Skip to main content
Log in

Comparative analysis of otolith morphology in three species of Scomber

  • Full Paper
  • Published:
Ichthyological Research Aims and scope Submit manuscript

Abstract

Geometric morphometrics is a quick and reliable approach to differentiate fish stocks based on the variation of otolith shapes. In this study, morphometric analysis of otolith shapes was used to differentiate three species of Scomber. The sagittae morphology of S. scombrus otolith is totally different from that of S. japonicus and S. australasicus. Multivariate analysis consistently showed that S. japonicus was morphologically similar to S. australasicus, whereas a significant difference in otolith shapes was detected between S. scombrus and other two species of Scomber. The rostrum, antirostrum, excisural notch and dorsal-posterior margin of the otolith reflect the main variations between the three species of Scomber. Shape indices and Fourier coefficients were used to discriminate fish species using analysis of variance and Fisher discriminant analysis. The shape indices successfully differentiated 100%, 95.7% and 96.4% of otoliths in S. japonicus, S. australasicus and S. scombrus, respectively, while the Fourier coefficients only discriminated 70.0%, 61.9% and 91.3% of the sagittae in S. japonicus, S. australasicus and S. scombrus. This study indicates that the shape analysis on the sagittae morphometrics of otoliths is a better method to differentiate species of Scomber.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • Adams, DC, Rohlf FJ, Slice DE (2004) Geometric morphometrics: Ten years of progress following the ‘revolution’. Ital J Zool 71:5‒16

  • Bani A, Poursaeid S, Tuset VM (2013) Comparative morphology of the sagittal otolith in three species of south Caspian gobies. J Fish Biol 82: 1321‒1332

  • Begg GA, Waldman JR (1999) An holistic approach to fish stock identification. Fish Res 43:35‒44

  • Begg GA, Overholtz WJ, Munroe NJ (2001) The use of internal otolith morphometrics for identification of haddock (Melanogrammus aeglefinus) stocks on Georges Bank. Fish Bull 99:1‒14

  • Bergenius MAJ, Begg GA, Mapstone BD (2006) The use of otolith morphology to indicate the stock structure of common coral trout. Fish Bull 104:498‒511

  • Bird JL, Eppler DT, Checkley DM (1986) Comparisons of herring otoliths using Fourier series shape analysis. Can J Fish Aquat Sci 43:1228‒1234

  • Bliss CI (1970) Statistics in biology. Vol 2. McGraw-Hill Book Company, New York and London

  • Bolles KL, Begg GA (2000) Distinction between silver hake (Merluccius bilinearis) stocks in U.S. waters of the northwest Atlantic based on whole otolith morphometrics. Fish Bull 98:451‒462

  • Bose AP, Adragna JB, Balshine S (2017) Otolith morphology varies between populations, sexes and male alternative reproductive tactics in a vocal toadfish Porichthys notatus. J Fish Biol 90:311‒325

  • Cadrin SX, Friedland KD (1999) The utility of image processing techniques for morphometric analysis and stock identification. Fish Res 43:129‒139

  • Camacho J (1995) Análisis multivariado con SPSS/PC+. EUB, Barcelona. 348.

  • Campana SE (2004) Photographic Atlas of Fish Otoliths of the Northwest Atlantic Ocean Canadian Special Publication of Fisheries and Aquatic Sciences No 133. NRC Research press, Ottawa

  • Campana SE, Casselman JM (1993) Stock discrimination using otolith shape analysis. Can J Fish Aquat Sci 50:1062‒1083

  • Castonguay M, Simard P, Gagnon P (1991) Usefulness of Fourier analysis of otolith shape for Atlantic mackerel (Scomber scombrus) stock discrimination. Can J Fish Aquat Sci 48:7

  • Cheng J (2013) Molecular phylogeography of two Scomber species in Northwestern Pacific. Ocean University of China, Qing Dao

  • Cheng J, Gao TX, Miao ZQ, Yanagimoto T (2011) Molecular phylogeny and evolution of genus Scomber (Teleostei: Scombridae) based on mitochondrial and nuclear DNA sequences. Chin J Oceanol Limn 29:297‒310

  • Collette BB (1986) Scombridae (including Thunnidae, Scomberomoridae, Gasterochismatidae and Sardidae). p. 981-997. In P.J.P. Whitehead, M.-L. Bauchot, J.-C. Hureau, J. Nielsen and E. Tortonese (eds) Fishes of the north-eastern Atlantic and the Mediterranean, Vol 2. UNESCO, Paris

  • Collette BB and Nauen CE (1983) FAO Species Catalogue. Vol. 2. Scombrids of the world. An annotated and illustrated catalogue of tunas, mackerels, bonitos and related species known to date. Rome: FAO. FAO Fish Synop 125:137

  • DeVries DA, Grimes CB, Prager MH (2002) Using otolith shape analysis to distinguish eastern Gulf of Mexico and Atlantic Ocean stocks of king mackerel. Fish Res 57:51‒62

  • Duarte-Neto P, Lessa Rn, Stosic B, Morize E (2008) The use of sagittal otoliths in discriminating stocks of common dolphinfish (Coryphaena hippurus) off northeastern Brazil using multishape descriptors. ICES J Mar Sci 65:1144‒1152

  • Falini G, Fermani S, Vanzo S, Miletic M, Zaffino G (2005) Influence on the Formation of Aragonite or Vaterite by Otolith Macromolecules. Eur J Inorg Chem 2005:162‒167

  • Fuji T, Kasai A, Ueno M, Yamashita Y (2014) Growth and migration patterns of juvenile temperate seabass Lateolabrax japonicus in the Yura River estuary, Japan—combination of stable isotope ratio and otolith microstructure analyses. Environ Biol Fishes 97:1221‒1232

  • Gaga, FJ (1993) Morphology of the saccular otoliths of six species of lanternfishes of the Genus Symbolophorus (Pisces: Myctophidae). Bull Mar Sci 52: 949‒960

  • Gagliano M, McCormick MI (2004) Feeding history influences otolith shape in tropical fish. Mar Ecol Prog Ser 278:291‒296

  • Gauldie RW (1988) Function, form and time-keeping properties of fish otoliths. Comp Biochem Physiol 91:395–402

  • Goldstein M, Dillon WR (1978) Discrete discriminant analysis. Wiley, New York

  • Hale R, Swearer SE (2008) Otolith microstructural and microchemical changes associated with settlement in the diadromous fish Galaxias maculatus. Mar Ecol Prog Ser 354: 229-234

  • Humphreys WF, Shiao JC, Iizuka Y, Tzeng WN (2006) Can Otolith Microchemistry Reveal Whether the Blind Cave Gudgeon, Milyeringa veritas (Eleotridae), is Diadromous within a Subterranean Estuary? Environ Biol Fishes 75:439‒453

  • Infante C, Crespo A, Zuasti E, Ponce M, Pérez L, Funes V (2006) PCR-based methodology for the authentication of the Atlantic mackerel Scomber scombrus in commercial canned products. Food Res Int 39:1023‒1028

  • Jackson DA (1993) Stopping rules in principal components analysis: a comparison of heuristical and statistical approaches. Ecology 74:2204‒2214

  • Jawad LA, Hoedemakers K, Ibáñez AL, Ahmed YA, Abu El-Regal MA, Mehanna SF (2017) Morphology study of the otoliths of the parrotfish, Chlorurus sordidus (Forsskål, 1775) and Hipposcarus harid (Forsskål, 1775) from the Red Sea coast of Egypt (Family: Scaridae). J Mar Biol Assoc U K, doi:10.1017/S0025315416002034

  • Kelly BC (2007) Some aspects of measurement error in linear regression of astronomical data. Astrophys J 665:1489

  • Lagardère F, Chaumillon G, Amara R., Heineman G, Lago JM (1995) Examination of otolith morphology and microstructure using laser scanning microscopy. In: Recent developments in fish Otolith research. D. H. Secor, J. M. Dean, S. E. Campana (Eds). University of South Carolina Press, Columbia, pp 7–26

  • Lestrel PE (1997) Introduction and overview of Fourier descriptors. In: Lestrel PE, editor. Fourier descriptors and their applications in biology. Cambridge University Press, New York, pp 22–44

  • Lombarte A, Lleonart J (1993) Otolith size changes related with body growth, habitat depth and temperature. Environ Biol Fishes 37: 297–306

  • Longmore C, Fogarty K, Neat F, Brophy D, Trueman C, Milton A (2010) A comparison of otolith microchemistry and otolith shape analysis for the study of spatial variation in a deep-sea teleost, Coryphaenoides rupestris. Environ Biol Fishes 89:591–605

  • Matsui T (1967) Review of the mackerel genera Scomber and Rastrelliger with description of a new species of Rastrelliger. Copeia 1967:71–83

  • May JL and Maxwell JGH (1986) Trawl fish from temperate waters of Australia. CSIRO Division of Fisheries Research, Tasmania. 492 p

  • Nakabō T (2002) Fishes of Japan: with pictorial keys to the species, Vol 1. Tokai University Press, Tokyo

  • Neilson ME, Stepien CA (2009) Escape from the Ponto-Caspian: evolution and biogeography of an endemic goby species flock (Benthophilinae: Gobiidae: Teleostei). Mol Phylogenet Evol 52:84–102

  • Oliveira AM, Farina M, Ludka IP, Kachar B (1996) Vaterite, calcite, and aragonite in the otoliths of three species of piranha. Naturwissenschaften 83:133–135

  • Ponton D (2006) Is geometric morphometrics efficient for comparing otolith shape of different fish species? J Morphol 267:750–757

  • Pontual H, Prouzet P (1987) Atlantic salmon, Salmo salar L., stock discrimination by scale-shape analysis. Aquacult Fish Manage 18: 277-289

  • Russ JC (1990) Computer-Assisted Microscopy: the measurement and analysis of images. Plenum Press, New York

  • Sassa C, Tsukamoto Y (2010) Distribution and growth of Scomber japonicus and S. australasicus larvae in the southern East China Sea in response to oceanographic conditions. Mar Ecol Prog Ser 419:185–199

  • Schulz-Mirbach T, Ladich F, Riesch R, Plath M (2010) Otolith morphology and hearing abilities in cave- and surface-dwelling ecotypes of the Atlantic molly, Poecilia mexicana (Teleostei: Poeciliidae). Hear Res 267:137–148

  • Scoles DR, Collette BB, Graves JE (1998) Global phylogeography of mackerels of the genus Scomber. Fish Bull 96:823–842

  • Tracey SR, Lyle JM, Duhamel G (2006) Application of elliptical Fourier analysis of otolith form as a tool for stock identification. Fish Res 77:138–147

  • Tuset VM, Lozano IJ, Gonzalez JA, Pertusa JF, Garcia-Diaz MM (2003) Shape indices to identify regional differences in otolith morphology of comber, Serranus cabrilla (L., 1758). J Appl Ichthyol 19:88–93

  • Vasconcelos J, Dias MA, Faria G (2011) Age and growth of the Atlantic chub mackerel Scomber colias Gmelin, 1789 off Madeira Island. Life Mar Sci 28:57–70

  • Vignon M, Morat F (2010) Environmental and genetic determinant of otolith shape revealed by a non-indigenous tropical fish. Mar Ecol Prog Ser 411:231–241

Download references

Acknowledgements

This research was funded by the National Natural Science Foundation of China (No. 41776171), International Science and Technology Cooperation Program of China (No. 2015DFR30450), Public Science and Technology Research Funds Projects of Ocean (No. 201505025), Chongqing Research Program of Basic Research and Frontier Technology (No. cstc2016jcyjA0327), Genetic Resources Conservation Grant (Fisheries) from the Ministry of Agriculture of the P. R. China (No. 171721301354052181) and Ecological Fishery Industrial Technology System Project from Chongqing Municipal Agriculture Commission (Grant to YL). Tao He is grateful for the support of the China Scholarship Council (201508505111) with the visiting scholar programs to Flinders University. All procedures performed complied with the ethical standards and guidelines of Zhejiang Ocean University of China.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tian-xiang Gao.

Electronic supplementary material

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

He, T., Cheng, J., Qin, Jg. et al. Comparative analysis of otolith morphology in three species of Scomber . Ichthyol Res 65, 192–201 (2018). https://doi.org/10.1007/s10228-017-0605-4

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10228-017-0605-4

Keywords

Navigation