increased association with RAFTs. Since we have found that Rlk can be phosphorylated by Src family kinases leading to activation of its kinase, we evaluated whether phosphorylation could influence RAFT association. Neither mutation of a conserved lysine in the kinase domain, which rendered Rlk kinase inactive, nor mutation of the Src family kinase phosphorylation site, tyrosine 420, prevented association with the RAFT fraction. Thus, phosphorylation and activation of Rlk does not appear to contribute to its association with RAFTs (Fig. 4B).
A key mechanism of targeting proteins to RAFTs is lipid modification. Since the long form of Rlk is palmitoylated on its cysteine string motif and palmitoylated proteins can be associated with RAFTs, we examined the localization of a mutant version of RlkCM in which the cysteine string is mutated, thereby preventing palmitoylation of the long form of Rlk. The cysteine-string mutant demonstrated marked reduction in RAFT association (Fig. 4B). Indeed, while a small amount of the Rlk cysteine-string mutant was still found associated with the RAFT fraction, the amount of the long isoform of RlkCM in the RAFT fraction was equivalent to that of the short isoform. This observation suggests that the cysteine-string may be a major mechanism of targeting full-length Rlk to lipid RAFTs. However, the localization of a small portion of both the short and long isoforms of the cysteine string mutant to RAFTs suggests that other targeting mechanisms may also contribute to the localization of this kinase in RAFTs.
Recent data suggests that both Itk and Btk can also be associated with lipid RAFTs [29,35]. For Itk, this association requires the PH domain and products of PI3K. For example, in the Jurkat lymphoma cell line, which is deficient in the inositol phosphatase PTEN, Itk is constitutively associated with the membrane . Since our RAFT analyses of RLK were performed in Jurkat cells, we also examined the effects of PI3K inhibition on Rlk localization. Treatment of Jurkat cells with Wortmannin had no effect on Rlk association with RAFTs (Fig. 4C). Thus, RAFT localization of Rlk, like its activation by Src family kinases, appears to be independent of the activity of PI3K.
Fyn alters the half life of Rlk in the detergent soluble fraction of transfected cells
Since this analysis included only Rlk protein in the soluble fractions of detergent lysates, these results may represent changes in protein stability, or subcellular localization and detergent solubility, factors that all can contribute to changes in intracellular signaling. In particular, since Rlk can be associated with detergent-insoluble RAFTs, it is possible that a change in subcellular localization or associations may contribute to the decrease in Rlk protein. To address these possibilities, we performed similar analyses after lysing cells under harsh detergent conditions (using 1% SDS), then diluting the samples before performing immunoprecipitations. Consistent with our observation that the phosphorylation status of Rlk does not significantly contribute to its association with RAFTs, we still observed a decreased half-life of Rlk co-expressed with Fyn when lysed under these harsh conditions (data not shown), arguing that phosphorylation by Fyn specifically accelerates Rlk turnover.
Rlk phosphorylation in response to TCR engagement requires Tyrosine 420
By several criteria, Rlk appears to be a member of the Tec family of tyrosine kinases, yet significant differences exist between Rlk and the other kinases in this family. To elucidate functional similarities and differences between Rlk and other Tec kinases in signaling from antigen receptors, we investigated the interactions of Rlk with Src family kinases. Our data suggest that such interactions occur and that the phosphorylation events leading to the activation of Rlk are analogous to those required for the other Tec family kinases. However, our data also suggest that the regulation of Rlk has distinct properties.
First, we have observed an in vitro interaction of the amino-terminus of Rlk with the SH3 domains of Src family kinases. Second, we have demonstrated interactions between these molecules in cells co-expressing both Rlk and the Src family kinase, Fyn. The two kinases can be immunoprecipitated when co-expressed. Moreover, co-expression with Fyn, as well as other Src family kinases (data not shown), leads to increased phosphorylation of Rlk and activation of the Rlk kinase, in agreement with observations made with other Tec family members.
It has been proposed that Src kinases activate Btk through phosphorylation of a tyrosine, Y551 in the activation loop of Btk, leading to increased kinase activity and autophosphorylation of a tyrosine in the SH3 domain. These patterns of Btk phosphorylation have been observed upon cross-linking of IgM, arguing that this pathway is functional in the signal transduction from antigen receptors [23,37,38]. Our mutational analysis of Rlk supports a similar mechanism for activation of Rlk by Src family kinases downstream of the TCR. Rlk kinase activity is increased by Src family kinase-mediated phosphorylation of a conserved tyrosine, Y420, equivalent to Y551 in the activation loop of the kinase domain of Btk. Mutation of this site causes a reduction in tyrosine phosphorylation and kinase activity of Rlk, which is not substantially enhanced upon co-expression with Fyn or upon TCR stimulation. Thus, this Src kinase phosphorylation site appears to be important for activation after TCR stimulation. Mutation of a second tyrosine, equivalent to the putative autophosphorylation site of Btk, slightly reduces tyrosine phosphorylation and kinase activity of Rlk. However, phosphorylation and kinase activity of this mutant still can be enhanced after co-expression with Fyn. Thus, despite its unique amino terminus, Rlk utilizes a transphosphorylation activation mechanism similar to other Btk family members.
Although our original SH3 domain binding experiments suggested a specific interaction between Tec kinases and the Src kinases Fyn, Lyn and Hck, we have been able to observe both activation by and co-precipitation with other Src family kinases including Lck and Src in 293T cells (data not shown). Thus, in vivo, interactions with Rlk may not be restricted to a particular subset of Src family kinases. Indeed, we have found that mutation of the proline-rich region did not abolish Rlk co-precipitation with either Fyn or Lck (data not shown), suggesting that interactions between these kinases may not occur solely through an SH3 mediated interaction, at least in the 293T expression system. Nonetheless, whether there is a specific connection between Rlk and the Src family kinase Fyn in T cells remains an interesting question. Recent data suggests that phosphorylation of the T cell adaptor molecule SLP-76 occurs after stimulation of T cells with altered peptide ligands in a Fyn-dependent manner that is independent of the adaptor molecule LAT [39,40]. Notably, Rlk has also been found to be capable of phosphorylating SLP-76 . It will be of interest to determine whether Rlk participates in this novel activation pathway.
While Rlk is phosphorylated similarly to Btk and Itk, there are marked differences between these two kinases. Perhaps the most obvious of these differences is the lack of the pleckstrin homology domain in Rlk. Data suggest that membrane association of Itk and Btk requires the interaction of their PH domains with products of PI3K, thereby facilitating phosphorylation by Src family kinases [27,28]. In contrast, we have recently demonstrated that PI3K inhibitors do not alter activation of Rlk by Fyn, suggesting that the requirements for activation of Rlk by Src family kinases are distinct from the other Tec kinases. It is also of note that we can reproducibly co-immunoprecipitate Rlk and Fyn, perhaps due to their association with RAFTs, whereas we have been unable to co-precipitate Itk with Src family kinases when co-expressed in 293T cells (data not shown), again demonstrating distinct properties of the Rlk protein compared to certain other members of the Btk family. The combination of similar and distinct features is further supported by the observation that TXK can rescue phospholipase C-γ activation in BTK deficient DT40 cells, but fails to rescue a defect in apoptosis .
Interestingly, we also find that the full-length form of Rlk has a higher basal level of tyrosine phosphorylation and kinase activity than Itk when expressed in heterologous cells, consistent with potentially different localizations and upstream interactions (unpublished observations). The full-length isoform of Rlk also exhibits higher tyrosine phosphorylation and kinase activity than the short isoform. This differential phosphorylation does not appear to result solely from a distinct phosphorylation site on the full-length Rlk, since mutation of the only additional tyrosine found in the full-length Rlk (Y6) does not greatly reduce the phosphorylation or activity of Rlk when expressed either alone or in conjunction with Fyn. Instead, the increased phosphorylation may result in part from distinct properties of full-length Rlk. Indeed, we report here that the palmitoylated cysteine-string is responsible for the targeting of Rlk to RAFTs: detergent-insoluble, glycolipid-enriched membrane microdomains that contain many signaling molecules, including Src family kinases. Our data may provide the first demonstration that a cysteine-string motif can lead to protein association with RAFTs. Of note, Itk and Btk have been found to be associated with lipid RAFTs upon activation of antigen receptors [29,35]. However, the association of Itk with RAFTs requires its PH domain and is dependent on the products of PI3K. Indeed, in Jurkat cells, which are deficient in the inositol phophatase PTEN, Itk is constitutively associated with the membrane unless the cells are treated with inhibitors of PI3K or transfected with PTEN . In contrast, we have found that Rlk association with RAFTs, like its activation by Src family kinases, is PI3K independent. Thus, although Rlk, like Itk and Btk, is activated by phosphorylation by Src family kinases and can be found in RAFTs, its requirements for this activation may be unique.
Co-expression of Rlk and Fyn also led to a rapid disappearance of Rlk from the detergent soluble fraction as measured by pulse-chase analysis (Fig. 5). This phenomenon could result from either a change in protein location to a detergent-insoluble fraction or increased turnover of Rlk. Activation of tyrosine kinases and other signal transduction molecules is associated both with changes in subcellular distribution and with changes in protein stability. For example, crosslinking of the T-cell receptor results in a transition of the receptor complex to a detergent-insoluble fraction [43,44,45], as well as to increased turnover of TCR components . Nonetheless, the decreased half-life of Rlk in both detergent-soluble and insoluble fractions argues that activation of Rlk leads to increased degradation of the Rlk protein, similar to that observed for other components of the TCR complex, but not previously reported for Tec family kinases. The dependence of this increased turnover on phosphorylation of Rlk suggests that a phosphotyrosine-dependent association with another molecule may be required for this process, reminiscent of the increased degradation of the PDGF receptor and Syk caused by association with the ring-finger protein Cbl [47,48,49] or the Lck-dependent degradation of the TCR .
Recent evidence from gene-targeted mice suggests that Rlk may synergize with Itk in signaling from the T cell receptor to activate phospholipase C-γ . The similarity of the phosphorylation of Rlk by Src family kinases to that which activates other Tec kinases suggests that Rlk also functions downstream of Src kinases in TCR signal transduction pathways. Rlk and Itk, may therefore function together in these TCR signaling events in a fashion similar to Btk in BCR signaling. Recent data argue that Itk interacts directly with Slp-76 and Grb2 to participate in a LAT-nucleated T cell signaling complex involved in PLC-γ activation [5,29]. It will be of interest to examine the interactions of Rlk with other components of this complex. Indeed, the potential in vitro binding of the amino-terminus of Rlk to the SH3 domain of Grb2 hints of similar protein interactions. Thus, although Rlk appears to be distinct among the Tec kinases in the lack of a PH domain, the presence of a palmitoylated cysteine string and the existence of a shorter isoform that can localize to the nucleus, Rlk may contribute to similar signaling pathways. Indeed, our data suggest that the cysteine string may serve as a surrogate to the PH domain for targeting Rlk to RAFTs. It is also notable that recent data suggest that Btk can translocate to the nucleus upon B cell activation, similar to the nuclear translocation we have reported for Rlk [19,51]. Nonetheless, the PI3K independence of the activation of Rlk activation and its association with RAFTs suggests that Rlk may also have distinct contributions to these signaling pathways.
Materials and Methods
Cell Culture and Reagents
293T and HeLa cells were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal calf serum, penicillin, streptomycin, and 10 mM glutamine. Jurkat cells expressing SV40 large T antigen (Jurkat Tag) were a generous gift from Dr. Gerald Crabtree (Stanford) and were maintained in RPMI 1640 supplemented with 10% fetal calf serum, penicillin, streptomycin, glutamine, and 50 μM 2-mercaptoethanol. Anti-murine Rlk was previously described. Anti-Fyn (FYN3) was purchased from Santa Cruz Biotechnology (Santa Cruz, CA); anti-phosphotyrosine (4G10) from Upstate Biotechnologies (Lake Placid, New York).
Constructs were introduced into 293T cells by calcium phosphate transfection in medium containing 25 μM chloroquine (Sigma) . 2-5 μg of each plasmid was used for each transfection (2 × 106 cells); the cells were harvested 24 to 36 hours later. Transfections into HeLa cells were performed identically, without the addition of chloroquine. Jurkat Tag cell lines (107 cells) were transfected by electroporation using a Biorad electroporator at 250 V and 960 μF or by square wave electroporation on a BTX 830 using settings of 300 V and 10 ms. 24 hours later, cells were stimulated with OKT3, lysed and Rlk analyzed as below.
Constructs and Mutagenesis
Full-length Rlk cDNA expression constructs pCIR, pcDNA3Rlk and Rlk-GFP have been described previously . Point mutations were introduced into Rlk-GFP by a PCR based strategy  with oligonucleotides encoding the required mutations (Mutated residues are in bold): Y420F (GGAC GAT GAA TTC ATC AGT TCT TCT G), Y91F (GTC AAG GCT CTT TT T GAC TTC CTG CC). All mutations were confirmed by dideoxy sequencing. pLNCX-FynT was a generous gift from Dr. Cliff Lowell (USCF, San Francisco, CA). Glutathione S-Transferase (GST) fusion constructs were previously described .
In vitro filter binding assays
GST-Rlk fusion proteins were grown and induced as previously described . Bacteria were sonicated in phosphate-buffered saline (PBS), Ph7.4 with 0.1% Triton X-100, insoluble material removed by centrifugation for 10 minutes at 14,000 rpm and soluble GST fusion proteins purified with GST-Sepharose beads (Pharmacia). Approximately 2 μg of GST fusion proteins were separated by SDS-PAGE, transferred to Nitrocellulose and probed with biotinylated SH3-GST fusion proteins as previously described .
HeLa cells were transfected with Rlk and Fyn expression constructs, 20 hours later passed onto coverslips and 12-24 hours later fixed with 1% paraformaldehyde for 10 minutes at room temperature. Cells were stained with Fyn3 antiserum at 1: 500, washed with PBS and stained with Texas Red conjugated anti-Rabbit Goat serum (Cappel). Nuclei were counterstained with DAPI, cells were visualized on a Zeiss Axioplan microscope with a Charge Coupled Device (CCD) camera.
Western Blotting and Immunoprecipitation
24 hours following transfection cells were washed once with PBS and lysed in NP40 Lysis Buffer (0.5% Nonidet-P 40, 50 mM HEPES pH 7.4, 5 mM EDTA, 50 mM NaCl, 10 mM NaPO4, 50 mM NaF, 1 mM sodium orthovanadate, 1 mM AEBSF, 2 ug/ml aprotinin) for 10 minutes on ice. Total protein extracts were directly mixed with 2X SDS protein sample buffer (1X: 50 mM Tris pH 6.8, 2% SDS, 10% glycerol, 0.1% Bromphenol Blue plus 5% B-mercaptoethanol). Alternatively, lysates were clarified by centrifugation and detergent-soluble protein was analyzed. Equivalent amounts of protein were boiled in SDS sample buffer and separated by 10% SDS-PAGE and transferred onto nitrocellulose (Schleicher and Schuell). The membranes were blocked in TBST (10 mM Tris-HCl pH 8.0, 150 mM NaCl, 0.1% Tween-20) with 5% nonfat dry milk (w/v). The membranes were incubated with the appropriate primary antibody at 1/2000 (anti-Rlk and 4G10, anti-phosphotyrosine) or 1:1000 (anti-Fyn) dilution overnight at 4°C or 1-2 hours at room temperature. Membranes were washed in TBST, incubated with the appropriate secondary antibody at 1/10000 dilution (Boehringer Mannheim) for 1 hr and protein was visualized by enhanced chemiluminescence (Amersham).
For immunoprecipitation studies, equivalent amounts of detergent soluble protein were incubated with affinity purified anti-Rlk sera for 2-4 hours at 4°C. The complexes were recovered with Protein A-Sepharose (Sigma) and washed two times with ice cold NP40 wash buffer (1% NP40, PBS, 1 mM sodium orthovanadate) and analyzed by Western blotting using either anti-Rlk serum or anti-Fyn serum (1:1000).
In Vitro Kinase Assays
Cell extracts were prepared in NP40 Lysis Buffer and immunoprecipitated as described above. Complexes were recovered with Protein A Sepharose, washed twice with ice cold NP40 wash buffer, washed twice with ice cold Rlk kinase buffer (30 mM HEPES pH 7.4, 150 mM NaCl, 5 mM MgCl2, 5 mM MnCl2, 100 μM sodium orthovanadate). The kinase reaction was carried out in kinase buffer supplemented with 1 μg acid denatured enolase and 10 μCi of [γ-32P] ATP (Redivue, Amersham) for 5 minutes at room temperature. The reaction was quenched with SDS sample buffer, boiled and separated by 10% SDS-PAGE. Phosphorylated proteins were detected by autoradiography or quantified on a PhosphoImager. The level of Rlk protein was analyzed by immunoblotting.
Jurkat Tag cells were transfected by square wave electroporation using the parameters of 300 V and 10 ms. For each condition 8 cuvettes containing 107 cells in 0.5 ml were electroporated with 25 μg of the appropriate DNA. Cells were grown over night in RPMI containing 20% fetal calf serum. In some experiments, cells were pretreated with Wortmannin (100 nM) for 3 hrs prior to fractionation. For TCR stimulation, cells for each condition were concentrated into 0.5 ml, warmed to 37°C for 10 minutes and then treated with 10 μg OKT3. Ice cold PBS was added to the cells after 2 minutes OKT3 treatment and the cells were quickly pelleted and lysed in 0.5 ml TENV (10 mM Tris 7.5, 150 mM NaCl, 5 mM EDTA, 1 mM Na3VO4) containing 1% Triton X-100. The cells were homogenized with 12 strokes in 2 ml Dounce homogenizers after 30 minutes of incubation on ice. Homogenates were adjusted to 40% sucrose by addition of TENV containing 80% sucrose. The lysate was transferred to a TLS55 ultracentrifuge tube, over-layered sequentially with 30% and 5% sucrose in TENV. Sucrose gradients were centrifuged at 200,000 g for 16 hours and 200 μl fractions were removed from the top of the gradient for analysis by SDS-PAGE.
Metabolic Labeling and Pulse Chase
5 × 106 293T cells were transfected with 10 μg of the indicated Rlk construct and 10 μg of empty vector or the indicated Fyn construct. Twenty four hours after transfection, the cells were split equally among five to seven plates and grown in complete DMEM for another 24 hours. The cells were placed in serum-free Met(-), Cys(-) DMEM for 1 hour prior to pulse labeling. Cells were pulse labeled with 0.5 mCi of Trans- [35S]-Label (ICN) in 0.5 ml of Met(-)Cys(-) medium for 15 minutes at 37°C. After 15 minutes, the monolayers were chased with complete DMEM supplemented with 20 mM unlabeled methionine and cysteine (Sigma) at 37°C. At the indicated chase time, the cells were lysed with 1 ml cold NP40 Lysis Buffer and the lysates were clarified by centrifugation. Rlk was immunoprecipitated with affinity purified anti-Rlk antibody for 3 hours at 4°C and immune complexes were recovered with Protein A-Sepharose, washed as described above, and boiled in SDS-sample buffer. Labeled proteins were separated by 10% PAGE, and analyzed by fluorography.
Mario Chamorro, Michael J Czar and Jayanta Debnath are equal contributors to this article.
P.L.S. was a Special Fellow of the Leukemia Society of America and is presently a Searle Scholar. M.C. is presently in the Program in Cell Biology, Cornell Weill-Sloan Kettering Institute Graduate Program. The authors would like to thank D. W. McVicar, R. Wange and members of the Schwartzberg, Varmus and Lenardo laboratories for critical feedback and L. Matis for the original Rlk cDNA clone.
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