Abstract
Absorption and fluorescence spectra for six new synthetic dyes of 4,8,4′-trimethylpsoralen and 4,4′-dimethylangelicin derivatives containing various terminal substituents at 5′-position have been investigated in different environments using a wide range of the DNA/ligand concentrations. Various spectral and binding characteristics of the DNA-ligand systems have been determined. General principles characterizing mechanisms responsible for changes in the fluorescent properties of nucleotide-specific dyes have been proposed; they take into consideration chemical structure of the dyes, properties of the environment, and degree of sorption on substrate.
Similar content being viewed by others
REFERENCES
Denison, L., Haigh, A., D’Cunha, G., and Martin, R. F. (1992) Int. J. Radiat. Biol., 61, 69–81.
Gazzard, B. G. (1989) J. Antimicrob. Chemother., 23, 67–75.
Van Iperen, H. P., and van Henegouwen, G. M. J. B. (1997) J. Photochem. Photobiol., B: Biology, 39, 99–109.
Baguley, B. C. (1982) Mol. Cell. Biochem., 43, 167–181.
Osashi, M., and Oki, T. (1996) Expert. Opin. Therp. Patents, 6, 1285–1294.
Bartulewicz, D., Markowska, A., Wolczynski, S., Dabrowska, M., and Rozanski, A. (2000) Acta Biochim. Polonica, 47, 23–35.
Morgan, A. R., Lee, J. S., Pulleyblank, D. E., Murray, N. L., and Evans, D. H. (1979) Nucleic Acids Res., 7, 547–595.
Darzynkiewicz, Z., Traganos, F., Kapuscinski, J., Staiano-Coico, L., and Melamed, M. R. (1984) Cytometry, 5, 355–363.
Zimmer, C., and Wahnert, U. (1986) Progr. Biophys. Mol. Biol., 47, 31–112.
Campejohn, R. S., Macarthey, J. C., and Morris, R. W. (1989) Cytometry, 10, 410–416.
Ivanov, S. D. (1992) Postradiation Reaction of Blood Leukocyte DNA. Detection, Characteristic Features and Prognostic Values: Doctoral dissertation [in Russian], TsNIRRI, Leningrad.
Ivanov, S. D., Korytova, L. I., Yamshanov, V. A., Ilyn, N. V., and Sibirtsev, V. S. (1997) J. Exp. Clin. Cancer Res., 16, 183–188.
Pjura, P. E., Grzeskowiuk, K., and Dickerson, R. E. (1987) J. Mol. Biol., 197, 257–271.
Pelton, J. C., and Wemmer, D. E. (1990) J. Am. Chem. Soc., 112, 1393–1399.
Eriksson, S., Kim, S. K., Kubista, M., and Norden, B. (1993) Biochemistry, 32, 2987–2998.
Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (2001) Russ. J. Bioorg. Chem., 27, 57–65.
Muller, W., and Grothers, D. M. (1975) Eur. J. Biochem., 54, 267–277.
Muller, W., Bunemann, H., and Dattagupta, N. (1975) Eur. J. Biochem., 54, 279–291.
Miller, K. J., and Newlin, D. D. (1982) Biopolymers, 21, 633–652.
Tomosaka, H., Omata, S., Hasegawa, E., and Anzai, K. (1997) Biosci. Biotech. Biochem., 61, 1121–1125.
Guiotto, A., Rodighiero, P., Manzini, G., Pastorini, F., Bordin, F., Baccichetti, F., Carlassare, D., Vedaldi, D., Dall’Acqua, F., Tamaro, M., Recchia, G., and Cristofolini, M. (1984) J. Med. Chem., 27, 959–967.
Gia, O., Anselmo, A., Consoni, M. T., Antonello, C., Uriarte, E., and Caffieri, S. (1996) J. Med. Chem., 39, 4489–4496.
Leonov, A. A., Sergiev, P. V., Dontsova, O. A., and Bogdanov, A. A. (1993) Mol. Biol. (Moscow), 33, 1063–1073.
Georgiev, G. P. (1969) Annu. Rev. Genet., 3, 155–205.
Barcellona, M. L., Favilla, R., von Berger, J., Avitabile, M., Ragusa, N., and Masotti, L. (1986) Arch. Biochem. Biophys., 250, 48–53.
Tolmachev, A. Yu. (2000) Study of Base-Catalyzed Cyclization Reactions of Hydroxy and ortho-Acyl Coumarins: Candidate’s dissertation [in Russian], RKhTU, Moscow.
Sibirtsev, V. S., Tolmachev, A. Yu., Suslov, V. V., Garabadjiu, A. V., and Traven, V. F. (2003) Russ. J. Org. Chem., 39, 881–889.
Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1997) Russ. J. Bioorg. Chem., 23, 857–866.
Scatchard, G. (1949) Ann. N. Y. Acad. Sci., 51, 660–672.
Krasovitsky, B. M., and Bolotin, B. M. (1984) Organic Luminophores [in Russian], Khimiya, Moscow.
Dyakonov, V. P. (1987) Reference Book on Algorithms and Programs on Basic Language for Personal Computers [in Russian], Nauka, Fizmatgiz, Moscow.
Shishkin, E. V., and Plis, L. I. (1996) Curves and Surfaces on the Computer Screen. Handbook on Splines for Users [in Russian], Dialog MIFI, Moscow.
Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1994) Russ. J. Bioorg. Chem., 20, 630–658.
Sibirtsev, V. S., Garabadjiu, A. V., and Ivanov, S. D. (1995) Russ. J. Bioorg. Chem., 21, 711–716.
Ivanov, S. D., Kvitko, I. Ya., Rtishchev, N. I., Fomina, E. I., and Nagorskaya, L. P. (1989) Russ. J. Bioorg. Chem., 15, 628–635.
Sibirtsev, V. S., Glibin, E. N., and Ivanov, S. D. (2000) Russ. J. Org. Chem., 36, 1812–1818.
Author information
Authors and Affiliations
Corresponding author
Additional information
__________
Translated from Biokhimiya, Vol. 70, No. 7, 2005, pp. 995–1007.
Original Russian Text Copyright © 2005 by Sibirtsev, Tolmachev, Kovaleva, Garabadzhiu, Traven.
Rights and permissions
About this article
Cite this article
Sibirtsev, V.S., Tolmachev, A.Y., Kovaleva, M.V. et al. Spectral Study of Interactions of 4,8,4′-Trimethylpsoralen and 4,4′-Dimethylangelicin Dyes with DNA. Biochemistry (Moscow) 70, 822–832 (2005). https://doi.org/10.1007/s10541-005-0190-4
Received:
Revised:
Issue Date:
DOI: https://doi.org/10.1007/s10541-005-0190-4