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Origins of Life and Evolution of Biospheres

, Volume 41, Issue 1, pp 51–71 | Cite as

The Emergence and Evolution of Life in a “Fatty Acid World” Based on Quantum Mechanics

  • Arvydas Tamulis
  • Mantas Grigalavicius
Theoretical Modeling

Abstract

Quantum mechanical based electron correlation interactions among molecules are the source of the weak hydrogen and Van der Waals bonds that are critical to the self-assembly of artificial fatty acid micelles. Life on Earth or elsewhere could have emerged in the form of self-reproducing photoactive fatty acid micelles, which gradually evolved into nucleotide-containing micelles due to the enhanced ability of nucleotide-coupled sensitizer molecules to absorb visible light. Comparison of the calculated absorption spectra of micelles with and without nucleotides confirmed this idea and supports the idea of the emergence and evolution of nucleotides in minimal cells of a so-called Fatty Acid World. Furthermore, the nucleotide-caused wavelength shift and broadening of the absorption pattern potentially gives these molecules an additional valuable role, other than a purely genetic one in the early stages of the development of life. From the information theory point of view, the nucleotide sequences in such micelles carry positional information providing better electron transport along the nucleotide-sensitizer chain and, in addition, providing complimentary copies of that information for the next generation. Nucleotide sequences, which in the first period of evolution of fatty acid molecules were useful just for better absorbance of the light in the longer wavelength region, later in the PNA or RNA World, took on the role of genetic information storage.

Keywords

Self-reproducing fatty acid micelles Fatty acid world Photoexcited electron tunneling Quantum mechanical emergence of genetic material Protocells 

Supplementary material

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References

  1. Basis Set Databases. Available via https://bse.pnl.gov/bse/portal
  2. Becke AD (1988) Density functional exchange energy approximation with correct asymptotic behavior. Phys Rev A 38:3098–3100CrossRefPubMedGoogle Scholar
  3. DeClue MS, Monnard P-A, Bailey JA, Maurer SE, Collis GE, Ziock HJ, Rasmussen S, Boncella JM (2009) Nucleobase mediated, photocatalytic vesicle formation from an ester precursor. J Am Chem Soc 131:931–933CrossRefPubMedGoogle Scholar
  4. Dreizler RM, Gross EKU (1990) Density functional theory. Springer-Verlag, BerlinGoogle Scholar
  5. Jensen F (1999) Introduction to computational chemistry. Wiley, Chichester-TorontoGoogle Scholar
  6. Lee CT, Yang WT, Parr RG (1988) Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Phys Rev B 37:785–789CrossRefGoogle Scholar
  7. Neese F (2003) A spectroscopy oriented configuration interaction procedure. J Chem Phys 119:9428–9443CrossRefGoogle Scholar
  8. Neese F (2009) ORCA – an ab initio, density functional and semiempirical program package, Version 2.6.04 Max-Planck-Institut fuer Bioanorganische Chemie, Muelheim an der Ruhr and Universitaet BonnGoogle Scholar
  9. Perdew JP, Burke K, Ernzerhof M (1996) Generalized gradient approximation made simple. Phys Rev Lett 77:3865–3868CrossRefPubMedGoogle Scholar
  10. Rasmussen S, Chen L, Nilsson M, Abe S (2003) Bridging nonliving and living matter. Artificial Life 9:267–316Google Scholar
  11. Rasmussen S, Bailey J, Boncella J, Chen L, Collis G, Colgate S, DeClue M, Fellermann H, Goranovic G, Jiang Y, Knutson C, Monnard P-A, Mouffouk F, Nielsen PE, Sen A, Shreve A, Tamulis A, Travis B, Weronski P, Woodruff WH, Zhang J, Zhou X, Ziock H (2008) Assembly of a minimal protocell. In: Rasmussen S, Bedau MA, Chen L, Krakauer DC, Deamer D, Packard NH, Stadler PF (eds) Protocells: Bridging nonliving and living matter. MIT, Cambridge, pp 125–156Google Scholar
  12. Rinkevicius Z, Tamulis A, Tamuliene J (2006) β-diketo structure for quantum information processing. Lithuanian Journal of Physics 46:413–416CrossRefGoogle Scholar
  13. Schmidt MW, Baldridge KK, Boatz JA et al (1993) General atomic and molecular electronic structure system. J Comput Chem 14:1347–1363CrossRefGoogle Scholar
  14. Tamuliene J, Tamulis A, Kulys J (2004) Electronic structure of dodecyl syringate radical suitable for ESR molecular quantum computers. Nonlinear Analysis: Modeling and Control 9:185–196Google Scholar
  15. Tamulis A (2008a) Quantum self-assembly of artificial minimal living cells and molecular electronics control. Viva Origino 36:10–19Google Scholar
  16. Tamulis A (2008b) Quantum mechanical control of artificial minimal living cells. NeuroQuantology 6:311–322Google Scholar
  17. Tamulis A (2008c) Quantum mechanical interpretation of the origin of life. In: Ruksenas O (ed) Science in the Faculty of Natural Sciences of Vilnius University, Proceedings of 5th science conference, Vilnius, October 03, 2008, Publishing house of Vilnius University, pp 7–19Google Scholar
  18. Tamulis A, Tamulis V (2007a) Quantum self-assembly and photoinduced electron tunneling inphotosynthetic system of minimal living cell. Viva Origino 35:66–72Google Scholar
  19. Tamulis A, Tamulis V (2007b) Question 9: Quantum self-assembly and photoinduced electron tunneling in photosynthetic systems of artificial minimal living cells. OLEB 37:473–476Google Scholar
  20. Tamulis A, Tamulis V (2008) Quantum mechanical design of molecular electronics OR gate for regulation of minimal cell functions. Journal of Computational and Theoretical Nanoscience 5:545–553Google Scholar
  21. Tamulis A, Tamuliene J, Tamulis V (2003) Quantum mechanical design of photoactive molecular machines and logical devices. In: Nalwa HS (ed) Handbook of photochemistry and photobiology., Volume 3, Supramolecular photochemistry. American Scientific Publishers, Stevenson Ranch, pp 495–553Google Scholar
  22. Tamulis A, Tamuliene J, Tamulis V, Ziriakoviene A (2004) Quantum mechanical design of molecular computers elements suitable for self-assembling to quantum computing living systems. Solid State Phenomena, Scitec Publications, Switzerland 97–98:175–180Google Scholar
  23. Tamulis A, Tamulis V, Graja A (2006) Quantum mechanical modeling of self-assembly and photoinduced electron transfer in PNA based artificial living organism. Journal of Nanoscience and Nanotechnology 6:965–973CrossRefPubMedGoogle Scholar
  24. Tamulis A, Tsifrinovich VI, Tretiak S, Berman GP, Allara DL (2007) Neutral radical molecules ordered in self-assembled monolayer systems for quantum information processing. Chem Phys Lett 436:144–149CrossRefGoogle Scholar
  25. Tamulis A, Tamulis V, Ziock H, Rasmussen S (2008) Influence of water and fatty acid molecules on quantum photoinduced electron tunneling in photosynthetic systems of PNA based self-assembled protocells. In: Ross R, Mohanty S (eds) Multiscale simulation methods for nanomaterials. Wiley, New Jersey, pp 9–28Google Scholar
  26. TURBOMOLE V6.0 (2009) A development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH, 1989–2007, TURBOMOLE GmbH, since 2007. Available via http://www.turbomole.com
  27. Vosko SH, Wilk L, Nusair M (1980) Accurate spin-dependent electron liquid correlation energies for local spin density calculations: a critical analysis. Can J Phys 58:1200–1211CrossRefGoogle Scholar

Copyright information

© Springer Science+Business Media B.V. 2010

Authors and Affiliations

  1. 1.Vilnius University Institute of Theoretical Physics and AstronomyVilniusLithuania

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