Skip to main content
Log in

Genetics of resistance to yellow rust in PBW343 × Kenya Kudu recombinant inbred line population and mapping of a new resistance gene YrKK

  • Published:
Molecular Breeding Aims and scope Submit manuscript

Abstract

Yellow or stripe rust, caused by Puccinia striiformis f. sp. tritici, is an important disease of common wheat (Triticum aestivum L.) worldwide. A recombinant inbred line (RIL) population, derived from the cross PBW343 × Kenya Kudu, was phenotyped for yellow rust reaction in the field at the CIMMYT research station near Toluca, Mexico, during 2010 and 2011. Segregation results indicated the presence of a race-specific resistance gene, temporarily designated as YrKK, in Kenya Kudu that conferred immunity to adult plants in field trials, despite conferring only slight reductions in seedling reactions in greenhouse tests with three Mexican pathotypes. A minimum of four minor genes having additive effects also segregated in the population and were likely derived from both parents. A total of 635 simple sequence repeat (SSR) primers were screened for polymorphism surveys on the parents, and resistant (YrKK-possessing RILs) and susceptible (YrKK-lacking RILs) bulks identified four polymorphic markers. These markers were located on the short arm of chromosome 2B. Genotyping of the entire RIL population identified Xgwm148 and Xwmc474 as the most closely linked proximal and distal flanking SSR markers, with respective genetic distances of 3.6 and 1.8 cM from YrKK. Four yellow rust resistance genes (Yr27, Yr31, Yr41, and YrP81) are located on chromosome 2BS; however, their specificity to pathogen pathotypes and host reactions in seedling and adult plants indicate that YrKK is a new resistance gene.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Cheng P, Chen XM (2010) Molecular mapping of a gene for stripe rust resistance in spring wheat cultivar IDO377s. Theor Appl Genet 121:195–204

    Article  PubMed  CAS  Google Scholar 

  • CIMMYT (2005) Laboratory protocols: CIMMYT applied molecular genetics laboratory, 3rd edn. CIMMYT, Mexico DF

    Google Scholar 

  • Daniel DL, Stubbs RW, Parlevliet JE (1994) Evolution of virulence patterns in yellow rust races and its implications for breeding for resistance in wheat in Kenya. Euphytica 80:165–170

    Article  Google Scholar 

  • Eriksen L, Afshari F, Christiansen MJ, McIntosh RA, Jahoor A, Wellings CR (2004) Yr32 for resistance to yellow rust present in the wheat cultivar Carstens V. Theor Appl Genet 108:567–575

    Article  PubMed  CAS  Google Scholar 

  • Flor HH (1942) Inheritance of pathogenicity in Melampsora lini. Phytopathology 32:653–669

    Google Scholar 

  • Guyomarc’h H, Sourdille P, Charmet G, Edwards KJ, Bernard M (2002) Characterization of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat. Theor Appl Genet 104:1164–1172

    Article  PubMed  Google Scholar 

  • Herrera-Foessel SA, Lagudah ES, Huerta-Espino J, Hayden MJ, Bariana HS, Singh D, Singh RP (2011) New slow-rusting leaf rust and stripe rust resistance genes Lr67 and Yr46 in wheat are pleiotropic or closely linked. Theor Appl Genet 122:239–249

    Article  PubMed  Google Scholar 

  • Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172–175

    Google Scholar 

  • Lowe I, Jankuloski L, Chao S, Chen X, See D, Dubcovsky J (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of yellow rust in hexaploid wheat. Theor Appl Genet 123:143–157

    Article  PubMed  Google Scholar 

  • Luo PG, Hu XY, Ren ZL, Zhang HY, Shu K, Yang ZJ (2008) Allelic analysis of yellow rust resistance genes on wheat chromosome 2BS. Genome 51:922–927

    Article  PubMed  CAS  Google Scholar 

  • Manly FF, Cudmore RH, Meer JM (2001) Map Manager QTX, cross-platform software for genetic mapping. Mamm Genome 12:930–932

    Article  PubMed  CAS  Google Scholar 

  • McDonald D, McIntosh RA, Wellings CR, Singh RP, Nelson JC (2004) Cytogenetical studies in wheat XIX. Location and linkage studies on gene Yr27 for resistance to yellow (stripe) rust. Euphytica 136:239–248

    Article  CAS  Google Scholar 

  • McIntosh RA, Wellings CR, Park RF (1995) Wheat rusts: an atlas of resistance genes. CSIRO, East Melbourne

    Book  Google Scholar 

  • McIntosh RA, Yamazaki Y, Dubcovsky J, Rogers J, Morris C, Somers DJ, Appels R, Devos KM (2008) Catalogue of gene symbols for wheat. 11th international wheat genetics symposium, http://wheat.pw.usda.gov/GG2/Triticum/wgc/2008/GeneSymbol.pdf

  • McIntosh RA, Dubcovsky J, Rogers WJ, Morris C, Appels R, Xia XC (2009) Catalogue of gene symbols for wheat: 2009 supplement. http://www.shigen.nig.ac.jp/wheat/komugi/genes/macgene/supplement2009.pdf

  • McIntosh RA, Dubcovsky J, Rogers WJ, Morris C, Appels R, Xia XC (2010) Catalogue of gene symbols for wheat: 2010 supplement. http://www.shigen.nig.ac.jp/wheat/komugi/genes/macgene/supplement2010.pdf

  • McIntosh RA, Dubcovsky J, Rogers WJ, Morris CF, Appels R, Xia XC (2011) Catalogue of gene symbols for wheat: 2011 supplement. Ann Wheat Newsl 57:303–321

    Google Scholar 

  • McNeal FH, Konzak CF, Smith EP, Tate WS, Russell TS (1971) A uniform system for recording and processing cereal research data. ARS Bull 34–121. USDA, Washington, DC

  • Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88:9828–9832

    Article  PubMed  CAS  Google Scholar 

  • Peterson RF, Campbell AB, Hannah AE (1948) A diagrammatic scale for estimating rust intensity of leaves and stems of cereals. Can J Res 26:496–500

    Article  Google Scholar 

  • Priestley RH (1978) Detection of increased virulence in populations of wheat yellow rust. In: Scott PR, Bainbridge A (eds) Plant disease epidemiology. Blackwell Scientific Publishers, Oxford, pp 63–70

    Google Scholar 

  • Pu ZJ, Chen GY, Wei YM, Yang WY, Yan ZH, Zheng YL (2010) Identification and molecular tagging of a yellow rust resistance gene in wheat line P81. Plant Breed 129:53–57

    Article  CAS  Google Scholar 

  • Qi LL, Echalier B, Chao S, Lazo GR et al (2004) A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics 168:701–712

    Article  PubMed  CAS  Google Scholar 

  • Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149:2007–2023

    PubMed  Google Scholar 

  • Roelfs AP, Singh RP, Saari EE (1992) Rust disease of wheat: concepts and methods of disease management. CIMMYT, Mexico DF

    Google Scholar 

  • Sharp PJ, Kreis M, Shewry PR, Gale MD (1988) Location of β-amylase sequence in wheat and its relatives. Theor Appl Genet 75:286–290

    Article  CAS  Google Scholar 

  • Singh S, Bowden RL (2011) Molecular mapping of adult-plant race-specific leaf rust resistance gene Lr12 in bread wheat. Mol Breed 28:137–142

    Article  Google Scholar 

  • Singh RP, Rajaram S (1994) Genetics of adult-plant resistance to stripe rust in 10 spring bread wheats. Euphytica 72:1–7

    Article  Google Scholar 

  • Singh RP, William HM, Huerta-Espino J, Crosby M (2003) Identification and mapping of gene Yr31 for resistance to yellow rust in Triticum aestivum cultivar Pastor. In: Pogna NE, Romano N, Pogna EA, Galterio G (eds) Proceedings of 10th international wheat genetics symposium. Instituto Sperimentale per la Cerealcoltura, Rome, Italy, pp 411–413

    Google Scholar 

  • Somers DJ, Isaac P, Edwards K (2004) A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.). Theor Appl Genet 109:1105–1114

    Article  PubMed  CAS  Google Scholar 

  • Sourdille P, Singh S, Cadalen T, Brown-Guedira GL, Gay G, Qi L, Gill BS, Dufour P, Murigneux A, Bernard M (2004) Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat (Triticum aestivum L.). Func Integr Genomics 4(1):12–25

    Google Scholar 

  • Sui XX, Wang MN, Chen XM (2009) Molecular mapping of a stripe rust resistance gene in spring wheat cultivar Zak. Phytopathology 99:1209–1215

    Article  PubMed  CAS  Google Scholar 

  • Vogel JP, Garvin DF, Mockler TC, Schmutz J et al (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463:763–768

    Article  CAS  Google Scholar 

  • Wellings CR (1992) Resistance to yellow (stripe) rust in selected spring wheats. Vortrage fur Pflanzenzucht 24:273–275

    Google Scholar 

  • Worland AJ, Law CN (1986) Genetic analysis of chromosome 2D of wheat I. The location of genes affecting height, day-length insensitivity, hybrid dwarfism and yellow rust resistance. Zeitschrift fur Pflanzenzuchtung 96:331–345

    Google Scholar 

  • Zhang H, Xia XC, He ZH, Li X, Li ZF, Liu DQ (2011) Molecular mapping of leaf rust resistance gene LrBi16 in Chinese wheat cultivar Bimai 16. Mol Breed 28:527–534

    Article  CAS  Google Scholar 

Download references

Acknowledgments

The authors would like to thank the State Scholarship Fund, China Scholarship Council and SAGARPA-CONACYT of Mexico (Fondo Sectorial project 146788) for funding. We are very grateful to Ms. Emma Quilligan for thorough English editing of this manuscript and to Prof. R. A. McIntosh and Sybil Herrera for technical editing and suggestions.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sukhwinder Singh.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOCX 25 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Li, Z., Singh, S., Singh, R.P. et al. Genetics of resistance to yellow rust in PBW343 × Kenya Kudu recombinant inbred line population and mapping of a new resistance gene YrKK . Mol Breeding 32, 821–829 (2013). https://doi.org/10.1007/s11032-013-9909-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11032-013-9909-x

Keywords

Navigation