Abstract
In China, the tobamovirus that infects oilseed rape has been misdiagnosed as Tobacco mosaic virus (TMV) based on its morphological similarity and serological relatedness. Recently, a tobamovirus has been isolated from oilseed rape in China, which we named Youcai mosaic virus Br (YoMV-Br), according to its biological and molecular characteristics. It had strong infectivity to Cruciferae but less to Solanaceae, Leguminosae, and Cucurbitaceae, and its virion morphology was consistent with that of the tobamoviruses. At high concentrations, it serologically cross reacted with TMV antiserum. The 3′ terminal sequence (2,283 nucleotides) of YoMV-Br was determined, including the 3′ noncoding region, the CP and MP genes, and the C-terminal part of the replicase gene. Between the MP and CP genes, 77 nucleotides overlapped. Compared with homologous regions of 21 recognized species of Tobamovirus, YoMV-Br had a much higher identity to crucifer species than to other tobamoviruses. Phylogenetic analysis demonstrated that YoMV-Br was closely related to the YoMV cluster of tobamoviruses and distantly to TMV, so that they likely belong to different strains of the same species.
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Adkins S, Kamenova I, Achor D, Lewandowski DJ (2003) Biological and molecular characterization of a novel tobamovirus with a unique host range. Plant Dis 87(10):1190–1196
Adkins S, Kamenova I, Rosskopf EN, Lewandowski DJ (2007) Identification and characterization of a novel tobamovirus from Tropical Soda Apple in Florida. Plant Dis 91(3):287–293
Aguilar I, Sánchez F, Martín A, Martínez-Herrera D, Ponz F (1996) Nucleotide sequence of Chinese rape mosaic virus (oilseed rape mosaic virus), a crucifer tobamovirus infectious on Arabidopsis thaliana. Plant Mol Biol 30:191–197
Antignus Y, Wang Y, Pearlsman M, Lachman O, Lavi N, Gal-On A (2001) Biological and molecular characterization of a new cucurbit-infecting tobamovirus. Virology 91(6):565–571
Brako L, Rossman AY, Farr DF (1995) Scientific and common names of 7,000 vascular plants in the United States. American Phytopathological Society, St. Paul, MN
Chessin M, Juretic N, Milicic D, Perryman J, Giri L (1980) A distinct strain of Ribgrass mosaic virus from Montana, USA. Phytopathol Z 97:295–301
Fraile A, Aranda MA, Garcia-Arenal F (1995) Evolution of the tobamoviruses. In: Gibbs A, Calisher CH, Garcia-Arenal F (eds) Molecular basis of viral evolution. Cambridge University Press, Cambridge, pp 338–350
Fukuda M, Meshi T, Okada Y, Takebe I (1981) Correlation between particle multiplicity and location on virion RNA of the assembly initiation site for viruses of the tobacco mosaic virus group. Proc Natl Acad Sci U S A 78:4231–4235
Gibbs A (1986) Tobamovirus classification. In: van Regenmortel MHV, Fraenkel-Conrat H (eds) The plant viruses, vol 2. Plenum Press, New York, pp 168–180
Gibbs A (1999) Evolution and origins of tobamoviruses. Philos Trans R Soc Lond 354:593–602
Hajduch M, Casteel JE, Hurrelmeyer KE, Song Z, Agrawal GK, Thelen JJ (2006) Proteomic analysis of seed filling in Brassica napus: developmental characterization of metabolic isozymes using high-resolution two-dimensional gel electrophoresis. Plant Physiol 141:32–46
Harrison BD, Wilson TMA (1999) Tobacco mosaic virus: pioneering research for a century. Philos Trans R Soc Lond B 354:517–685
Heinze C, Lesemann DE, Ilmberger N, Willingmann P, Adam G (2006) The phylogenetic structure of the cluster of tobamovirus species serologically related to Ribgrass mosaic virus (RMV) and the sequence of Strepocarpus flower break virus (SFBV). Arch Virol 151:763–774
Hiraku O, Jun-ichi S, Kenji K, Mitsuru O, Yuko T, Kaoru H, Yukihisa I, Masamichi N, Alexander VK, Shin-ichi M, Toru I (2007) Molecular and serological characterization of Cucumber mottle virus, a new cucurbit-infecting tobamo-like virus. Plant Dis 91(12):1574–1578
Holmes FO (1941) A distinctive strain of tobacco-mosaic virus from Plantago. Phytopathology 31:1089–1098
Ilmberger N, Willingmann P, Adam G, Heinze C (2007) A subgroup 1 Tobamovirus isolated from Brugmansia sp. and its detection by RT-PCR. J Phytopathol 155:326–332
Ju YY, Byoung EM, Jang KC, Ki HR (2002) Genome structure and production of biologically active in vitro transcripts of cucurbit-infecting Zucchini green mottle mosaic virus. Phytopathology 92(2):156–163
Knapp E, Lewandowski DJ (2001) Tobacco mosaic virus, not just a single component virus anymore. Mol Plant Pathol 2(3):117–123
Lartey RT, Lane LC, Melcher U (1994) Electron microscopic and molecular characterization of Turnip vein-clearing virus. Arch Virol 138:287–298
Lartey RT, Voss TC, Melcher UK (1995) Completion of a cDNA sequence from a tobamovirus pathogenic to crucifers. Gene 166:321–322
Lartey RT, Voss TC, Melcher UK (1996) Tobamovirus evolution: gene overlaps, recombination, and taxonomic implications. Mol Biol Evol 13(10):1327–1338
Lewandowski DJ (2005a) Index of viruses: Tobamovirus. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy. Classification and nomenclature of viruses, 8th Report of the International Committee on Taxonomy of Viruses. Elsevier/Academic Press, San Diego, pp 1259
Lewandowski DJ (2005b) Genus Tobamovirus. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy. 8th Report of the International Committee on Taxonomy of Viruses. Elsevier, Amsterdam, pp 1009–1014
Li LL (1995) Oilseed rape virus diseases. Crop diseases and pests of China. Chinese Agricultural Publishing Company, Beijing, pp 869–873
Min BE, Chung BN, Kim MJ, Ha JH, Lee BY, Ryu KH (2006) Cactus mild mottle virus is a new cactus-infecting tobamovirus. Arch Virol 151:13–21
Palukaitis P, Randles JW, Ying-tuan T (1981) Taxonomy of several tobamoviruses from China as determined by molecular hybridization analysis with complementary DNA. Intervirology 16(3):136–141
Randles JW, Palukaitis P, Dacies C (1981) Natural distribution, spread, and variation, in the tobacco mosaic virus infecting Nicotiana glauca in Australia. Ann Appl Biol 98:109–119
Sheng FJ, Lu GC, Li DB (1983) An isolate of Ribgrass mosaic virus infecting Brassica rapa in the suburbia of Hangzhou. J Zhejiang Agric Univ 9(1):39–46
Shimamoto I, Sonoda S, Vazquez P, Minaka N, Nishiguchi M (1998) Nucleotide sequence analysis of the 3′ terminal region of a wasabi strain of crucifer tobamovirus genomic RNA: subgrouping of crucifer tobamoviruses. Arch Virol 143(9):1801–1813
USDA, NRCS (2001) The plants database, version 3.1. National Plant Data Center, Baton Rouge, LA. Published online
van Regenmortel MHV (1975) Antigenic relationships between strains of Tobacco mosaic virus. Virology 64:415–420
Van Regenmortel MHV, Fauquet CM, Bishop DHL (eds) (2000) Virus taxonomy. Seventh report of the International Committee on Taxonomy of Viruses. Academic Press, San Diego
Wang H, Culver JN, Stubbs GRT (1997) Structure of Ribgrass mosaic virus at 2.9 a resolution: evolution and taxonomy of tobamoviruses. J Mol Biol 269:769–779
Wang SY, Li LL, Fang XP (1990) Serological identification and the survey of oilseed rape virus diseases in the south of China. Plant Prot 16(6):2–4
Wetter C (1986) Ribgrass mosaic virus. In: van Regenmortel MHV, Fraenkel-Conrat H (eds) The plant viruses, vol 2. Plenum Press, New York, pp 221–232
Wetter C, Conti M (1988) Pepper mild mottle virus. CMI/AAB descriptions of plant viruses, no. 330
Yamanaka T, Komatani H, Meshi T (1998) Complete nucleotide sequence of the genomic RNA of Tobacco mosaic virus strain Cg. Virus Genes 16(2):173–176
Zhu H, Hong J, Ye R, Chen J, Yu S, Adams MJ (2001) Sequence analysis shows that Ribgrass mosaic virus Shanghai isolate (RMV-Sh) is closely related to Youcai mosaic virus. Arch Virol 146(6):1231–1238
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Cai, L., Chen, K., Zhang, X. et al. Biological and Molecular Characterization of a Crucifer Tobamovirus Infecting Oilseed Rape. Biochem Genet 47, 451–461 (2009). https://doi.org/10.1007/s10528-009-9244-4
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DOI: https://doi.org/10.1007/s10528-009-9244-4