Multiple relapses of Plasmodium vivax malaria acquired from West Africa and association with poor metabolizer CYP2D6 variant: a case report
Plasmodium vivax transmission in West Africa, dominant for the Duffy-negative blood group, has been increasingly recognized from both local residents as well as international travelers who contracted P. vivax malaria there. However, the relapsing pattern and sensitivity to antimalarial treatment of P. vivax strains originated from this region are largely unknown. There is evidence that the efficacy of primaquine for radical cure of relapsing malaria depends on host factors such as the hepatic enzyme cytochrome P450 (CYP) 2D6.
A 49-year-old Chinese man was admitted to the Shanglin County Hospital in Guangxi Province, China, on December 19, 2016, 39 days after he returned from Ghana, where he stayed for one and a half years. He was diagnosed by microscopy as having uncomplicated P. vivax malaria. Treatment included 3 days of intravenous artesunate (420 mg total), and 3 days of chloroquine (1550 mg total), and 8 days of primaquine (180 mg total). Although parasites and symptoms were cleared rapidly and he was malaria-negative for almost two months, he suffered four relapses with relapse intervals ranging from 58 to 232 days. The last relapse occurred at 491 days from his first vivax attack. For the first three relapses, he was treated similarly with chloroquine and primaquine, sometimes supplemented with additional artemisinin combination therapies (ACTs). For the last relapse, he was treated with intravenous artesunate, 3 days of an ACT, and 7 days of azithromycin, and had remained healthy for 330 days. Molecular studies confirmed P. vivax infections for all the episodes. Although this patient was diagnosed to have normal glucose-6-phosphate dehydrogenase (G6PD) activity, his CYP2D6 genotype corresponded to a *2A/*36 allele variant suggesting of an impaired primaquine metabolizer phenotype.
This clinical case suggests that P. vivax malaria originating from West Africa may produce multiple relapses extending beyond one year. The failures of primaquine as an anti-relapse therapy may be attributed to the patient’s impaired metabolizer phenotype of the CYP2D6. This highlights the importance of knowing the host G6PD and CYP2D6 activities for effective radical cure of relapsing malaria by primaquine.
KeywordsPlasmodium vivax West Africa Relapse pattern Primaquine failure CYP2D6
Artemisinin-based combination therapy
Center for Disease Control
Directly observed therapy
Restriction fragment length polymorphism
Plasmodium vivax is geographically the most widely distributed malaria parasite, and was responsible for about 14.3 million malaria cases in 2017 in the world . Malaria in Southeast Asia and South America is dominated by P. vivax; in Africa, P. vivax is much less common than the overwhelming number of P. falciparum cases. Historically, it has been considered extremely rare or “absent” in Central and West Africa because of the dominance of the Duffy-negative blood group, which was regarded as a receptor required for the invasion of the erythrocytes by P. vivax . In recent years, there is growing evidence documenting P. vivax infections in local residents of Central and West Africa as well as international travelers returning from the regions to malaria-free countries [3, 4]. In China, for example, of the 909 imported P. vivax cases in 2012, 122 originated in 21 Central and West African countries . These records provide compelling evidence of widespread P. vivax transmission in Africa. Notably, the identification of P. vivax strains able to infect Duffy-negative individuals [6, 7, 8] demonstrates that Duffy negativity is not a definitive barrier to vivax transmission. In addition, the presence of very few Duffy-positive hosts in these populations may be enough to sustain low-level transmission of P. vivax malaria in these regions. The considerable number of vivax cases routinely diagnosed among Duffy-positive international travelers acquired in West and Central Africa implies hidden local transmission of P. vivax malaria in these regions despite predominance of Duffy negativity.
Historically, P. vivax malaria has been called a “benign tertian malaria,” but this is a misnomer, given that recent studies have demonstrated severe and fatal pathologies associated with P. vivax malaria [9, 10]. Relapses caused by the liver hypnozoites of this parasite can occur months or even several years after the primary attack, thereby contributing to additional morbidity and potentially onward transmission that impedes malaria elimination. In Papua New Guinea, it was estimated that 80% of acute incident vivax infections was derived from relapses rather than new mosquito-borne infections .
In most P. vivax-endemic areas, chloroquine/primaquine (CQ/PQ), offering blood schizontocidal and hypnozoitocidal therapy, has been used for more than 60 years and remains the frontline radical cure for uncomplicated vivax cases in most regions (excepting Southeast Asia where resistance to chloroquine commonly occurs) . The standard treatment regimen includes three days of CQ (total 25 mg/kg) plus fourteen daily dosages of PQ (0.25 mg/kg). However, PQ imposes a serious problem of toxicity in patients with glucose-6-phosphate dehydrogenase (G6PD) deficiency, an X-linked enzymopathy that can be highly prevalent in endemic areas. As a result, without testing G6PD status of the patients, health providers often do not offer PQ for fear of potentially severe hemolysis. When PQ is prescribed without direct supervision, adherence to the 14-day regimen is poor . To improve adherence, China recommends a shorter 8-day course of PQ regimen (0.375 mg/kg/day; total dose of 3.0 mg/kg) for relapsing malaria (http://www.chinacdc.cn/tzgg/201109/t20110906_52137.htm). Although the 8-day PQ regimen has not been rigorously tested in clinical trials, earlier studies indicate that the temperate P. vivax strains from Korea are completely susceptible to a total dose of 3.5 mg/kg .
Another problem that affects the effectiveness of PQ for radical cure of vivax malaria involves the host hepatic enzyme cytochrome P450 (CYP) 2D6 , which mediates activation of PQ to its active metabolite(s) [16, 17]. CYP2D6 is involved in the metabolism of > 20% prescribed medicine. It is noteworthy that CYP2D6 is the member of the CYP450 family having the greatest genetic polymorphism [18, 19]. The frequencies of alleles with reduced function are as high as 50% in some Asian populations , although contributions of different CYP2D6 alleles to PQ failures still need to be firmly established [21, 22]. In clinical trials to assess the effectiveness of PQ for preventing relapses, even under directly observed high-dose PQ therapy, as many as 13.9% P. vivax patients experienced relapses [23, 24]. Using genotyping and dextromethorphan metabolism phenotyping of CYP2D6 polymorphism in those subjects, Baird et al. documented almost all of those treatment failures to be associated with impaired CYP2D6 function .
Here we describe multiple relapses of a case of vivax malaria acquired in West Africa that also appears to be associated with impaired CYP2D6 metabolism of PQ.
The timeline of the P. vivax attacks for the patient and antimalarial treatment
Days from previous attack
Days from the 1st attack
Axillary temperature (°C) on admission
R, H, B, C
R, H, B
R, H, B
R, H, B
R, H, B
Parasitemia (%) on admission
CQ/PQ + AS (420 mg)
CQ/PQ + AS (660 mg); ACT1
CQ/PQ + AS (660 mg); ACT2
AS (660 mg) + AZ (3500 mg); ACT2
Fever clearance time (h)
The second attack of febrile paroxysm occurred 58 days later on February 15, 2017, and he was admitted to the county hospital again with similar symptoms as the first attack and diagnosed with P. vivax malaria by microscopy (Table 1). The patient had not left Guanxi Province during the 58 days between these two attacks. He was hospitalized for six days and was treated with the same CQ/PQ combination, together with eleven IV injections of artesunate (total dose of 660 mg at an interval of 12 h). Given that the doctor was not sure whether this re-occurrence was due to chloroquine resistance or potential mixed infection with P. falciparum, at discharge he was given additional three days of an artemisinin-based combination therapy (ACT), artesunate-amodiaquine, which has a different aminoquinoline drug. Both ACT and PQ were administered as DOT by local CDC staff.
One hundred and thirteen days later, on June 8, 2017, he suffered a third attack of confirmed P. vivax malaria and hospitalized at the county hospital for six days. He received the same therapy as for the second attack including DOT of 8-day PQ. At home, he was further treated with three days of a different ACT, dihydroartemisinin-piperaquine.
Eighty-eight days later, on September 4, 2017, he suffered a fourth attack of confirmed vivax malaria. This time he was not hospitalized, while the same CQ/PQ regimen together with three days of oral therapy of dihydroartemisinin-piperaquine was prescribed. All treatments were taken at home and supervised by local CDC staff.
Despite the fact that, after returning from Ghana, this patient lived the entire time in a malaria-free area, he had the fifth attack of vivax malaria 232 days later, on April 24, 2018, 491 days from the first attack. He was admitted to the county hospital for three days and was given IV injection of artesunate six times at a 12 h interval (120 mg each at the first three injections, and 60 mg each at the three subsequent injections). PQ was not prescribed since it was judged not effective. Instead, he was treated with azithromycin (500 mg/day) for seven days. At discharge, he was also given three additional days of dihydroartemisinin-piperaquine. At the time of this interview, he had remained healthy for 330 days after this last episode of vivax malaria.
Venous blood was collected at the time of diagnosis at the first, second, third, and fifth attacks. Blood samples were used for molecular diagnosis and genotyping at the Kunming Medical University laboratory. For each sample, total DNA was extracted from 0.2 mL of venous blood using the High Pure PCR Template Preparation Kit (Roche, Switzerland) following the manufacturer’s instruction and eluted in 100 μl of water. Plasmodium species were identified by nested PCR targeting the 18S rRNA genes using genus-specific and species-specific primers for P. falciparum, P. vivax, P. malariae and P. ovale . The PCR results showed that all the samples were positive only for P. vivax (data not shown).
Since the effectiveness of PQ for radical cure of vivax malaria is influenced by host CYP2D6 activity, we wanted to determine whether the failure of PQ in this case might be linked to CYP2D6 genotypes suggestive of poor metabolizer of PQ. The single nucleotide polymorphisms (SNPs) in CYP2D6 were determined by PCR amplification of the full-length CYP2D6 coding region using a high-fidelity enzyme and sequencing of the PCR products, similar to a method described earlier . Primary PCR was performed using primers P1 (5′-CTGGCAGCACAGTCAACA-3′) and P2 (5′-TTTGTCTTCCGTTTTGGG-3′), while nested reactions were done with primers N1 (5′-ATAAGGGAAGGGTCACGC-3′) and N2 (5′-GGCAAGGGTAACTGACATCT-3′). The following PCR conditions were used: initial denaturing at 95 °C for 3 min, 35 cycles of 95 °C for 15 s, 53 °C (58 °C for nested reactions) for 15 s, and 72 °C for 5 min, and final extension at 72 °C for 5 min. PCR and sequencing of CYP2D6 detected mutations 214G > C, 221C > A, 223C > G, 227 T > C, 232G > C, 233A > C, 245A > G, 310G > T, 745C > G, 842 T > G, 1662G > C, 2851C > T, 3385A > C, 3585G > A, 3791C > T, 4181G > C, and 4482G > A, which are classified as *2A, and mutations 100C > T, 310G > T, 842 T > G, 1038C > T, 1662G > C, 2098A > G, 3385A > C, 3583A > G, 4125G > C, 4129C > G, 4132A > G, 4134 T > C, 4156C > T, 4157A > C, 4159G > C, 4165 T > G, 4167 T > C, 4168G > A, 4169C > G, 4170 T > C, 4173C > T, and 4181G > C, which are classified as *36. According to the CYP2D6 allele naming database (www.Pharmvar.org/gene/CYP2D6), the patient’s CYP2D6 genotype corresponds to a *2A/*36 allele variant. CYP2D6*2A is predicted to be functionally normal (score 1), but *36 is non-functional (score 0). Thus, the overall genotype activity score was 1, suggesting that this patient’s CYP2D6 was an impaired PQ metabolizer phenotype . Real-time PCR was performed to determine the CYP2D6 gene copy number using a previously described method , and the result showed that CYP2D6 gene in this patient was a single copy.
Discussion and conclusions
We documented a P. vivax infection acquired in West Africa producing four relapses with the last relapse occurring at 491 days after the first attack. This study suggests that although vivax malaria is considered to be exceedingly rare in West Africa because of predominance of Duffy-negativity in the local human population, there is a considerable hazard for Duffy-positive travelers to acquire relapsing malaria parasites in this region. This malaria case provides evidence indicating that P. vivax strains from West Africa may produce multiple relapses extending beyond one year but less than two. The relapse patterns of P. vivax strains from different geographical regions can vary significantly, from the tropical ‘frequent-relapse phenotype’ to the temperate “long-latency” phenotype’ . The relapse intervals of this Western African strain ranged from 58 days to 232 days. This is quite different from the relapsing patterns of P. vivax strains from the tropical Pacific region such as the Chesson strain, which relapse quickly but typically do not extend beyond one year . This patient stayed the entire time after returning from Ghana in Guangxi, a malaria-free area after 2012 , thus the possibility of new infections was highly improbable but could not be ruled out since Guangxi borders with Vietnam and Yunnan, where very low-level transmission of P. vivax occurred. Furthermore, genotyping of the parasites by PCR-RFLP of PvMsp3a gene indicates that the first two relapses had the same genotype as the primary infection, although the parasite from the fourth relapse had a different genotype. This suggests that the initial inoculum might include more than one strain of P. vivax as sporozoites from one oocyst in the mosquito may comprise sibling progeny of a single gametocyte mating event, or that he had multiple infections during his stay in Ghana. It is not uncommon that relapses and primary infections are genotypically different and relapses often result from activation of heterologous hypnozoites [32, 33].
Despite the fact that this Chinese patient received PQ treatment each time he had acute P. vivax infection, PQ therapy failed to prevent subsequent relapses. The excessive blood schizonticides given to this patient were not rational and did not prevent relapses. There are a number of possible reasons for the PQ treatment failures. One possibility is that the 8-day PQ treatment is able to prevent relapses for the temperate P. vivax strain  and the subtropical strains  in China, but may be ineffective against West African P. vivax. It is noteworthy that although the daily adult dose for the 8-day PQ regimen (22.5 mg) is higher than for the standard 14-day regimen (15 mg/day), the total PQ dosage for the 8-day course (180 mg) is lower than for the 14-day course (210 mg). In addition, since the 8-day PQ regimen (0.375 mg/kg/day) is calculated for adults weighing 60 kg, this patient was also slightly under-dosed (0.32 mg/kg/day). Currently, there are no clinical studies testing the effectiveness of PQ treatment against relapses of West African P. vivax strains. In Shanglin County Hospital, of 105 P. vivax patients who received the 8-day PQ regimen between 2013 and May 2019, four patients (3.8%) had relapses, suggesting that the 8-day PQ regimen worked at least partially for preventing relapses of P. vivax parasites. Another possibility for the PQ failure lies in the patient’s CYP2D6 enzyme, which is known to metabolize PQ to its active metabolite(s) for the hypnozoitocidal activity of PQ . This patient has a CYP2D6 *2A/*36 genotype, which corresponds to being an impaired PQ metabolizer phenotype. CYP2D6 intermediate and poor metabolizer phenotypes have been linked to poor treatment outcome of PQ anti-relapse therapy in clinical trials [15, 25]. Subjects with an activity score phenotype of 1.0 for CYP2D6 have shown variable responsiveness to PQ therapy against relapse of P. vivax; among the 7 patients evaluated by Bennett et al., none relapsed, whereas among the 22 patients evaluated by Baird et al., 12 relapsed [15, 25]. Although our patient may seem to have been administered a normally inadequate regimen of primaquine, he received it four times delivering a total dose of 720 mg (10.3 mg/kg) that failed to prevent relapse. Interestingly, a case report showed that repeated relapses of vivax malaria acquired in Papua New Guinea also were likely attributed to the patient’s intermediate metabolizer phenotype of the CYP2D6 allele (*5/*41) . The current case of P. vivax malaria acquired in West Africa adds further support to the importance of the CYP2D6 polymorphisms for the effectiveness of the PQ anti-relapse therapy. With the demonstrated efficacy of a single-dose tafenoquine in preventing relapses of vivax malaria  and the seemingly lack of effects of CYP2D6 on tafenoquine , tafenoquine may be the choice of anti-relapse medicine in G6PD normal patients. It nonetheless remains uncertain whether tafenoquine is CYP2D6-dependent or not.
We want to thank the staff at the Shanglin Hospital for collecting data on hematology and blood chemistry for the vivax patient, and local CDC personnel for the directly observed therapy.
XH, WZ, LP, and LZ: Molecular diagnosis, designing, writing and editing of manuscript. MP, CZ, YQ, PQ, YL and YH: Diagnosis and management of patient and editing of manuscript; and JKB, YH, LC and ZY: Overall coordination, study design, writing and revision of manuscript. All authors read and approved the final manuscript.
This study was supported by the National Institute of Allergy and Infectious Diseases, National Institutes of Health USA (U19AI089672). ZY was supported by grants (31860604 and U1802286) from the National Natural Science Foundation of China and by a grant (2018ZF0081) from Major Science and Technology Projects of Yunnan. CZ was funded by a grant from the Youth Fund Project of People’s Hospital of Guangxi Zhuang Autonomous Region, China (QN2017–10). MP was funded by a grant (ZC20153012) from the Science and Technology Bureau Programs of Nanning, Guangxi, China. The funding bodies had no role in design of the study, analysis and interpretation of the data, and writing of the manuscript.
Ethics approval and consent to participate
The clinical study of malaria involving human subjects was approved by the Institutional Review Board of Kunming Medical University IRB#KMC2012–01, KMC2017–01). Written informed consent was obtained from the patient.
Consent for publication
Written informed consent for publication of clinical details was obtained from the patient.
The authors declare that they have no competing interests.
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