Simulating correlated count data
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In this study we compare two techniques for simulating count-valued random n-vectors Y with specified mean and correlation structure. The first technique is to use a lognormal-Poisson hierarchy (L-P method). A vector of correlated normals Z is generated and transformed to a vector of lognormals X. Then, Y is generated as conditionally independent Poissons with means X i . The L-P method is simple, fast, and familiar to many researchers. However, the method requires each Y i to be overdispersed (i.e., σ2 > μ), and only low correlations are possible with this method when the variables have small means. We develop a second technique to generate the elements of Y as overlapping sums (OS) of independent X j ’s (OS method). For example, suppose X, X 1, and X 2 are independent. If Y 1 = X + X 1 and Y 2 = X + X 2, then Y 1 and Y 2 are correlated because they share the common component X. A generalized version of the OS method for simulating n-vectors of two-parameter count-valued distributions is presented. The OS method is shown to address some of the shortcomings of the L-P method. In particular, underdispersed random variables can be simulated, and high correlations are feasible even when the means are small. However, negative correlations cannot be simulated with the OS method, and when n > 3, the OS method is more complicated to implement than the L-P method.
KeywordsGenerate correlated discrete Lognormal-Poisson Spatial dynamics Negative binomial Spatial ecology Taylor’s power law
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- Boswell MT, Patil GP (1970) Chance mechanisms generating the negative binomial distributions. In: Patil GP (ed). Random counts in models and structures, vol. 1. The Pennsylvania University Press, University Park and London, pp 3–22Google Scholar
- Casella G, Berger RL (2002) Statistical Inference, 2nd edn. Duxbury.Google Scholar
- Downer R, Moser E (2001) On the generation of a multivariate spatial poisson distribution, Lousiana State University, Department of Experimental Statistics, Technical Reports RR-O1-35Google Scholar
- Holgate P (1964) Estimation for the bivariate poisson distribution, Biometrika 51(1–2):241–245Google Scholar
- Nelsen RB (1987) Discrete bivariate distributions with given marginals and correlation. Commun Stat Simul 16(1):199–208Google Scholar
- Nelsen RB (1999) An introduction to copulas. Springer, New YorkGoogle Scholar
- Park CG, Shin DW (1998) An algorithm for generating correlated random variables in a class of infinitely divisible distributions. J Stat Comput Simul 61:127–139Google Scholar
- Solomon DL (1983) The spatial distribution of butterfly eggs. In: Roberts H, Thompson M (eds). Life science models vol 4. Springer-verlag, New york, pp 350–366Google Scholar
- Southwood TRE (1978) Ecological methods, with particular reference to the study of insect populations. Wiley, New YorkGoogle Scholar