Conservation Genetics

, Volume 8, Issue 2, pp 319–330 | Cite as

Clonality in the Endangered Ambrosia pumila (Asteraceae) Inferred from RAPD Markers; Implications for Conservation and Management

  • Mitchell E. McGlaughlin
  • Elizabeth A. Friar
Original Paper


Clonal plants have the ability to spread and survive over long periods of time by vegetative growth. For endangered species, the occurrence of clonality can have significant impacts on levels of genetic diversity, population structure, recruitment, and the implementation of appropriate conservation strategies. Here we␣examine clone structure in three populations of Ambrosia pumila (Nutt.) Gray (Asteraceae), a federally endangered clonal species from southern California. Ambrosia pumila is a perennial herbaceous species spreading from a rhizome, and is frequently found in dense patches of several hundred stems in a few square meters. The primary habitat for this species is upper terraces of rivers and drainages in areas that have been heavily impacted by anthropogenic disturbances and changing flood regimes. RAPD markers were employed to document the number and distribution of clones within multiple 0.25 m2 plots from each of three populations. Thirty-one multi-locus genotypes were identified from the 201 stems sampled. The spatial distribution of clones was limited with no genotypes shared between plots or populations. Mean clone size was estimated at 9.10 ramets per genet. Genets in most plots were intermingled, conforming to a guerrilla growth form. The maximum genet spread was 0.59 m suggesting that genets can be larger than the sampled 0.25 m2 plots. Spatial autocorrelation analysis found a lack of spatial genetic structure at short distances and significant structure at large distances within populations. Due to the occurrence of multiple genets within each population, the limited spread of genets, and a localized genetic structure, conservation activities should focus on the maintenance of multiple populations throughout the species range.


Ambrosia pumila Asteraceae Clonality Conservation genetics RAPDs 


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The authors thank Jennifer Cruse-Sanders, Hester Bell, and two anonymous reviewers for comments on the manuscript, Gary Wallace for advice on population localities and the basic biology of A. pumila, John Barone and Paul Seeley (Mission Trails Regional Park), Val Urban (US Fish and Wildlife Service), and Debbie Waldecker (CalTrans) for field and permitting assistance. This research was funded by contract from the California Department of Fish and Game (#S0250014) and Rancho Santa Ana Botanic Garden. Collections were made under Federal Fish and Wildlife Permit TE009018-1 and Fish and Wildlife Service Special Use Permit 11720-03007.


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Copyright information

© Springer Science+Business Media B.V. 2006

Authors and Affiliations

  1. 1.Department of BiologyUniversity of South DakotaVermillionUSA
  2. 2.Rancho Santa Ana Botanic Garden, Department of BotanyClaremont Graduate UniversityClaremontUSA

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