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Pramana

, Volume 71, Issue 2, pp 275–282 | Cite as

Adaptation dynamics of the quasispecies model

  • Kavita JainEmail author
Article
  • 31 Downloads

Abstract

We study the adaptation dynamics of an initially maladapted population evolving via the elementary processes of mutation and selection. The evolution occurs on rugged fitness landscapes which are defined on the multi-dimensional genotypic space and have many local peaks separated by low fitness valleys. We mainly focus on the Eigen’s model that describes the deterministic dynamics of an infinite number of self-replicating molecules. In the stationary state, for small mutation rates such a population forms a quasispecies which consists of the fittest genotype and its closely related mutants. The quasispecies dynamics on rugged fitness landscape follow a punctuated (or steplike) pattern in which a population jumps from a low fitness peak to a higher one, stays there for a considerable time before shifting the peak again and eventually reaches the global maximum of the fitness landscape. We calculate exactly several properties of this dynamical process within a simplified version of the quasispecies model.

Keywords

Evolution dynamics quasispecies 

PACS Nos

87.23.Kg 02.50.-r 05.10.Gg 

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Copyright information

© Indian Academy of Sciences 2008

Authors and Affiliations

  1. 1.Theoretical Sciences UnitJawaharlal Nehru Centre for Advanced Scientific ResearchBangaloreIndia
  2. 2.Evolutionary and Organismal Biology UnitJawaharlal Nehru Centre for Advanced Scientific ResearchBangaloreIndia

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