Abstract
Oversprouting is a poorly studied disease of guarana plant (Paullinia cupana var. sorbilis), a native species from Amazon Rainforest caused by Fusarium decemcellulare (FDC) that affects the plant growth and reproduction, severely compromising productivity. The sorbilis variety of guarana is anciently cultivated and is used today for the industry of soft drinks, cosmetic and pharmaceutical. Transcriptome, proteome, light and electron microscopy were used to compare symptomatic and asymptomatic tissues and reveal anatomical, histological and cytological alterations resultant from the disease. Disease symptoms described here include a marked reduction in the longitudinal axis and the formation of “capsules”, named as this for the first time here, which display hard thickened external walls and contain extremely malformed floral organs and/or poorly differentiated vegetative primordia when occurring isolate in individual branching points. The aggregate of multiple “capsules” in a same branch point produces galls. The production of indol-acetic acid (IAA) in vitro by F. decemcellulare was for the first time reported and the comparative transcriptome and preliminary proteome data from symptomatic and asymptomatic tissues, support the occurrence of hormonal imbalance identified through several plant hormone-related genes and proteins differentially expressed only in symptomatic tissues. Auxin signaling mechanism, as well as auxin-responsive genes associated to cell cycling, division and proliferation also occurred differentially in infected tissues. Oversprouting and the reduction of the longitudinal axis in malformed cells and organs are related to hormonal unbalance are discussed in this paper.
Similar content being viewed by others
References
Acosta IF, Gasperini D, Chételat A, Stolz S, Santuari L, Farmer EE (2013) Role of NINJA in root jasmonate signaling. Proc Natl Acad Sci 110(38):15473–15478
Andrews S (2010) FastQC: a quality control tool for high throughput sequence data. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/. 19 Jun. 2018
Ângulo SM, Villapudua JR (1982) Buba of mango (Mangifera indica L.) in the state of Sinaloa, México: abstract the American Phytopathological society. Phytopathology 72:171
Araújo JCA, Pereira JCR, Gasparotto L, Arruda MR (2006) O complexo superbrotamento do guaranazeiro e seu controle. Comunicado Técnico, 45. Embrapa Amazônia Ocidental, Manaus, p 4
Atroch AL (2002) Aspectos gerais da cultura do guaraná. Foods Food Ingredients Journal Of Japan, Osaka, v. 204, p. 53–59
Bailey S, Percy DM, Hefer CA, Cronk QC (2015) The transcriptional landscape of insect galls: psyllid (Hemiptera) gall formation in Hawaiian Metrosideros polymorpha (Myrtaceae). BMC Genomics 16(1):943
Bastos CN, Santos AO (2001) Superbrotamento de inflorescências do Limão-de-Caiena causado por Fusarium decemcellulare. Fitopatol Bras 26:222
Batista MF, Bolkan HA (1982) Superbrotamento do guaranazeiro. Fitopatologia Brasileira 7:315–317
Bennett T, Hines G, Rongen MV et al (2016) Connective auxin transport in the shoot facilitates communication between shoot apices. PLoS Biol 14:e1002446
Bolger AM, Lohse M, Usadel B (2014) Trimmomatic: A flexible trimmer for Illumina sequence data. Bioinformatics, btu170
Brown NA, Urban M, Van De Meene AML, Hammond-Kosack KE (2010) The infection biology of Fusarium graminearum: defining the pathways of spikelet to spikelet colonisation in wheat ears. Fungal Biol 114:555–571
Canet JV, Dobón A, Tornero P (2012) Non-recognition-of-BTH4, an Arabidopsis mediator subunit homolog, is necessary for development and response to salicylic acid. Plant Cell 24(10):4220–4235
Carrari F, Fernie AR, Iusem ND (2004) Heard it through the grapevine? ABA and sugar cross-talk: the ASR story. Trends Plant Sci 9(2):57–59
Chen Q, Liu Y, Maere S et al (2015) A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development. Nat Commun 6:8821
Chiwocha SD, Abrams SR, Ambrose SJ et al (2003) A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: an analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds. Plant J 35:405–417
Chung KR, Shilts T, Ertürk U et al (2003) Indole derivatives produced by the fungus Colletotrichum acutatum causing lime anthracnose and postbloom fruit drop of citrus. FEMS Microbiol Lett 226:23–30
CONAB (2016) Guaraná - Período: 01 a 31/01/2016. http://wwwconabgovbr/OlalaCMS/uploads/arquivos/16_02_10_16_32_06_guaranajaneiro2016pdf/ Cited 20 Mar 2016
Conesa AS, Götz JM, García-Gómez J, Terol J, Talón M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 18:3674–3676
Dominguez PG, Carrari F (2015) ASR1 transcription factor and its role in metabolism. Plant Signal Behav 10:e992751. https://doi.org/10.4161/15592324.2014.992751
Duke JA, Bogenschutz-Godwin MJ, duCellier J, Duke PAK (2002) Handbook of medicinal herbs, 2nd edn. CRC Press, Boca Raton, p 896pp
Farr D.F., & Rossman AY Fungal Databases, U.S. National Fungus Collections, ARS, USDA. Retrieved September 2, 2019, from https://nt.ars-grin.gov/fungaldatabases/
Freitas DV, Carvalho CR, Filho FJN, Astolfi-Filho S (2007) Karyotype with 210 chromosomes in guarana (Paullinia cupana‘Sorbilis’). J Plant Res 120:399–404
Gee MA, Hageni G, Guilfoyle TJ (1991) Tissue-specific and organ-specific expression of soybean Auxin-responsive transcripts GH3 and SAURs. Plant Cell 3:419–430
Gheysen G, Mitchum MG (2019) Phytoparasitic nematode control of plant hormone pathways. Plant Physiol 179(4):1212–1226
González-Lamothe R, Oirdi ME, Brisson N, Bouarab K (2012) The conjugated Auxin Indole-3-acetic acid–aspartic acid promotes plant disease development. Plant Cell 24:762–777
Grabherr MG, Haas BJ, Yassour M et al (2011) Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data. Nat Biotechnol 29:644–652
Guimarães ALA, Neufeld PM, Santiago-Fernandes LDR, Vieira ACM (2015) Structure and development of ‘witches’ broom’ galls in reproductive organs of Byrsonima sericea (Malpighiaceae) and their effects on host plants. Plant Biol 17:493–504
Hamerski L, Somner GV, Tamaio N (2013) Paullinia cupana Kunth (Sapindaceae): A review of its ethnopharmacology, phytochemistry and pharmacology. J Med Plants Res 7:2221–2229
Hanna SL, Sherman NE, Kinter MT, Goldberg JB (2000) Comparison of proteins expressed by Pseudomonas aeruginosa strains representing initial and chronic isolates from a cystic fibrosis patient: an analysis by 2-D gel electrophoresis and capillary column liquid chromatography–tandem mass spectrometry. Microbiology 146(10):2495–2508
Heckman MA, Weil J, Mejia GJ (2010) Caffeine (1, 3, 7-trimethylxanthine) in foods: A comprehensive review on consumption, functionality, safety, and regulatory matters. J Food Sci 75:77–87
Huang DW, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4:44–57
Karnovsky MJ (1965) A formaldehyde-glutaraldehyde fixative of high osmolarityfor use in eléctron microscopy. J Cell Biol 27:137A
Kaur A, Kaur N (2018) Mango malformation: A fungal disease, physiological disorder or malady of stress. J Appl Nat Sci 10(1):403–409
Kim D, Pertea G, Trapnell C et al (2013) TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 14:R36
Koo AJ, Howe GA (2009) The wound hormone jasmonate. Phytochemistry 70(13–14):1571–1580
Kopylova E, Noé L, Touzet H (2012) SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data. Bioinformatics 28(24):3211–3217
Kulkarni GB, Sanjeevkumar S, Kirankumar B, Santoshkumar M, Karegoudar TB (2013) Indole-3-acetic acid biosynthesis in Fusarium delphinoides strain GPK, a causal agent of wilt in chickpea. Appl Biochem Biotechnol 169:1292–1305
Kuri CMB (2008) The Guaraná industry in Brazil. Int Bus Econ Res J 7:87–98
Kuzmanović N, Smalla K, Gronow S, Puławska J (2018) Rhizobium tumorigenes sp. nov., a novel plant tumorigenic bacterium isolated from cane gall tumors on thornless blackberry. Sci Rep 8(1):9051
Lan M, Li G, Hu J, Yang H, Zhang L, Xu X et al (2019) iTRAQ-based quantitative analysis reveals proteomic changes in Chinese cabbage (Brassica rapa L.) in response to Plasmodiophora brassicae infection. Sci Rep 9(1):1–13
Lawrence JS, Câmpelo AMFL, Figueiredo JM (1991) Enfermidades do cacaueiro: II. Doenças fúngicas que ocorrem nas folhas, ramos e tronco. Agrotrópica 3:1–14
Le Floch G, Rey P, Benizri E et al (2003) Impact of auxin-compounds produced by the antagonistic fungus Pythium oligandrum or the minor pathogen Pythium group F on plant growth. Plant Soil 257:459–470
Lee CW, Efetova M, Engelmann JC, Kramell R, Wasternack C, Ludwig-Müller J, Hedrich R, Deeken R (2009) Agrobacterium tumefaciens promotes tumor induction by modulating pathogen defense in Arabidopsis thaliana. Plant Cell 21:2948–2962
Leslie JF, Summerell BA (2006) The Fusarium laboratory manual. Blackwell, Malden, p 387
Li X, Yang DL, Sun L et al (2016) The systemic acquired resistance regulator OsNPR1 attenuates growth by repressing Auxin signaling through promoting IAA-Amido synthase expression. Plant Physiol 172:546–558
Liu F, Wu JB, Zhan RL, Ou XC (2016) Transcription profiling analysis of mango–Fusarium mangiferae interaction. Front Microbiol 7:1443
Liu K, Li H, Li W, Zhong J, Chen Y, Shen C, Yuan C (2017) Comparative transcriptomic analyses of normal and malformed flowers in sugar apple (Annona squamosa L.) to identify the differential expressed genes between normal and malformed flowers. BMC Plant Biol 17(1):170
Majhenic L, Skerget M, Knez Z (2007) Antioxidant and antimicrobial activity of guarana seed extracts. Food Chem 104:1258–1268
Maor R, Haskin S, Levi-Kedmi H, Sharon A (2004) In Planta production of Indole-3-acetic acid by Colletotrichum gloeosporioides f. sp. aeschynomene. Appl Envron Microbiol 70:1852–1854
Matos KS, Almeida LB, Hanada RE et al (2016) Inflorescence oversprouting and vascular and rachis necrosis caused by Fusarium decemcellulare in Anacardium occidentale in Brazil. Plant Dis 100:1781
Matsuda F, Miyazawa H, Wakasa K, Miyagawa H (2005) Quantification of indole-3-acetic acid and amino acid coniugates in rice by liquid chromatography-electrospray ionization-tandem mass spectrometry. Biosci Biotechnol Biochem 69:778–783
Morante-Carriel J, Sellés-Marchart S, Martínez-Márquez A, Martínez-Esteso MJ, Luque I, Bru-Martínez R (2014) RNA isolation from loquat and other recalcitrant woody plants with high quality and yield. Anal Biochem 452:46–53
Nascimento Filho FJ, Atroch AL (2002) Guaranazeiro. In: Brukner CH (ed) Melhoramento de fruteiras tropicais. UFV, MG, Viçosa, pp 291–307
Niehaus EM, Münsterkötter M, Proctor RH, Brown DW, Sharon A, Idan Y, Tarkowská D (2016) Comparative “omics” of the Fusarium fujikuroi species complex highlights differences in genetic potential and metabolite synthesis. Genome Biol Evolution 8(11):3574–3599
O’Brien TP, Feder N, Mccully ME (1964) Polychromatic staining of plant cell walls by toluidine blue. Protoplasma 59:368–373
Ortiz E, Cruz M, Melgarejo L M, Marquínez X, Hoyos-Carvajal L (2014) Histopathological features of infections caused by Fusarium oxysporum and F. solani in purple passionfruit plants (Passiflora edulis Sims). Summa Phytopathologica 40(2):134–140
Palni LMS, Burch L, Horgan R (1988) The effect of auxin concentration on cytokinin stability and metabolism. Planta 174(2):231–234
Perrot-Rechenmann C (2010) Cellular responses to Auxin: division versus expansion. Cold Spring Harb Perspect Biol 2:a001446
Petrásek J, Elckner M, Morris DA, Zazímalova E (2002) Auxin efflux carrier activity and auxin accumulation regulate cell division and polarity in tobacco cells. Planta 216:302–308
Ploetz R, Vazquez A, Benscher D (1996) First report of Fusarium decemcellulare as a pathogen of mango in the United States. Plant Dis 80:1207
Rakusová H, Abbas M, Han H, Song S, Robert HS, Friml J (2016) Termination of shoot Gravitropic responses by Auxin feedback on PIN3 polarity. Curr Biol 26:3026–3032
Schimpl F, Silva J, Goncalves J, Mazzafera P (2013) Guarana: revisiting a highly caffeinated plant from the Amazon. J Ethnopharmacol 150:14–31
Simonini S, Benciveng S, Trick M, Østergaard L (2017) Auxininduced modulation of ETTIN activity orchestrates gene expression in Arabidopsis. Plant Cell 29:1864–1882
Souza AL, Angelo PCS, Nogueira PPO, Gonçalves JFC, Franco AM, Astolfi-Filho S et al (2014) Method for obtaining high-resolution proteomic analysis from pericarps of guarana.Genetics and. Mol Res 13(3):8014–8024
Summerell BA, Salleh B, Leslie JF (2003) A utilitarian approach to Fusarium identification. Plant Dis 87:117–128
Suzuki H, Yokokura J, Ito T, Arai R, Yokoyama C, Toshima H, Nagata S, Asami T, Suzuki Y (2014) Biosynthetic pathway of the phytohormone auxin in insects and screening of its inhibitors. Insect Biochem Mol Biol 53:66–72
Takase T, Nakazawa M, Ishikawa A et al (2004) ydk1-D, an auxin-responsive GH3 mutant that is involved in hypocotyl and root elongation. Plant J 37:471–483
Teixeira PJ, Thomazella DP, Reis O, do Prado PF, do Rio MC, Fiorin GL, José J, Costa GG, Negri VA, Mondego JM, Mieczkowski P, Pereira GA (2014) High-resolution transcript profiling of the atypical biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa. Plant Cell 26(11):4245–4269
Trapnell C, Williams BA, Pertea G et al (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol 28:511–515
Tsavkelova E, Oeser B, Oren-Young L et al (2012) Identification and functional characterization of indole-3-acetamide-mediated IAA biosynthesis in plant-associated Fusarium species. Fungal Genet Biol 49:48–57
Turecková V, Novák O, Strnad M (2009) Profiling ABA metabolites in Nicotiana tabacum L. leaves by ultra-performance liquid chromatography electrospray tandem mass spectrometry. Talanta 80:390–399
Vicente LP, de la Parte EM, Pérez TC (2012) First report in Cuba of green point gall of cocoa cushion caused by Albonectria rigidiuscula (Fusarium decemcellulare). Fitosanidad 16:19–25
Vrabka J, Niehaus E, Münsterkötter M, Proctor RH, Brown DW, Novák O et al (2018) Production and role of hormones during interaction of Fusarium species with maize (Zea mays L.) seedlings. Frontiers Plant Sci 9:1936
Yin C, Park JJ, Gang DR, Hulbert SH (2014) Characterization of a tryptophan 2-Monooxygenase gene from Puccinia graminis f. sp. tritici involved in auxin biosynthesis and rust pathogenicity. Mol Plant-Microbe Interactions J 27:227–235
Acknowledgments
The authors thank Sérgio de Araújo Silva of the Plant Physiology Laboratory for their technical support. We acknowledge to Dr. Adriana Franco Paes Leme and Dr. Bianca Alves Pauletti from Brazilian Biosciences Laboratory (LNBio), CNPEM, Campinas, Brazil (Mass Spectrometry Laboratory), for the infrastructure provided and technical support; to collegeagues at colleagues at Embrapa Dr. Firmino José do Nascimento Filho, for his help in collecting plant material, to Karina Bichara for the photos provided, to Jeferson Chagas for the technical and laboratory support. Special thanks to Dr. Paula Cristina da Silva Ângelo for her help in the anatomical studies, dissection of reproductive and vegetative structures and collaborations in the writing of this paper. The first author thanks CAPES for the scholarship. The research was supported by the Amazonas State Research Foundation (FAPEAM), National Council for Scientific and Technological Development (CNPq) and this study was financed also in part by the Coordenação deAperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) -Finance Code 001 (88887.200468/2018-00) - PROCAD-Amazônia.
Author information
Authors and Affiliations
Corresponding author
Additional information
Communicated by: Desiree M. Hautea
Publisher’s Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Electronic supplementary material
Fig S1
Vegetative buds in asymptomatic branches and branches with symptoms of oversprouting in guarana plants. A: asymptomatic axillary vegetative bud in differentiation, with the longitudinal axis longer than the transversal. B: symptomatic vegetative bud, showing shortening of the longitudinal axis and increase of the transversal axis, with bracts organised concentrically on the same longitudinal plane. C: cross section of a branching point in an asymptomatic plant with very young secondary branch (Acosta et al. 2013) and axillary buds protected by foliaceous bracts (Andrews 2010). D: cross section of a “capsule” excised from a symptomatic branch. Malformed meristems or meristematic cores are encapsulated by the very thick outer layer (yellow circle). E: transection of a symptomatic branching point exactly in the plane of connection of a “capsule”. At least two meristematic cores can be supposed to exist inside the “capsule” delimited by a thick outer layer, and one of those (Acosta et al. 2013) could probably differentiate in a secondary branch in an asymptomatic node. F and I: longitudinal sections of “capsules” from symptomatic branches. In I the deeper staining with toluidine blue indicates what would be rows of small new formed or meristematic cells, composing at least three active cores inside the same “capsule” delimited by extremely thick wall (red arrows), which is composed by a set of imbricated thickened pieces that would be malformed bracts. G: asymptomatic young branch, in cross section. H: young branch in symptomatic plant, with thickening of the cortex. J-K: apical portions of guarana plant branches. The white bars indicate the planes of the transversal sections to show the internal structures in the details on the right side of the figure. Asterisks indicate the surfaces of the main branches. J: asymptomatic guarana plant presenting secondary branches originated from differentiation and elongation of axillary buds in four nodes and the initial signs of differentiation in the most apical bud. K: symptomatic guarana plant, displaying “capsules” in five branching nodes replacing secondary branches that should have differentiated and reduced internodes. (Scale bars A-H = 2 mm, J and K = main Fig. 1 cm and details 5 mm; I = 800 μm). (PNG 2634 kb)
Fig. S2
Galls in the main branch of adult guarana plants show proliferation of “capsules” from vegetative buds (A-D). E-H: “Capsules” bunch in the branching node of nursery young plant, during the initial formation of galls. E: at least nine “capsules” can be counted on one branching point. F: longitudinal section of the structure in E, showing approximately five “capsules” and a basal connector tissue (BC), which makes the connection between the “capsules” themselves and to the plant branch, forming the gall. G: less affected branch of a nursery young plant with at least four “capsules” juxtaposed consecutively and not side by side. H: longitudinal section of the structure in G showing the basal connector tissue. I-L: Oversprouting symptoms in nursery young plant branch. I: “capsule” seen externally, red line indicates the plane of the cross section shown in K. The proliferation of trichomes in the outer surface of the “capsule”, a characteristic of protection bracts overexpressed in symptomatic tissues, is easily perceived. J: the same “capsule”, as in I viewed from above to show the thickness of the surrounding outer layer and the presence of poorly differentiated and malformed organs inside L: histological cut of the same “capsule”, stained with toluidine blue. (*) Air-space inside the “capsule”. Red arrows indicate the outer layer of the “capsules”, which are likely to be extremely thickened bracts. Circles indicate possible independent and malformed meristems. (Scale bars B and D = 5 mm; E-K = 5 mm; L = 800 μm). (PNG 3216 kb)
Fig. S3
GO terms (top 50) associated to differentially expressed genes (Cellular Component). (PNG 25 kb)
Fig. S4
GO terms (top 50) associated to differentially expressed genes (Biological Process). (PNG 24 kb)
Fig. S5
GO terms (top 50) associated to differentially expressed genes (Molecular Function). (PNG 19 kb)
Fig. S6
Detection of Indole-3-Acetic Acid (IAA) by UPLC- QTOF-MSE. A) Chromatogram in negative-ion mode Full Scan (m/z 120–1180 Da). B) Extracted ion (m/z 174.05). The retention times of the compound are: (A) 5.29 min for analytical standard (IAA from plant origin) and 5.34 min for Fusarium decemcellulare (CML 3423). (B) 5.30 min for analytical standard and F. decemcellulare (CML 3423). (PNG 584 kb)
Fig. S7
Mass spectra data for the molecule of Indole-3-Acetic Acid (IAA) precursor (m/z 174.05) and product (m/z 130) for analytical standard, from plant origin, and Fusarium decemcellulare CML 3423) analysed in the negative-ion mode. (PNG 724 kb)
Fig. S8
Guarana plant oversprouting complex. A- Hyperplasia and hypertrophy of inflorescences; B- Hyperplasia and hypertrophy of the vegetative bud; C – Galls of “capsules” from reproductive tissue (galls with flower aspect); D - Galls of “capsules” from vegetative buds. (JPG 1855 kb)
ESM 1
(XLSX 8 kb)
ESM 2
(XLSX 20 kb)
ESM 3
(XLSX 17 kb)
Rights and permissions
About this article
Cite this article
de Queiroz, C.A., da Silva Matos, K., Lobo, I.K.C. et al. Morpho-Anatomical and Molecular Characterization of the Oversprouting Symptoms Caused by Fusarium decemcellulare in Guarana Plants (Paullinia cupana var. sorbilis). Tropical Plant Biol. 13, 274–286 (2020). https://doi.org/10.1007/s12042-020-09256-1
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12042-020-09256-1