Skip to main content
Log in

Spectral Study of Interactions of 4,8,4′-Trimethylpsoralen and 4,4′-Dimethylangelicin Dyes with DNA

  • Published:
Biochemistry (Moscow) Aims and scope Submit manuscript

Abstract

Absorption and fluorescence spectra for six new synthetic dyes of 4,8,4′-trimethylpsoralen and 4,4′-dimethylangelicin derivatives containing various terminal substituents at 5′-position have been investigated in different environments using a wide range of the DNA/ligand concentrations. Various spectral and binding characteristics of the DNA-ligand systems have been determined. General principles characterizing mechanisms responsible for changes in the fluorescent properties of nucleotide-specific dyes have been proposed; they take into consideration chemical structure of the dyes, properties of the environment, and degree of sorption on substrate.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

REFERENCES

  1. Denison, L., Haigh, A., D’Cunha, G., and Martin, R. F. (1992) Int. J. Radiat. Biol., 61, 69–81.

    PubMed  Google Scholar 

  2. Gazzard, B. G. (1989) J. Antimicrob. Chemother., 23, 67–75.

    PubMed  Google Scholar 

  3. Van Iperen, H. P., and van Henegouwen, G. M. J. B. (1997) J. Photochem. Photobiol., B: Biology, 39, 99–109.

    Google Scholar 

  4. Baguley, B. C. (1982) Mol. Cell. Biochem., 43, 167–181.

    Article  PubMed  Google Scholar 

  5. Osashi, M., and Oki, T. (1996) Expert. Opin. Therp. Patents, 6, 1285–1294.

    Google Scholar 

  6. Bartulewicz, D., Markowska, A., Wolczynski, S., Dabrowska, M., and Rozanski, A. (2000) Acta Biochim. Polonica, 47, 23–35.

    Google Scholar 

  7. Morgan, A. R., Lee, J. S., Pulleyblank, D. E., Murray, N. L., and Evans, D. H. (1979) Nucleic Acids Res., 7, 547–595.

    PubMed  Google Scholar 

  8. Darzynkiewicz, Z., Traganos, F., Kapuscinski, J., Staiano-Coico, L., and Melamed, M. R. (1984) Cytometry, 5, 355–363.

    Article  PubMed  Google Scholar 

  9. Zimmer, C., and Wahnert, U. (1986) Progr. Biophys. Mol. Biol., 47, 31–112.

    Article  Google Scholar 

  10. Campejohn, R. S., Macarthey, J. C., and Morris, R. W. (1989) Cytometry, 10, 410–416.

    Article  PubMed  Google Scholar 

  11. Ivanov, S. D. (1992) Postradiation Reaction of Blood Leukocyte DNA. Detection, Characteristic Features and Prognostic Values: Doctoral dissertation [in Russian], TsNIRRI, Leningrad.

    Google Scholar 

  12. Ivanov, S. D., Korytova, L. I., Yamshanov, V. A., Ilyn, N. V., and Sibirtsev, V. S. (1997) J. Exp. Clin. Cancer Res., 16, 183–188.

    PubMed  Google Scholar 

  13. Pjura, P. E., Grzeskowiuk, K., and Dickerson, R. E. (1987) J. Mol. Biol., 197, 257–271.

    Article  PubMed  Google Scholar 

  14. Pelton, J. C., and Wemmer, D. E. (1990) J. Am. Chem. Soc., 112, 1393–1399.

    Article  Google Scholar 

  15. Eriksson, S., Kim, S. K., Kubista, M., and Norden, B. (1993) Biochemistry, 32, 2987–2998.

    Article  PubMed  Google Scholar 

  16. Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (2001) Russ. J. Bioorg. Chem., 27, 57–65.

    Article  Google Scholar 

  17. Muller, W., and Grothers, D. M. (1975) Eur. J. Biochem., 54, 267–277.

    Article  PubMed  Google Scholar 

  18. Muller, W., Bunemann, H., and Dattagupta, N. (1975) Eur. J. Biochem., 54, 279–291.

    Article  PubMed  Google Scholar 

  19. Miller, K. J., and Newlin, D. D. (1982) Biopolymers, 21, 633–652.

    Article  PubMed  Google Scholar 

  20. Tomosaka, H., Omata, S., Hasegawa, E., and Anzai, K. (1997) Biosci. Biotech. Biochem., 61, 1121–1125.

    Google Scholar 

  21. Guiotto, A., Rodighiero, P., Manzini, G., Pastorini, F., Bordin, F., Baccichetti, F., Carlassare, D., Vedaldi, D., Dall’Acqua, F., Tamaro, M., Recchia, G., and Cristofolini, M. (1984) J. Med. Chem., 27, 959–967.

    Article  PubMed  Google Scholar 

  22. Gia, O., Anselmo, A., Consoni, M. T., Antonello, C., Uriarte, E., and Caffieri, S. (1996) J. Med. Chem., 39, 4489–4496.

    Article  PubMed  Google Scholar 

  23. Leonov, A. A., Sergiev, P. V., Dontsova, O. A., and Bogdanov, A. A. (1993) Mol. Biol. (Moscow), 33, 1063–1073.

    Google Scholar 

  24. Georgiev, G. P. (1969) Annu. Rev. Genet., 3, 155–205.

    Article  Google Scholar 

  25. Barcellona, M. L., Favilla, R., von Berger, J., Avitabile, M., Ragusa, N., and Masotti, L. (1986) Arch. Biochem. Biophys., 250, 48–53.

    Article  PubMed  Google Scholar 

  26. Tolmachev, A. Yu. (2000) Study of Base-Catalyzed Cyclization Reactions of Hydroxy and ortho-Acyl Coumarins: Candidate’s dissertation [in Russian], RKhTU, Moscow.

    Google Scholar 

  27. Sibirtsev, V. S., Tolmachev, A. Yu., Suslov, V. V., Garabadjiu, A. V., and Traven, V. F. (2003) Russ. J. Org. Chem., 39, 881–889.

    Article  Google Scholar 

  28. Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1997) Russ. J. Bioorg. Chem., 23, 857–866.

    Google Scholar 

  29. Scatchard, G. (1949) Ann. N. Y. Acad. Sci., 51, 660–672.

    Google Scholar 

  30. Krasovitsky, B. M., and Bolotin, B. M. (1984) Organic Luminophores [in Russian], Khimiya, Moscow.

    Google Scholar 

  31. Dyakonov, V. P. (1987) Reference Book on Algorithms and Programs on Basic Language for Personal Computers [in Russian], Nauka, Fizmatgiz, Moscow.

    Google Scholar 

  32. Shishkin, E. V., and Plis, L. I. (1996) Curves and Surfaces on the Computer Screen. Handbook on Splines for Users [in Russian], Dialog MIFI, Moscow.

    Google Scholar 

  33. Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1994) Russ. J. Bioorg. Chem., 20, 630–658.

    Google Scholar 

  34. Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1995) Russ. J. Bioorg. Chem., 21, 711–716.

    Google Scholar 

  35. Ivanov, S. D., Kvitko, I. Ya., Rtishchev, N. I., Fomina, E. I., and Nagorskaya, L. P. (1989) Russ. J. Bioorg. Chem., 15, 628–635.

    Google Scholar 

  36. Sibirtsev, V. S., Glibin, E. N., and Ivanov, S. D. (2000) Russ. J. Org. Chem., 36, 1812–1818.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to V. S. Sibirtsev.

Additional information

__________

Translated from Biokhimiya, Vol. 70, No. 7, 2005, pp. 995–1007.

Original Russian Text Copyright © 2005 by Sibirtsev, Tolmachev, Kovaleva, Garabadzhiu, Traven.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Sibirtsev, V.S., Tolmachev, A.Y., Kovaleva, M.V. et al. Spectral Study of Interactions of 4,8,4′-Trimethylpsoralen and 4,4′-Dimethylangelicin Dyes with DNA. Biochemistry (Moscow) 70, 822–832 (2005). https://doi.org/10.1007/s10541-005-0190-4

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10541-005-0190-4

Key words

Navigation