Skip to main content
Log in

Characterization of a FeMo cofactor-deficient MoFe protein from anifE-deleted strain (DJ35) ofAzotobacter vinelandii

  • Articles
  • Published:
Chinese Science Bulletin

Abstract

A MoFe protein (ΔnifE Avl) with a purity of ∼80% was purified from a nifE-deleted mutant ofAzotobacter vinelandii DJ35. Compared with MoFe protein purified from wild-type strain OP (OP Av1), ΔnifE Av1 had the same subunits composition, and had immune reaction with antibody to OP Av1, but its relative mobility in anaerobic native polyacrylamide gel electrophoresis (PAGE) was a little larger than that of OP Av1. Metal analysis showed that Mo and Fe contents of ΔnifE Av1 both apparently decreased. When complemented with OP Fe protein, ΔnifE Av1 had no C2H2-reduction activity, but it could bein vitro activated by FeMoco extracted from OP Av1. The circular dichroism (CD) spectrum of ΔnifE Av1 at ∼450 nm was similar to that of OP Av1, while the EPR signal at g∼3.7 was absolutely silent, and the signal intensities at g∼=4.3 and 2.0 decreased by 75% and 50%, respectively. The results indicated that ΔnifE Av1 purified from DJ35 was a FeMoco-deficient but P-cluster-containing MoFe protein.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Howard, J. B., Rees, D. C., Structural basis of biological nitrogen fixation, Chem. Rev., 1996, 96: 2965–2982.

    Article  Google Scholar 

  2. Kim, J., Rees, D. C., Structural models for the metal centers in the nitrogenase molybdenum-iron protein, Science, 1992, 257: 1677–1682.

    Article  Google Scholar 

  3. Smith, B. E., Eady, R. R., Metalloclusters of the nitrogenases, Eur. J. Biochem., 1992, 205: 1–15.

    Article  Google Scholar 

  4. Burgess, B. K., The iron-molybdenum cofactor of nitrogenase, Chem. Rev., 1990, 90: 1377–1406.

    Article  Google Scholar 

  5. Tal, S., Chun, T. W., Gavini, N. et al., The ΔniB (or ΔnifE FeMo cofactor-deficient MoFe protein is different from the ΔnifH protein, J. Biol. Chem., 1991, 266: 10654–10657.

    Google Scholar 

  6. Gavini, N., Ma, L., Watt, G. et al., Purification and characterization of a FeMo cofactor-deficient MoFe protein, Biochemistry, 1994, 33: 11842–11849.

    Article  Google Scholar 

  7. Ribbe, M. W., Hu, Y., Guo, M. et al., The FeMo-co-deficient MoFe protein produced by anifH deletion strain ofAzotobacter vinelandii shows unusual P-cluster features, J. Biol. Chem., 2002, 277: 23469–23476.

    Article  Google Scholar 

  8. Schmid, B., Ribbe, M. W., Einsle, O. et al., Structure of a cofactor-deficient nitrogenase MoFe protein, Science, 2002, 296: 352–356.

    Article  Google Scholar 

  9. Allen, R. M., Chatterjee, R., Ludden, P. W. et al., Incorporation of iron and sulfur from NifB cofactor into the iron-molybdenum cofactor of nitrogenase, J. Biol. Chem., 1995, 270: 26890–26896.

    Article  Google Scholar 

  10. Roll, J. T., Shah, V. K., Dean, D. R. et al., Charateristics of NIFNE inAzotobacter vinelandii strains, J. Biol. Chem., 1995, 270: 4432–4437.

    Article  Google Scholar 

  11. Goodwin, P. J., Agar, G. N., Roll, J. T. et al., TheAzotobacter vinelandii NifEN complex contains two identical [4Fe-4S] clusters, Biochemistry, 1998, 37: 10420–10428.

    Article  Google Scholar 

  12. Suh, M. H., Pulakat, L., Gavini, N., Functional expression of the FeMo-cofactor-specific biosynthetic genesnifEN as a NifE-N fusion-protein synthesizing unit inAzotobacter vinelandii, Biochem. Biophys. Res. Commun., 2002, 299: 233–240.

    Article  Google Scholar 

  13. Hu, Y., Fay, A. W., Ribbe, M. W., Identification of a nitrogenase FeMo cofactor precursor on NifEN complex, Proc. Natl. Acad. Sci. USA, 2005, 102: 3236–3241.

    Article  Google Scholar 

  14. Siemann, S., Schneider, K., Behrens, K. et al., FeMo cofactor biosynthesis in a nifE mutant ofRhodobacter capsulatus, Eur. J. Biochem., 2001, 268: 1940–1952.

    Article  Google Scholar 

  15. Zhao, J. F., Zhao, Y., Wang, Z. P. et al., Purification and activationin vitro of MoFe protein from anifE deleted mutant strain ofAzotobacter vinelandii, Acta Bot. Sin., 2003, 45: 815–819.

    Google Scholar 

  16. Zhao, Y., Zhao, J. F., Lü, Y. B. et al., Crystallization of nitrogenase MoFe protein from a mutantnifE deleted strain ofAzotobacter vinelandii, Acta Bot. Sin., 2003, 45: 427–431.

    Google Scholar 

  17. Brigle, K. E., Weiss, M. C., Newton, W. E. et al., Products of the iron-molybdenum cofactor-specific biosynthetic genes,nifE andnifN, are structurally homologous to the products of nitrogenase molybdemum-iron protein genes,nifD andnifK, J. Bacteriol., 1987, 169: 1547–1553.

    Google Scholar 

  18. Strandberg, G. W., Wilson, P. W., Formation of the nitrogen-fixing enzyme system inAzotobacter vinelandii, Can. J. Microbiol., 1968, 14: 25–31.

    Article  Google Scholar 

  19. Burgess, B. K., Jacobs, D. B., Stiefel, E. I., Large scale purification of high activityAzotobacter vinelandii nitrogenase, Biochim. Biophys. Acta, 1980, 614: 196–209.

    Google Scholar 

  20. Ornstein, L., Disc electrophoresis. I. Background and theory, Ann. N. Y. Acad. Sci., 1964, 121: 321–349.

    Article  Google Scholar 

  21. Kuo, C. F., Fridovich, I., A stain for iron-containing proteins sensitive to nanogram levels of iron, Anal. Biochem., 1988, 170: 183–185.

    Article  Google Scholar 

  22. Luo, A. L., Wang, J. W., Li, J. G., A simple method for protein blotting and immunoassay, Chinese Bull. Bot., 1995, 12: 63–64.

    Google Scholar 

  23. Laemmli, U. K., Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, 1970, 227: 680–685.

    Article  Google Scholar 

  24. Blanchard, C. Z., Hales, B. J., Isolation of two forms of nitrogenase VFe protein fromAzotobacter vinelandii, Biochemistry, 1996, 35: 472–478.

    Article  Google Scholar 

  25. Robinson, A. C., Chun, T. W., Li, J. G. et al., Iron-molybdenum cofactor insertion into the apo-MoFe protein of nitrogenase involves the iron protein-MgATP complex, J. Biol. Chem., 1989, 264: 10088–10095.

    Google Scholar 

  26. McLean, P. A., Wink, D. A., Chapman, S. K. et al., A new method for extraction of iron-molybdenum cofactor (FeMo-co) from nitrogenase adsorbed to DEAE-cellulose. 1. Effects of anions, cations, and preextraction treatments, Biochemistry, 1989, 28: 9402–9406.

    Article  Google Scholar 

  27. Wink, D. A., McLean, P. A., Hickman, A. B. et al., A new method for extraction of iron-molybdenum cofactor (FeMo-co) from nitrogenase adsorbed to DEAE-cellulose. 2. Solubilization of FeMo-co in a wide range of organic solvents, Biochemistry, 1989, 28: 9407–9412.

    Article  Google Scholar 

  28. Rangaraj, P., Ryle, M. J., Lanzilotta, W. N. et al.,In vitro biosynthesis of iron-molybdenum cofactor and maturation of the nif-encoded apodinitrogenase. Effect of substitution for NifH with site-specifically altered forms of NifH, J. Biol. Chem., 1999, 274: 19778–19784.

    Article  Google Scholar 

  29. Christiansen, J., Goodwin, P. J., Lanzilotta, W. N. et al., Catalytic and biophysical properties of a nitrogenase Apo-MoFe protein produced by a nifB-deletion mutant ofAzotobacter vinelandii, Biochemistry, 1998, 37: 12611–12623.

    Article  Google Scholar 

  30. Hawkes, T. R., Smith, B. E., Purification and characterization of the inactive MoFe protein (NifB-Kp1) of the nitrogenase fromnifB mutants ofKlebsiella pneumoniae, Biochem. J., 1983, 209: 43–50.

    Google Scholar 

  31. Hawkes, T. R., Smith, B. E., The inactive MoFe protein (NifB Kpl) of the nitrogenase fromnifB mutantsof Klebsiella pneumoniae: its interaction with FeMo-cofactor and the properties of the active MoFe protein formed, Biochem. J., 1984, 223: 783–792.

    Google Scholar 

  32. Hu, Y., Fay, A. W., Dos Santos, P. C. et al., Characterization ofAzotobacter vinelandii nifZ deletion strains, J. Biol. Chem., 2004, 279: 54963–54971.

    Article  Google Scholar 

  33. Stephens, P. J., McKenna, C. E., McKenna, M. C. et al., Circular dichroism and magnetic circular dichroism of reduced molybdenum-iron ofAzotobacter vinelandii nitrogenase—Biochemstry, 1981, 20: 2857–2864.

    Article  Google Scholar 

  34. Huang, J. F., Luo, A. L., Xie, X. M. et al., Study on the circular dichroism spectroscopy of the disassembly and assembly of metal clusters in molybdenum-iron protein, Acta Microbiol. Sin., 1991, 31: 232–239.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jufu Huang.

About this article

Cite this article

Zhao, Y., Bian, S., Zhang, C. et al. Characterization of a FeMo cofactor-deficient MoFe protein from anifE-deleted strain (DJ35) ofAzotobacter vinelandii . Chin.Sci.Bull. 50, 2305–2310 (2005). https://doi.org/10.1007/BF03183740

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF03183740

Keywords

Navigation