Table 1 The basic characters of 32 SNPs located in 7 genes

From: Genetic polymorphism association analysis of SNPs on the species conservation genes of Tan sheep and Hu sheep

SNP Gene A B HWE Tan sheep MAF-Tan HWE_Tan Hu sheep MAF-Hu HWE_Hu
SNP3 GH T C 0.2568 8/84/158 0.2 0.5536 8/70/96 0.2471 0.4136
SNP4 GH G A 0.2568 8/84/158 0.2 0.5536 8/70/96 0.2471 0.4136
SNP8 GH C T 1 0/14/236 0.028 1 2/40/132 0.1264 1
SNP9 GH T A 0.4425 0/14/236 0.028 1 3/39/132 0.1293 1
SNP10 GHR G A 0.1245 7/60/183 0.148 0.4501 15/64/95 0.2701 0.4405
SNP12 GHR C T 0.5809 20/96/134 0.272 0.6329 27/85/62 0.3994 0.8752
SNP15 NPY A G 1 5/55/190 0.13 0.5819 2/41/131 0.1293 0.7428
SNP18 NPY G A 0.8032 19/100/131 0.276 1 12/63/99 0.25 0.6858
SNP20 NPY A T 1 2/40/208 0.088 1 2/39/133 0.1236 1
SNP21 LEPTIN A G 0.1999 0/24/226 0.048 1 3/22/149 0.0805 0.08154
SNP22 LEPTIN G A 1 0/4/246 0.008 1 0/0/174 0 1
SNP24 LEPTIN C 0 1 0/0/248 0 1 0/0/174 0 1
SNP25 LEPTIN G A 0.04198 1/7/242 0.018 0.07063 0/0/174 0 1
SNP28 LEPTIN G A 0.3478 1/14/235 0.032 0.2194 0/11/163 0.0316 1
SNP29 H-FABP A G 0.9071 15/91/144 0.242 0.8643 22/84/68 0.3678 0.7443
SNP32 H-FABP A G 1 0/3/247 0.006 1 0/0/174 0 1
SNP34 H-FABP T C 0.9065 15/90/145 0.24 0.8623 22/84/68 0.3678 0.7443
SNP35 H-FABP C G 0.7262 15/90/145 0.24 0.8623 23/83/68 0.3707 0.8712
SNP36 H-FABP T A 0.7262 15/90/145 0.24 0.8623 23/83/68 0.3707 0.8712
SNP39 H-FABP A G 0.9071 15/91/144 0.242 0.8643 22/84/68 0.3678 0.7443
SNP41 H-FABP C T 1 12/76/162 0.2 0.4299 13/80/81 0.3046 0.3697
SNP42 H-FABP C T 0.6007 1/32/216 0.0683 1 0/5/169 0.0144 1
SNP45 H-FABP T C 0.9065 15/90/145 0.24 0.8623 22/84/68 0.3678 0.7443
SNP46 H-FABP G A 0.5801 1/31/218 0.066 1 0/5/169 0.0144 1
SNP47 MSTN A 0 1 0/0/250 0 1 0/0/174 0 1
SNP48 MSTN A 0 1 0/0/250 0 1 0/0/174 0 1
SNP50 MSTN A 0 1 0/0/250 0 1 0/0/174 0 1
SNP51 MSTN T 0 1 0/0/250 0 1 0/0/174 0 1
SNP54 MSTN A 0 1 0/0/249 0 1 0/0/174 0 1
SNP57 MSTN A 0 1 0/0/250 0 1 0/0/174 0 1
SNP61 MSTN T C 1 0/24/226 0.048 1 0/7/167 0.0201 1
SNP69 CAST A G 0.6796 46/124/80 0.432 0.8982 12/80/82 0.2989 0.2767
  1. HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency
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