Abstract
The use of MALDI MS as a fast and direct method to detect the Aβ oligomers of different masses is examined in this paper. Experimental results suggest that Aβ oligomers are ionized and detected as singly charged ions, and thus, the resulting mass spectrum directly reports the oligomer size distribution. Validation experiments were performed to verify the MS data against artifacts. Mass spectra collected from modified Aβ peptides with different propensities for aggregation were compared. Generally, the relative intensities of multimers were higher from samples where oligomerization was expected to be more favorable, and vice versa. MALDI MS was also able to detect the differences in oligomeric composition before and after the incubation/oligomerization step. Such differences in sample composition were also independently confirmed with an in vitro Aβ toxicity study on primary rat cortical neurons. An additional validation was accomplished through removal of oligomers from the sample using molecular weight cutoff filters; the resulting MS data correctly reflected the removal at the expected cutoff points. The results collectively validated the ability of MALDI MS to assess the monomeric/multimeric composition of Aβ samples.
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Introduction
Alzheimer’s disease (AD) is a progressive neurodegenerative disorder characterized by deterioration in cognition, memory, and behavior [1, 2]. With more than 5 million North Americans suffering from this disease [3], AD is now considered the most common cause of dementia, and the sixth leading cause of death in the USA [4]. The adverse neuropsychiatric and behavioral symptoms patients suffer from pose as a significant strain on our health care system, and give rise to socioeconomic issues. Hallmarks of the disease include extracellular plaques characterized by the accumulation of protein-containing deposits primarily consisting of amyloid-β (Aβ) peptides and intracellular neurofibrillary tangles caused by aberrant phosphorylation of tau [5,6,7]. Previous work found that these large fibrillary Aβ structures within neuritic plaques killed cultured neurons [8]. This and other evidence led to the amyloid cascade hypothesis which originally postulated that these insoluble fibrillary aggregates were the primary cause of neurodegeneration in AD patients [9]. Although extensive research has targeted these plaques, poor correlation between neurological deficits and plaque accumulation have been observed in AD patients [10, 11].
Recent studies have shifted focus to examine the onset of Aβ aggregation from the monomeric peptides to the soluble form of Aβ multimeric complexes, and found evidence linking the accumulation of the Aβ oligomers to the progression and severity of AD, in particular, with long-term hippocampal, age-onset memory failures [5, 6, 12,13,14,15]. Due to these recent findings, modifications to the amyloid cascade hypothesis have been made to target the role of soluble Aβ oligomers in disease progression [16,17,18]. In healthy individuals, Aβ peptides are degraded within or cleared from the brain [19, 20]. Reduction in the degradation or clearance efficiency results in accumulation of the soluble oligomers that correlate with disease onset and progression. Understanding the mechanisms and effects of Aβ oligomerization in the brain is therefore critical to the development of novel therapeutics for AD. A common experimental approach is the in vitro toxicity assay of Aβ oligomers on neuron cell cultures, where cellular viability is quantified to determine the effects of various forms of Aβ and/or potential therapeutics [21,22,23,24,25]. The Aβ samples for the in vitro experiments are typically obtained from commercial sources. Numerous protocols have been reported for in vitro oligomeric Aβ1–42 preparations with the largest variation residing in the monomerization and oligomerization solutions used [26,27,28,29]. Surprisingly, to our knowledge, comprehensive studies examining the effect of protocol conditions on the resulting oligomer size distribution are not available in the literature. In addition, it is not a common practice to verify the composition of the Aβ oligomers prior to use, partly due to the limitations in techniques available for fast and simple Aβ multimer characterization.
Currently, the most common means for oligomer quantification is gel electrophoresis [30]. The technique depends on the ability for SDS to bind to proteins of interest. This binding compromises the structural integrity of proteins resulting in dissociation of oligomer composition [31]. Low sample throughput and prevalence of gel smearing are also significant issues which act as limitations in resolution and possess accuracy issues [32]. Another prominent issue gel electrophoresis possesses is the inability to accommodate for a large mass range for multimer analysis. The percent composition of acrylamide within the gel is tailored for the target sample. The larger the peptide or protein under analysis is, the lower the amount of acrylamide used in order to facilitate appropriate separation to obtain distinct bands. For samples containing a wide range of molecular weights, the set acrylamide concentration could not optimally accommodate for both extremes, resulting in either the smaller molecular weight peptides to run off the gel, or poor resolution of the larger peptides. Other techniques available to study Aβ aggregation include atomic force microscopy (AFM), surface plasmon resonance (SPR), absorbance, and fluorescence [33, 34]. AFM is generally suitable for detection of large Aβ aggregates such as fibrils, but not the soluble small oligomers. SPR is typically used to detect interactions in amyloid-ligand binding, but ligand interaction is not selective enough to differentiate oligomers by size. Likewise, absorbance and fluorescence can detect the bulk presence of oligomers, but lacks the ability to differentiate between small size differences of Aβ oligomers.
Chemical cross-linking could be used to stabilize protein-protein interactions. Several methods of cross-linking have been explored in the attempt to freeze Aβ oligomers in current oligomerization states. However, many of these methods require addition of cross-linkers or catalyst to induce cross-linking [35, 36]. Introduction of these cross-linkers and catalysts at times can result in modifications of native amyloid composition and structure, or induce further oligomerization leading to fibril formation. Complications also arise from non-specific interactions that occur upon addition of these compounds. Due to the complexity introduction of these reactive moieties generate, photoinduced cross-linking of unmodified proteins (PICUP) was proposed as a means of cross-linking [32, 37]. PICUP induces cross-linking through rapid, visible light photolysis of tris-bipyridyl Ru(II). In the presence of electron acceptors, Ru(III) is produced. Ru(III) then acts as an electron abstraction agent forming carbon radicals which form new C-C bonds with nearby carbons. This form of cross-linking is attractive as it does not require insertion of a cross-linking group to the peptide, and the m/z of the oligomers are not altered by the cross-linking. However, the carbon radical formation and C-C bond formation are non-specific, and can occur between preexisting oligomers with free monomers to form artificially larger oligomers [38]. Importantly, the observed cross-linked oligomer distribution is highly dependent on the cross-linking conditions of protein-to-Ru ratio and the power and duration of the photoillumination [39]. Finally, a separation may be required to remove the high concentration of quenching reagent, mercaptoethanol or dithiothreitol, prior to detection.
Electrospray ionization mass spectrometry (ESI MS) has been widely used as an alternative label free tool for amyloid beta analysis [40,41,42]. ESI is capable of transforming the multimeric forms of amyloidogenic peptides from solvated to gaseous ions as intact non-covalent complexes [43]. However, the resulting complex ions can possess a wide range of multiple charges, for example, z = 2 to 10. Oligomers of different sizes can therefore have identical m/z, making the peak assignment to oligomer sizes a perplexing task [44, 45]. To overcome this, researchers turned to the use of ion mobility spectrometry (IMS), which can resolve the multimeric complex ions, not only by m/z but also according to size based on their mobility in a drift tube [46,47,48]. In recent years, the combination of IMS with ESI MS has become an invaluable tool in deciphering the assembly mechanism of Aβ oligomers [31, 47, 49,50,51,52,53]. While ESI IMS-MS is extremely powerful, the interpretation of two-dimensional data of drift time and m/z is not a straightforward task for multiply charged homo-multimers such as Aβ oligomers. The assignment of signals to oligomer of various sizes involves the consideration of monomer charge states, the 13C isotope distributions with and without collision-induced dissociation, and the drift time dependence of injection energy [50].
The work described herein focuses on a simpler mode of MS based on matrix-assisted laser desorption ionization (MALDI). In contrast to ESI, MALDI generates gaseous ions of peptides and proteins predominately in the singly charge state (z = 1). As a result, the measured m/z values of Aβ oligomers directly represent the mass of the oligomers. To our knowledge, Van Duyne and co-workers presented the first use of MALDI MS to detect oligomers of Aβ1–42 [54], but the use of MALDI MS was not the focus of their work, and only one mass spectrum of the oligomers was presented as a supplementary figure. Also, the adoption of this application has not been observed in the literature. Most importantly, the authors did not present validation experiments to confirm that the observed Aβ complex ion distribution indeed reflect that of original oligomeric Aβ sample solution. Instead, they claimed that “the observed ions are likely a combination of intact molecular ions, fragments from larger oligomers, and gas phase aggregates”. In this paper, we will examine the validity of MALDI MS in measuring the composition of Aβ multimers. Particularly, we aim to investigate whether the oligomers detected by MALDI MS were indeed artificial Aβ complexes non-existent in the original sample, merely a result of the non-specific associations of Aβ peptides, either during sample preparation or during the MALDI process. To achieve this, we begin by reproducing the oligomer detection by MALDI MS with wild-type Aβ1–42 and Aβ1–40, and comparing with the different results obtained from other variants of Aβ peptides with varying tendencies of oligomerization. Secondly, we manipulated the size distribution of Aβ1–40 oligomer samples using molecular weight cutoff filters, and subsequently illustrated the expected changes in the resulting MS data. After validating MALDI MS in measuring Aβ multimeric composition, the method has been applied to examine the Aβ samples prepared using published protocols on monomerization and oligomerization for in vitro toxicity assays.
Methods
Reagents
All Aβ peptides were purchased from Bachem (King of Prussia, PA). They include the wild-type Aβ1–42 and Aβ1–40, a peptide with same amino acid composition but in scrambled sequence Aβ1–40s (AEGDSHVLKE GAYMEIFDVQ GHVFGGKIFR VVDLGSHNVA), the reversed sequence peptide Aβ42–1, and the mutant that has high tendency of oligomerization Aβ1–40(E22Q) (DAEFRHDSGY EVHHQKLVFF AQDVGSNKGA IIGLMVGGVV). Ethanol, methanol, and acetonitrile (ACN) were purchased from Caledon (ON, Canada), and hexafluoro-2-propanol (HFIP), dimethyl sulfoxide (DMSO), sinapinic acid (SA), trypsin, amphotericin B solution, 7% poly-L-ornithine from Sigma-Aldrich (St. Louis, MO). Ham’s F-12 nutrient mixture, B27 supplement, N2 supplement, penicillin/streptomycin, glutamax, and 4′-6-diamidino-2-phenylindole (DAPI) were purchased from Life Technologies (Grand Island, NY). Formic acid, ammonium hydroxide, was obtained from EM Science (Darmstadt, Germany), and trifluoroacetic acid (TFA) was purchased from Fischer Scientific (Ottawa, ON, Canada). Neurons were isolated from Wistar rats purchased from Charles River (Montreal, QC, Canada). Hank’s balanced salt solution (HBSS) and neural basal media were from Wisent (St. Jean-Baptiste, QC, Canada). Trypsin inhibitor was obtained from Roche Life Sciences (Indianapolis, IN), and propidium iodide was purchased from Biotium (Hayward, CA).
Amyloid Beta Sample Preparation
To optimize the monomerization condition, Aβ peptides were suspended in one of the four monomerization solvents, NH4OH, TFA, HCO2H, or HFIP, at a concentration of 1 mM. Our preliminary MALDI MS results revealed that highest peak intensities from the monomer with minimum signals from multimers were obtained with NH4OH (data not shown), and thus was chosen in our work. To prepare for short-term storage, the sample was fractionated in 10-μL aliquots and lyophilized for 1 h at – 100 °C and stored at – 80 °C. To prepare for use, each aliquot of lyophilized powder was resuspended in 10 μL of DMSO and sonicated in a 37 °C water bath for 10 min. The sample was then brought to a concentration of 150 μM with the F12 solvent and vortexed. The final sample solution was incubated at 4 °C for 24 h to allow for oligomerization.
Molecular Weight Cutoff Filtration
Molecular weight cutoff (MWCO) filters at 10 and 30 kDa were purchased from Pall Corporation (Ann Arbor, MI). Aβ sample aliquots of 70 μL were pipetted into each filter and centrifuged four times in 30-s intervals at 14000 rpm with Centrifuge 5417c from Eppendorf (Westbury, NY). Typically, 60–65 μL of filtered sample solution was collected. ThermoFisher Scientific NanoDrop™ Spectrophotometer 2000c (Waltham, MA) was used to assess the final filtrate concentration in five replicates.
Primary Embryonic Rat Cortical Neuron Cultures
Studies were conducted using neurons isolated from embryonic rat brain. Pregnant Wistar rats were sacrificed for surgical removal of E18 embryos. Cortices from each embryo were extracted and placed in 14 mL conical tubes containing 1.8 mL of HBSS and centrifuged at 4000×g for 1 min at room temperature. HBSS was aspirated and 1.8 mL of solution A (71.4% HBSS, 0.086% MgSO4 (1 M), and 28.6% trypsin) was added. The mixture was agitated to ensure that neurons were free floating, and the sample was placed in an automated rotator for 25 min at 37 °C. After rotation, 3.6 mL of solution B (96.0% HBSS, 0.109% MgSO4 (1 M), 2.40% 10 mg/mL DNase 1, and 1.54% 100-μg/mL trypsin inhibitor) was added. The solution was mixed for 2 min, followed by centrifugation at 4000×g for 5 min at room temperature. The HBSS was then aspirated and the pellet was re-suspended in 6 mL of solution C (89.5% HBSS, 0.215% MgSO4 (1 M), 5.82% DNase I, and 4.47% trypsin). The cells were transferred to a 50 mL falcon tube and another 6 mL of solution C was added. The cells were titrated and centrifuged at 4000×g for 5 min and the supernatant aspirated. Neurobasal plating media was prepared with 96% neural basal media, 2% B27 supplement, 0.8% N2 supplement, 0.5% penicillin/streptomycin, 0.25% Glutamax, and 0.1% amphotericin B solution. The resulting pellet from centrifugation was then re-suspended in the prepared neurobasal plating media, and counted with a hemocytometer prior to plating in 35 mm wells coated with 7% poly-L-Ornithine at a density of 0.5 × 106 cell/well. The cells were stored at 37 °C with 5% CO2, and the medium was changed on the third day of plating prior to use.
Neuron Cellular Viability in Presence of Amyloid Beta
Aβ1–42 was prepared as previously described. NH4OH was used as the lyophilization solvent and the lyophilized powder was suspended in DMSO and F12 medium to 150 μM. An Aβ1–42 sample was prepared and incubated for 24 h while a second sample was prepared at the time of use providing the oligomer and monomer conditions, respectively. Three different environmental conditions were provided for each cell population (N = 4) with 10 μL additions of pre-incubated Aβ1–42 (monomer), and postincubation Aβ1–42 (oligomer). One set of cultures were left without any environmental alterations to provide a baseline (control) of the natural decrease in cellular viability over time. The cells were incubated for 6, 24, 36, and 48 h. PI staining was applied through addition of 10 μL of PI 45 min prior to fixation. The cells were fixed with 500 μL of 4% formaldehyde followed by 400 μL of 2% formaldehyde. The fixing agent was removed with three consecutive PBS (1×) washes.
Microscopy
Fine tweezers were used to plate the cells fixed on 12 mm round coverslips. The cells were counter-stained with DAPI for nuclear visualization and imaged using a Nikon Eclipse Ni-E with fluorescent filters and a DS-Qi2 monochrome microscope camera. Of the magnification, 20× was used with appropriate filters for DAPI- and PI-stained cell images. Five images were acquired for each cell culture in order to obtain the average cell deaths vs. total cells per culture. ImageJ software was used to process and analyze the cell images obtained.
Statistical Analysis
All values were presented as the mean ± standard error of the mean (SEM) of four independent experiments (n = 4). Statistical comparisons between experimental groups were performed using the GraphPad Prism software. A two-way ANOVA with Tukey’s HSD test was applied. P < 0.05 was considered to have statistical significance.
Mass Spectrometry
Sinapinic acid (SA) was selected as the MALDI matrix on this work based on preliminary experiments comparing it with the two other most commonly used matrices, alpha-cyano-4-hydroxycinnamic acid and 2,5-dihydroxybenzoic acid. SA matrix was prepared to 10 mg/mL in 50% ACN and 0.05% TFA. The Aβ sample and SA matrix were deposited as sandwiched layers, where 0.75 μL of the Aβ solution was spotted between two layers of SA (0.75 μL). The spots were washed twice with 1 μL water prior to analysis. MALDI-MS sample analyses were performed on a Sciex TOF/TOF 5800 MALDI mass spectrometer. TOF-TOF Series Explorer in positive ion linear mode and Data Explorer were used for data acquisition and processing, respectively (Sciex). Total sum of 200 shots/spot were acquired with a 1-kHz OptiBeam on-axis Nd:YAG laser system. Lowest possible laser intensity was used to minimize dissociation and favor the detection of Aβ oligomers. Other instrument parameters were generally optimized for sensitivity while compromising resolution to an acceptable extent.
Results and Discussion
MALDI MS Results From Wild-Type Aβ Oligomers
We began our studies by performing the detection of wild-type Aβ1–40 and Aβ1–42 oligomers with MALDI MS based on the conditions reported by Van Duyne [54] (Fig. 1). Briefly, samples were subject to monomerization and then oligomerization conditions. SA was the MALDI matrix, and the same spotting was used with a modification of including a washing step. Effects of different TFA concentrations in the matrix solution were assessed, and we concluded that a reduction in TFA concentrations was most beneficial in the detection of oligomers within the sample. This coincides with previous studies indicating low pH disruptions in the formation of non-covalent complexes [55]. The instrument’s acquisition parameters were set to optimize for detection sensitivity. Our MALDI MS instrument appeared to be susceptible to ionization suppression of higher MW species by low MW ones. In other words, the detection of high MW oligomers was hindered by the presence of the monomers, as shown in Fig. 1a, e. To alleviate this, mass spectra were acquired starting at higher m/z values to enhance the sensitivity for the large MW species.
The monomeric Aβ1–40 and Aβ1–42 peptides have a molecular weight of 4329.86 and 4514.10 Da, respectively, and therefore, only the singly charged ions of the Aβ monomer and multimers were observed in all cases. Between the Aβ1–40 and Aβ1–42, our spectra revealed that signals of high MW complexes were more prominent for Aβ1–40 than Aβ1–42. Importantly, when comparing our data to those previously reported [54], the same general trend in oligomer size distribution was detected. That is, the signal intensity was the strongest with small MW species, and dropped off in a decaying fashion for larger complexes. There were also differences in the peak intensities, as expected, attributed to the different MALDI mass spectrometers used. The MALDI MS results also generally agree with those reported by gel electrophoresis, where substantial quantities of multimers relative to the monomer were typically detected, as bands of similar size and darkness. When compared to ESI MS, rather different looking mass spectra were reported with similar samples. The dominant two peaks in the ESI mass spectra of Aβ1–42 correspond to the monomers with − 3 and − 4 charge states, and the sum of peak height from other peaks accounts for less than 10% of the total [50].
MALDI MS Results From Aβ Variants
The preparation of Aβ samples for MALDI MS analysis involve mixing it with UV absorbing matrices at acidic pH, which is then deposited on target plates and allowed to dry. Hence, a common concern is the possibility of artificial non-specific associations that could occur either during sample spot drying or within the mass spectrometer in gas phase. In the literature, numerous examples of MALDI MS application on complexes of biomolecules were reported and reviewed [55,56,57]. The consensus is that the technique is capable of detecting certain non-covalent multimeric complexes under optimized conditions. However, there is not one universally optimal protocol. Therefore, it is important to experimentally determine if the Aβ non-covalent complexes detected by MALDI MS herein were real or merely an artifact. To achieve this, Aβ variants with varying propensities in oligomerization, used by others in toxicity experiments, were acquired and analyzed.
We first selected the Aβ1–40 variant with the same amino acid composition as wild-type, but in a random sequence, as a negative control. This variant, Aβ1–40S, has been applied in Alzheimer’s disease research as an inactive control, and verified to exhibit minimal toxic effects compared to the wild type [58]. Using the same experimental conditions for the wild-type Aβ samples, mass spectra were collected for Aβ1–40S, and the results revealed only a minimal level of dimerization (Fig. 2). Importantly, the results presented a very strong evidence that gas phase aggregates and non-specific association of the dried Aβ samples did not occur, at least not to a significant extent. Consequently, it argues that the multimeric signals observed by MALDI MS, such as those in Fig. 1, in fact came from Aβ complexes assembled in solution.
Another negative or inactive control of Aβ used in Alzheimer’s disease research is the reversed sequence variant, Aβ42–1. Contrary to our expectation, oligomerization was evident with the reversed peptide, and the oligomeric composition observed from Aβ42–1 (Fig. 3) was very similar to that of wild-type Aβ1–42 (Fig. 1e–h). However, controversy on the effectiveness of this variant as an inactive control has been reported. For example, Vadukul et al. presented experimental data that the reversed Aβ peptides self-assembled to form fibers within 24 h, even though they exhibited a reduced effect on cellular health compared to wild-type Aβ [59].
Finally, we completed this set of experiments by examining a third Aβ variant, Aβ1–40(E22Q). This Aβ mutant was intended to aggregate more readily in comparison to the wild-type peptide [60,61,62,63]. To capture the more favorable oligomerization of Aβ1–40(E22Q), we performed MALDI MS of the Aβ samples without the 24-h incubation step. It essentially allowed us to capture the onset of oligomerization, immediately after the monomerized Aβ samples were put in oligomerizing conditions. Figure 4 presents the mass spectra, comparing the Aβ1–40(E22Q) with wild-type Aβ1–40. The results between Fig. 4b, d indicate a higher level of multimeric signals from the mutant, in agreement with the expected behavior of the mutant.
In Vitro Aβ Toxicity Assay
Another noteworthy point from the results in Fig. 4 is the ability of our technique in detecting differences in the Aβ multimeric compositions before and after the incubation/oligomerization step, namely, the differences observed between Figs. 1a, b with Fig. 4c, d for Aβ1–40. Very similar results were also observed for Aβ1–42 (data not shown). To verify that the incubation step indeed resulted in the intended oligomerization of Aβ peptides, we conducted an in vitro toxicity assay on embryonic rat cortical neuron cell cultures. The average cell death percentage was determined in 48 h under the treatment of using our Aβ samples with and without the incubation step, which we refer to as the “oligomerized” and “monomerized” Aβ samples (Fig. 5). The results obtained from the monomer treatment were indistinguishable from the control in all time points measured. In contrast, an accelerated rate of cell death was observed upon treatment with Aβ oligomers. At 24 h, the toxicity of the oligomer sample treatment began to display a notable difference when compared to the monomer sample (P = 0.07). As the treatment was extended for 36 h, the toxicity of the oligomer treatment was significantly higher than that of the control (P = 0.002). Once the treatment was carried out for 48 h, statistically significant differences in toxicity between the oligomeric sample and that of the control and monomeric samples were observed (p = 0.03 and 0.01, respectively). In the literature, reports on the effect of Aβ oligomers varied depending on conditions such as cell culture preparation methods, stains, and dosage. For example, one reported a decrease in cellular viability from 90 to 55% upon exposure to Aβ oligomers while another reported 20% cellular viability after 48 h [64, 65]. Importantly, our results reaffirmed that the significant toxicity of the oligomerized Aβ samples are in close agreement with the MALDI MS peak distribution observed.
Manipulation of Aβ Oligomeric Composition With MWCO Filters
Further to examining the various Aβ variants, we performed sample filtration using MWCO filters with the intention of removing the higher MW complexes at two different MWCO points, 10 and 30 kDa. Based on the discoveries presented, MALDI MS should be able to detect differences in oligomeric composition after being manipulated by MWCO filtration. Specifically, a 10-kDa cutoff filter should in theory remove complexes larger than dimers (8659.72 Da). The resulting mass spectrum indeed revealed the expected reduction in signals of the large oligomers. The result is presented in Fig. 6a, where a significant reduction the dimer signal intensity was observed. In comparison, when the Aβ1–40 oligomers were filtered at the 30-kDa cutoff point, significantly stronger dimer and trimer signals were observed (Fig. 6b). The extent of sample loss due to non-specific adsorption during the MWCO filtration was determined by NanoDrop spectrophotometer, which measured the filtrate concentration to be approximately three times lower than stock concentrations. For comparison, the mass spectrum from a threefold diluted Aβ sample, without MWCO filtration, is shown in Fig. 6c. The results collectively allowed us to draw the conclusion that, despite the harsh, non-native, nature of MALDI MS, it is capable of revealing the oligomeric composition of Aβ complexes in solution. The Aβ complexes detected by MALDI agreed with expected oligomeric compositions of the solution samples. Finally, the intensity of the MALDI MS signals of these oligomers corresponded to their concentration at least in a semi-quantitative fashion. It is however noteworthy that the detection of very large Aβ oligomers, if present, is limited by the sensitivity of the MS.
Conclusion
In this paper, the validity of MALDI MS in the detection of Aβ monomeric/oligomeric composition was investigated. Our results verified the ability of MALDI MS to differentiate variants of Aβ peptides with different propensities of oligomerization, and the Aβ samples obtained before and after oligomerization incubation. In contrary to previous speculations, our work provided the evidence that the MALDI MS signals of Aβ oligomers did not result from random gas phase aggregation. Interestingly, we observed a significant extent of oligomerization from the reversed peptide, Aβ42–1, which supported the controversial report of reversed Aβ self-assembly reported in the literature. Even though MALDI MS is not a quantitative measurement of the Aβ oligomeric composition, the peak distribution broadly reflects the oligomeric composition in a qualitative manner. In terms of potential applications, MALDI MS will allow researchers to confirm the multimeric composition of their Aβ samples prior to their use in neurodegeneration research, or to determine the oligomerization affinity of novel Aβ mutants. The detection of Aβ oligomers with MALDI MS also presents an exciting opportunity of future work in the direct MS imaging of multimeric Aβ in brain tissues, although further research and development will be required to overcome background interferences and signal suppression.
Abbreviations
- AD:
-
Alzheimer’s disease
- AFM:
-
atomic force microscopy
- Aβ:
-
amyloid beta
- DMSO:
-
dimethyl sulfoxide
- ESI:
-
electrospray ionization
- F12:
-
Ham’s F12 media
- IMS:
-
ion mobility spectrometry
- MALDI:
-
matrix-assisted laser desorption/ionization
- MS:
-
mass spectrometry
- MWCO:
-
molecular weight cutoff
- NH4OH:
-
ammonium hydroxide
- SA:
-
sinapinic acid
- SPR:
-
surface plasmon resonance
- TFA:
-
trifluoroacetic acid
- TOF:
-
time of flight
- DAPI:
-
4′-6-diamidino-2-phenylindole
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Acknowledgments
The authors thank Mrs. Lynn Wang for her help with cell culture preparations. The authors also acknowledge Mrs. Kristina Jurcic, the University of Western Ontario MALDI MS Facility, and the Schulich School of Medicine and Dentistry for their support.
Funding
This work was funded by the University of Western Ontario, Natural Sciences and Engineering Research Council of Canada, Canadian Institutes for Health Research, Lawson Health and Research Institutes, and the Canada Foundation for Innovation.
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Wang, J.SH., Whitehead, S.N. & Yeung, K.KC. Detection of Amyloid Beta (Aβ) Oligomeric Composition Using Matrix-Assisted Laser Desorption Ionization Mass Spectrometry (MALDI MS). J. Am. Soc. Mass Spectrom. 29, 786–795 (2018). https://doi.org/10.1007/s13361-018-1896-z
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DOI: https://doi.org/10.1007/s13361-018-1896-z