Abstract
In order to monitor changes in the concentrations of metals in the soil, different microbial indices such as BIOLOG®, microbial carbon (Cmic), basal respiration, and culturable microbe’s most probable number were used. We compared these methods and wanted to discover which method was the best at measuring slight changes in the amounts of heavy metals. Factor analyses were applied to the BIOLOG® data and metal concentrations so the combined effects of heavy metals on microbes could be analyzed via statistical data reduction and the distribution patterns of metal concentration could also be revealed. The results showed that the BIOLOG® method could barely detect subtle characteristic changes in the soil samples, while the Cmic method was more sensitive. Furthermore, different heavy metals did not have the same origin/source, and their effects on microbial indices should be analyzed separately. Significant positive correlations between Cmic and metals were observed and suggested the limitation of using traditional microbial parameters as metal pollution indicators. Among all the soil characteristics in our study, pH seemed to be the most active abiotic factor that affected microorganisms.
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Anderson, J. P. E., & Domsch, K. H. (1978). A physiological method for the quantitative measurement of microbial biomass in soils. Soil Biology & Biochemistry, 10, 215–221. doi:10.1016/0038-0717(78)90099-8.
Brookes, P. C. (1995). The use of microbial parameters in monitoring soil pollution by heavy metals. Biology and Fertility of Soils, 19, 269–279.
Broos, K., Macdonald, L. M. J., Warne, M. S., Heemsbergen, D. A., Barnes, M. B., Bell, M. et al. (2007). Limitations of soil microbial biomass carbon as an indicator of soil pollution in the field. Soil Biology & Biochemistry, 39, 2693–2695. doi:10.1016/j.soilbio.2007.05.014.
Campbell, C. D., Grayston, S. J., & Hirst, D. J. (1997). Use of rhizosphere carbon sources in sole carbon source tests to discriminate soil microbial communities. Journal of Microbiological Methods, 30, 33–41. doi:10.1016/S0167-7012(97)00041-9.
Chaperon, S., & Sauve, S. (2007). Toxicity interaction of metals (Ag, Cu, Hg, Zn) to urease and dehydrogenase activities in soils. Soil Biology & Biochemistry, 39, 2329–2338. doi:10.1016/j.soilbio.2007.04.004.
Demoling, L. A., & Baath, E. (2008). Use of pollution-induced community tolerance of the bacterial community to detect phenol toxicity in soil. Environmental Toxicology and Chemistry, 27, 334–340. doi:10.1897/07-289R.1.
Dong, M. (1997). Survey, observation and analysis of terrestrial biocommunities. Beijing: Standard Press of China.
Eleiwa, M. M. E. (2004). Effect of different concentrations of zinc or cadmium on Vigna sinensis plants in presence or absence of arbuscular mycorrhizal fungi and rhizobia. Egyptian Journal of Soil Science, 44, 385–405.
Ellis, R. J., Neish, B., Trett, M. W., Best, J. G., Weightman, A. J., Morgan, P., et al. (2001). Comparison of microbial and meiofaunal community analyses for determining impact of heavy metal contamination. Journal of Microbiological Methods, 45, 171–185. doi:10.1016/S0167-7012(01)00245-7.
Fierer, N., Bradford, M. A., & Jackson, R. B. (2007). Toward an ecological classification of soil bacteria. Ecology (Washington D C), 88, 1354–1364.
Garland, J. L., & Mills, A. L. (1991). Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization. Applied and Environmental Microbiology, 57, 2151–2159.
Giller, K. E., Witter, E., & McGrath, S. P. (1998). Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: A review. Soil Biology & Biochemistry, 30, 1389–1414. doi:10.1016/S0038-0717(97)00270-8.
Hitzl, W., Henrich, M., Kessel, M., & Insam, H. (1997). Application of multivariate analysis of variance and related techniques in soil studies with substrate utilization tests. Journal of Microbiological Methods, 30, 81–89. doi:10.1016/S0167-7012(97)00047-X.
Hu, Q., Qi, H. Y., Zeng, J. H., & Zhang, H. X. (2007). Bacterial diversity in soils around a lead and zinc mine. Journal of Environmental Sciences (China), 19, 74–79. doi:10.1016/S1001-0742(07)60012-6.
Jansen, E., Michels, M., Til, M., & Doelman, P. (1994). Effects of heavy metals in soil on microbial diversity and activity as shown by the sensitivity-resistance index, an ecologically relevant parameter. Biology and Fertility of Soils, 17, 177–184. doi:10.1007/BF00336319.
Konopka, A., Oliver, L., & Turco, R. F. Jr. (1998). The use of carbon substrate utilization patterns in environmental and ecological microbiology. Microbial Ecology, 35, 103–115. doi:10.1007/s002489900065.
Lazzaro, A., Widmer, F., Sperisen, C., & Frey, B. (2008). Identification of dominant bacterial phylotypes in a cadmium-treated forest soil. FEMS Microbiology Ecology, 63, 143–155.
Li, W. H., Zhang, C. B., Gao, G. J., Zan, Q. J., & Yang, Z. Y. (2007). Relationship between Mikania micrantha invasion and soil microbial biomass, respiration and functional diversity. Plant and Soil, 296, 197–207. doi:10.1007/s11104-007-9310-9.
Liao, M., Chen, C. L., & Huang, C. Y. (2005). Effect of heavy metals on soil microbial activity and diversity in a reclaimed mining wasteland of red soil area. Journal of Environmental Sciences (China), 17, 832–837. doi:10.1016/j.ecoenv.2005.12.013.
Liao, M., & Xie, X. M. (2007). Effect of heavy metals on substrate utilization pattern, biomass, and activity of microbial communities in a reclaimed mining wasteland of red soil area. Ecotoxicology and Environmental Safety, 66, 217–223.
Lu, R. K. (2000). The analysis method of soil agricultural chemistry. (pp. 22–28,106–109) Chinese Society of Soil Science. China Agricultural Science and Technology Publishing Company. (in Chinese).
National Environmental Protection Agency. (1995). National environmental quality standard of soils—China (pp. 2–3).
Niklinska, M., Chodak, M., & Laskowski, R. (2005). Characterization of the forest humus microbial community in a heavy metal polluted area. Soil Biology & Biochemistry, 37, 2185–2194. doi:10.1016/j.soilbio.2005.03.020.
Nordgren, A., Kauri, T., Baath, E., & Soderstrom, B. (1986). Soil microbial activity, mycelial lengths and physiological groups of bacteria in a heavy metal polluted area. Environmental Pollution Series A: Ecological and Biological, 41, 89–100.
Pennanen, T. (2001). Microbial communities in boreal coniferous forest humus exposed to heavy metals and changes in soil pH—a summary of the use of phospholipid fatty acids, Biolog(R) and 3H-thymidine incorporation methods in field studies. Geoderma, 100, 91–126. doi:10.1016/S0016-7061(00)00082-3.
Pennanen, T., Perkiomaki, J., Kiikkila, O., Vanhala, P., Neuvonen, S., & Fritze, H. (1998). Prolonged, simulated acid rain and heavy metal deposition: Separated and combined effects on forest soil microbial community structure. FEMS Microbiology Ecology, 27, 291–300. doi:10.1111/j.1574-6941.1998.tb00545.x.
Preston-Mafham, J., Boddy, L., & Randerson, P. F. (2002). Analysis of microbial community functional diversity using sole-carbon-source utilisation profiles—a critique. FEMS Microbiology Ecology, 42, 1–14.
Sandaa, R. A., Torsvik, V., & Enger, O. (2001). Influence of long-term heavy-metal contamination on microbial communities in soil. Soil Biology & Biochemistry, 33, 287–295. doi:10.1016/S0038-0717(00)00139-5.
Sandaa, R. A., Torsvik, V., Enger, O., Daae, F. L., Castberg, T., & Hahn, D. (1999). Analysis of bacterial communities in heavy metal-contaminated soils at different levels of resolution. FEMS Microbiology Ecology, 30, 237–251. doi:10.1111/j.1574-6941.1999.tb00652.x.
Sardinha, M., Muller, T., Schmeisky, H., & Joergensen, R. G. (2003). Microbial performance in soils along a salinity gradient under acidic conditions. Applied Soil Ecology, 23, 237–244. doi:10.1016/S0929-1393(03)00027-1.
Schimel, J., Balser, T. C., & Wallenstein, M. (2007). Microbial stress-response physiology and its implications for ecosystem function. Ecology (Washington D C), 88, 1386–1394.
Schmidt, S. K., Costello, E. K., Nemergut, D. R., Cleveland, C. C., Reed, S. C., Weintraub, M. N., et al. (2007). Biogeochemical consequences of rapid microbial turnover and seasonal succession in soil. Ecology (Washington D C), 88, 1379–1385.
Sui, F. G., & Li, J. L. (2004). The analysis experiment of soil agricultural chemistry. (pp. 19–20) Laiyang Agricultural University, 2004 (in Chinese).
Tariq, S. R., Shah, M. H., Shaheen, N., Jaffar, M., & Khalique, A. (2008). Statistical source identification of metals in groundwater exposed to industrial contamination. Environmental Monitoring and Assessment, 138, 159–165. doi:10.1007/s10661-007-9753-8.
Zahran, H. H. (1997). Diversity, adaptation and activity of the bacterial flora in saline environments. Biology and Fertility of Soils, 25, 211–223. doi:10.1007/s003740050306.
Zhang, Y. L., Dai, J. L., Wang, R. Q., & Zhang, J. (2008). Effects of long-term sewage irrigation on agricultural soil microbial structural and functional characterizations in Shandong, China. European Journal of Soil Biology, 44, 84–91. doi:10.1016/j.ejsobi.2007.10.003.
Zwolinski, M. D. (2007). DNA sequencing: Strategies for soil microbiology. Soil Science Society of America Journal, 71, 592–600. doi:10.2136/sssaj2006.0125.
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Wang, Q., Dai, J., Yu, Y. et al. Efficiencies of different microbial parameters as indicator to assess slight metal pollutions in a farm field near a gold mining area. Environ Monit Assess 161, 495–508 (2010). https://doi.org/10.1007/s10661-009-0763-6
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DOI: https://doi.org/10.1007/s10661-009-0763-6