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Medical & Biological Engineering & Computing

, Volume 56, Issue 12, pp 2245–2258 | Cite as

Classification of pressure ulcer tissues with 3D convolutional neural network

  • Begoña García-Zapirain
  • Mohammed Elmogy
  • Ayman El-Baz
  • Adel S. Elmaghraby
Original Article
  • 121 Downloads

Abstract

A 3D convolution neural network (CNN) of deep learning architecture is supplied with essential visual features to accurately classify and segment granulation, necrotic eschar, and slough tissues in pressure ulcer color images. After finding a region of interest (ROI), the features are extracted from both the original and convolved with a pre-selected Gaussian kernel 3D HSI images, combined with first-order models of current and prior visual appearance. The models approximate empirical marginal probability distributions of voxel-wise signals with linear combinations of discrete Gaussians (LCDG). The framework was trained and tested on 193 color pressure ulcer images. The classification accuracy and robustness were evaluated using the Dice similarity coefficient (DSC), the percentage area distance (PAD), and the area under the ROC curve (AUC). The obtained preliminary DSC of 92%, PAD of 13%, and AUC of 95% are promising.

Graphical Abstract

The Classification of Pressure Ulcer Tissues Based on 3D Convolutional Neural Network.

Keywords

Pressure ulcer 3D convolution neural network (CNN) Tissue classification Linear combinations of discrete Gaussians (LCDG) 

Notes

Acknowledgements

The authors thank Prof. Dr. Georgy Gimel’farb, Department of Computer Science, University of Auckland, Auckland, New Zealand, for his help in revising the paper. In addition, the authors want to thank Sofia Zahia, Connor Burns, and Daniel Sierra-Sosa for their support in summarizing the related work and preparing the masks for the GT images.

Funding information

The grants that have contributed with partial funding of the study are IT − 905 − 16 to eVIDA research group from the Basque Government, JC2015 − 00305 Josè Castillejo Research Stay Grant from the Spanish Ministry, and ACM2017_09 from the University of Deusto.

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Copyright information

© International Federation for Medical and Biological Engineering 2018

Authors and Affiliations

  • Begoña García-Zapirain
    • 1
  • Mohammed Elmogy
    • 2
    • 3
  • Ayman El-Baz
    • 3
  • Adel S. Elmaghraby
    • 4
  1. 1.Facultad IngenieríaUniversidad de DeustoBilbaoSpain
  2. 2.Information Technology Department, Faculty of Computers and InformationMansoura UniversityMansouraEgypt
  3. 3.Bioengineering DepartmentUniversity of LouisvilleLouisvilleUSA
  4. 4.Department of Computer Engineering and Computer ScienceUniversity of LouisvilleLouisvilleUSA

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