Abstract
Multiple gene transfer (MGT) technology has become a powerful tool for basic and applied plant biology research in recent years. Despite some notable successes in obtaining plant lines harbouring multiple transgenes, these methods are still generally unwieldy and costly. We report here a straightforward and cost effective strategy, utilizing commonly available restriction enzymes for the transfer of multiple genes into plants, hence greatly widening the accessibility of MGT. This methodology exploits the specific ‘nested’ arrangement of a pair of isocaudomer restriction enzymes (for example XbaI—AvrII–XbaI) so that through the alternate use of these two enzymes in a reiterative fashion multiple genes/constructs (up to five in this study) could be ‘stacked’ together with ease. In a proof-of-concept experiment, we constructed a plant transformation vector containing three reporter gene expression cassettes flanked by two matrix attachment region sequences. The expression of all three genes was confirmed in transgenic Arabidopsis thaliana. The usefulness of this technology was further validated by the construction of a plant transformation vector containing five transgenes for the production of eicosapentaenoic acid (EPA, C20∆5,8,11,14,17), a polyunsaturated essential fatty acid found in fish oils that is beneficial for health. In addition, we constructed four more vectors, incorporating one seed specific and three promoters conferring constitutive expression. These expression cassettes are flanked by a different isocaudomer pair (AvrII—SpeI–AvrII) and four other unique restriction sites, allowing the exchange of promoters and terminators of choice.
Similar content being viewed by others
Abbreviations
- AA:
-
Arachidonic acid
- ALA:
-
α-Linolenic acid
- DHA:
-
Docosahexaenoic acid
- D8:
-
Δ8 Desaturase gene
- D5:
-
Δ5 Desaturase gene
- D15:
-
Δ15 Desaturase gene
- D17:
-
Δ17 Desaturase gene
- E9:
-
Δ9 Elongase gene
- EDA:
-
Eicosadienoic acid
- EPA:
-
Eicosapentaenoic acid
- ETA:
-
Eicosatetraenoic acid
- ETrA:
-
Eicosatrienoic acid
- GFP:
-
Green fluorescent protein
- GUS:
-
β-Glucuronidase gene
- LA:
-
Linoleic acid
- MARs:
-
Matrix attachment regions
- MCS:
-
Multiple cloning site
- MGT:
-
Multiple gene transfer
- MISSA:
-
Multiple-round in vivo site-specific assembly
- MS:
-
Murashige and Skoog
- PEC:
-
Plant expression cassette
- tNOS:
-
Nos terminator
- VLCPUFAs:
-
Very long chain polyunsaturated fatty acids
- ZFNs:
-
Zinc finger nucleases
- 35S:
-
CaMV 35S promoter
References
Abbadi A, Domergue F, Bauer J, Napier JA, Welti R, Zähringer U, Cirpus P, Heinz E (2004) Biosynthesis of very-long-chain polyunsaturated fatty acids in transgenic oilseeds: constraints on their accumulation. Plant Cell 16:2734–2748
Allen GC, Hall G, Michalowski S, Newman W, Spiker S, Weissinger AK, Thompson WF (1996) High-level transgene expression in plant cells: effects of a strong scaffold attachment region from tobacco. Plant Cell 8:899–913
Breyne P, Van Montagu M, Gheysen G (1994) The role of scaffold attachment regions in the structural and functional organization of plant chromatin. Transgenic Res 3:195–202
Cao J, Zhao JZ, Tang J, Shelton A, Earle E (2002) Broccoli plants with pyramided cry1Ac and cry1C Bt genes control diamondback moths resistant to Cry1A and Cry1C proteins. Theor Appl Genet 105:258–264
Chalfie M, Tu Y, Euskirchen G, Ward WW, Prasher DC (1994) Green fluorescent protein as a marker for gene expression. Science 263:802–805
Chen L, Marmey P, Taylor NJ, Brizard JP, Espinoza C, D’Cruz P, Huet H, Zhang S, de Kochko A, Beachy RN (1998) Expression and inheritance of multiple transgenes in rice plants. Nat Biotechnol 16:1060–1064
Chen QJ, Zhou HM, Chen J, Wang XC (2006) A Gateway-based platform for multigene plant transformation. Plant Mol Biol 62:927–936
Chen QJ, Xie M, Ma XX, Dong L, Chen J, Wang XC (2010) MISSA is a highly efficient in vivo DNA assembly method for plant multiple-gene transformation. Plant Physiol 153:41–51
Christensen AH, Sharrock RA, Quail PH (1992) Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation. Plant Mol Biol 18:675–689
Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735–743
Depicker A, Stachel S, Dhaese P, Zambryski P, Goodman H (1982) Nopaline synthase: transcript mapping and DNA sequence. J Mol Appl Genet 1:561–573
D’Halluin K, De Block M, Denecke J, Janssen J, Leemans J, Reynaerts A, Botterman J (1992) The bar gene as selectable and screenable marker in plant engineering. Methods Enzymol 216:415–426
Engler C, Kandzia R, Marillonnet S (2008) A one pot, one step, precision cloning method with high throughput capability. PLoS ONE 3:e3647
Engler C, Gruetzner R, Kandzia R, Marillonnet S (2009) Golden gate shuffling: a one-pot DNA shuffling method based on type IIs restriction enzymes. PLoS ONE 4:e5553
Fraser TCM, Qi B, Elhussein S, Chatrattanakunchai S, Stobart AK, Lazarus CM (2004) Expression of the Isochrysis C18-delta9 polyunsaturated fatty acid specific elongase component alters Arabidopsis glycerolipid profiles. Plant Physiol 135:859–866
Goderis IJWM, De Bolle MFC, François IEJA, Wouters PFJ, Broekaert WF, Cammue BPA (2002) A set of modular plant transformation vectors allowing flexible insertion of up to six expression units. Plant Mol Biol 50:17–27
Hamilton CM (1997) A binary-BAC system for plant transformation with high-molecular-weight DNA. Gene 200:107–116
Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907
Kang Y, Zarzycki-Siek J, Walton CB, Norris MH, Hoang TT (2010) Multiple FadD acyl-CoA synthetases contribute to differential fatty acid degradation and virulence in Pseudomonas aeruginosa. PLoS ONE 5:e13557
Karunanandaa B, Qi Q, Hao M, Baszis SR, Jensen PK, Wong YHH, Jiang J, Venkatramesh M, Gruys KJ, Moshiri F (2005) Metabolically engineered oilseed crops with enhanced seed tocopherol. Metab Eng 7:384–400
Krichevsky A, Zaltsman A, King L, Citovsky V (2012) Expression of complete metabolic pathways in transgenic plants. Biotechnol Genet Eng Rev 28:1–13
Laliotis G, Bizelis I, Rogdakis E (2010) Comparative approach of the de novo fatty acid synthesis (Lipogenesis) between ruminant and non ruminant mammalian species: from biochemical level to the main regulatory lipogenic genes. Curr Genomics 11:168
Lebedenko EN, Birikh KR, Plutalov OV, Berlin YuA (1991) Method of artificial DNA splicing by directed ligation (SDL). Nucleic Acids Res 19:6757–6761
Li MZ, Elledge SJ (2005) MAGIC, an in vivo genetic method for the rapid construction of recombinant DNA molecules. Nat Genet 37:311–319
Lin L, Liu YG, Xu X, Li B (2003) Efficient linking and transfer of multiple genes by a multigene assembly and transformation vector system. Proc Natl Acad Sci USA 100:5962–5967
Liu YG, Shirano Y, Fukaki H, Yanai Y, Tasaka M, Tabata S, Shibata D (1999) Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning. Proc Natl Acad Sci USA 96:6535–6540
McElroy D, Zhang W, Cao J, Wu R (1990) Isolation of an efficient actin promoter for use in rice transformation. Plant Cell 2:163–171
Naqvi S, Farré G, Sanahuja G, Capell T, Zhu C, Christou P (2010) When more is better: multigene engineering in plants. Trends Plant Sci 15:48–56
Qi B, Fraser T, Mugford S, Dobson G, Sayanova O, Butler J, Napier JA, Stobart AK, Lazarus CM (2002) Identification of a cDNA encoding a novel C18-Delta(9) polyunsaturated fatty acid-specific elongating activity from the docosahexaenoic acid (DHA)-producing microalga, Isochrysis galbana. FEBS Lett 510:159–165
Qi B, Fraser T, Mugford S, Dobson G, Sayanova O, Butler J, Napier JA, Stobart AK, Lazarus CM (2004) Production of very long chain polyunsaturated omega-3 and omega-6 fatty acids in plants. Nat Biotechnol 22:739–745
Sambrook J, Russel DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, New York
Spiker S, Thompson WF (1996) Nuclear matrix attachment regions and transgene expression in plants. Plant Physiol 110:15–21
Tzfira T, Tian GW, Lacroix B, Vyas S, Li J, Leitner-Dagan Y, Krichevsky A, Taylor T, Vainstein A, Citovsky V (2005) pSAT vectors: a modular series of plasmids for autofluorescent protein tagging and expression of multiple genes in plants. Plant Mol Biol 57:503–516
Weber E, Engler C, Gruetzner R, Werner S, Marillonnet S (2011) A modular cloning system for standardized assembly of multigene constructs. PLoS ONE 6:e16765
Wu G, Truksa M, Datla N, Vrinten P, Bauer J, Zank T, Cirpus P, Heinz E, Qiu X (2005) Stepwise engineering to produce high yields of very long-chain polyunsaturated fatty acids in plants. Nat Biotechnol 23:1013–1017
Xiang C, Han P, Lutziger I, Wang K, Oliver DJ (1999) A mini binary vector series for plant transformation. Plant Mol Biol 40:711–717
Xue H, Yang YT, Wu CA, Yang GD, Zhang MM, Zheng CC (2005) TM2, a novel strong matrix attachment region isolated from tobacco, increases transgene expression in transgenic rice calli and plants. Theor Appl Genet 110:620–627
Yadav NS, Wierzbicki A, Aegerter M, Caster CS, Perez-Grau L, Kinney AJ, Hitz WD, Booth JR Jr, Schweiger B, Stecca KL (1993) Cloning of higher plant omega-3 fatty acid desaturases. Plant Physiol 103:467–476
Ye X, Al-Babili S, Kloeti A, Jing Z, Lucca P, Beyer P, Potrykus I (2000) Engineering the provitamin A (beta-carotene) biosynthetic pathway into (carotenoid-free) rice endosperm. Science 287:303–305
Zeevi V, Liang Z, Arieli U, Tzfira T (2012) Zinc finger nuclease and homing endonuclease-mediated assembly of multigene plant transformation vectors. Plant Physiol 158:132–144
Zhao JZ, Cao J, Li Y, Collins HL, Roush RT, Earle ED, Shelton AM (2003) Transgenic plants expressing two Bacillus thuringiensis toxins delay insect resistance evolution. Nat Biotechnol 21:1493–1497
Acknowledgments
This work was supported by the National Natural Science Foundation of China (Grant No. 30970222) and genetically modified organisms breeding major projects of China (Grant No. 009ZX08005-024B).
Conflict of interest
The authors declare competing interest for the pXAX vectors which are subjected to the patent law of China (Patent No. ZL200810160116.6). pXAX1GW and pXAX2GW are also subjected to the GATEWAY® patent law. However, all the vectors could be provided to the scientific community for research purposes only.
Author information
Authors and Affiliations
Corresponding authors
Additional information
Quanxi Sun and Jiang Liu contributed equally to this work.
Rights and permissions
About this article
Cite this article
Sun, Q., Liu, J., Li, Y. et al. Creation and validation of a widely applicable multiple gene transfer vector system for stable transformation in plant. Plant Mol Biol 83, 391–404 (2013). https://doi.org/10.1007/s11103-013-0096-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11103-013-0096-2