Skip to main content
Log in

Development and diversity of a novel panel of short tandem repeat markers encompassing the SCN5A gene in Iranian population

  • Online Resources
  • Published:
Journal of Genetics Aims and scope Submit manuscript

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1

References

  • Benson D. W., Wang D. W., Dyment M., Knilans T. K., Fish F. A., Strieper M. J. et al. 2003 Congenital sick sinus syndrome caused by recessive mutations in the cardiac sodium channel gene (SCN5A). J. Clin. Invest. 112, 1019–1028.

    Article  CAS  Google Scholar 

  • Butler J. M. 2007 Short tandem repeat typing technologies used in human identity testing. BioTechniques 43, Sii–Sv.

  • Chen Q., Kirsch G. E., Zhang D., Brugada R., Brugada J., Brugada P. et al. 1998 Genetic basis and molecular mechanism for idiopathic ventricular fibrillation. Nature 392, 293–296.

    Article  CAS  Google Scholar 

  • Darbar D., Kannankeril P. J., Donahue B. S., Kucera G., Stubblefield T., Haines J. L. et al. 2008. Cardiac sodium channel variants associated with atrial bibrillation. Circulation 117, 1927.

    Article  CAS  Google Scholar 

  • Benson G. 1999 Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27, 573–580.

    Article  CAS  Google Scholar 

  • Haas J., Frese K. S., Peil B., Kloos W., Keller A., Nietsch R. et al. 2014 Atlas of the clinical genetics of human dilated cardiomyopathy. Eur. Heart J. 36, 1123.

    Article  Google Scholar 

  • Hamosh A., Scott A. F., Amberger J. S., Bocchini C. A. and McKusick V. A. 2005 Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res. 33, D514–D517.

    Article  CAS  Google Scholar 

  • Hertz C. L., Christiansen S. L., Ferrero-Miliani L., Fordyce S. L., Dahl M., Holst A. G. et al. 2015. Next-generation sequencing of 34 genes in sudden unexplained death victims in forensics and in patients with channelopathic cardiac diseases. Int. J. Legal Med. 129, 793–800.

    Article  CAS  Google Scholar 

  • Kauferstein S., Kiehne N., Peigneur S., Tytgat J. and Bratzke H. 2013 Cardiac channelopathy causing sudden death as revealed by molecular autopsy. Int. J. Legal Med. 127, 145–151.

    Article  Google Scholar 

  • Landrum M. J., Lee J. M., Benson M., Brown G., Chao C., Chitipiralla S. et al. 2016 ClinVar: public archive of interpretations of clinically relevant variants. Nucleic Acids Res. 44, D862–D868.

    Article  CAS  Google Scholar 

  • Legendre M., Pochet N., Pak T. and Verstrepen K. J. 2007 Sequence-based estimation of minisatellite and microsatellite repeat variability. Genome Res. 17, 1787–1796.

    Article  CAS  Google Scholar 

  • Miller S. A., Dykes D. D. and Polesky H. F. 1988 A simple salting out procedure forextracting DNA from human nucleated cells. Nucleic Acids Res. 16, 1215.

    Article  CAS  Google Scholar 

  • Reed G. J., Boczek N. J., Etheridge S. P. and Ackerman M. J. 2015 CALM3 mutation associated with long QT syndrome. Heart Rhythm 12, 419–422.

    Article  Google Scholar 

  • Rabbani B., Khanahmad H., Bagheri R., Mahdieh N. and Zeinali S. 2008 Characterization of minor bands of STR amplification reaction of FVIII gene by PCR cloning. Clin. Chim. Acta. 394, 114–115.

    Article  CAS  Google Scholar 

  • Sieira J., Dendramis G. and Brugada P. 2016 Pathogenesis and management of Brugada syndrome. Nat. Rev. Cardiol. 13, 744–756.

    Article  CAS  Google Scholar 

  • Tester D. J. and Ackerman M. J. 2014 Genetics of long QT syndrome. Method. DeBakey Cardiovasc. J. 10, 29–33.

    Article  Google Scholar 

  • Tester D. J., Medeiros-Domingo A., Will M. L., Haglund C. M., and Ackerman M. J. 2012 Cardiac channel molecular autopsy: insights from 173 consecutive cases of autopsy-negative sudden unexplained death referred for postmortem genetic testing. Mayo Clin. Proc. 87, 524–539.

    Article  CAS  Google Scholar 

  • Zaklyazminskayaa E. and Dzemeshkevicha S. 2016 The role of mutations in the SCN5A gene in cardiomyopathies. Biochim. Biophys. Acta 1863, 1799–1805.

    Article  Google Scholar 

  • Zupanič Pajnič I., Gornjak Pogorelc B. and Balažic J. 2010 Molecular genetic identification of skeletal remains from the Second World War Konfin I mass grave in Slovenia. Int. J. Legal Med. 124, 307–317.

    Article  Google Scholar 

Download references

Acknowledgements

This research was supported by Pasteur Institute of Iran (grant no. 824).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sirus Zeinali.

Additional information

Corresponding editor: S. Ganesh

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Zafari, Z., Amirian, A., Nejad, F.R. et al. Development and diversity of a novel panel of short tandem repeat markers encompassing the SCN5A gene in Iranian population. J Genet 97 (Suppl 1), 49–52 (2018). https://doi.org/10.1007/s12041-018-0902-3

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12041-018-0902-3

Keywords

Navigation