Abstract
The use of microfabricated microfluidic devices offers significant advantages over current technologies including fast analysis time and small reagent requirements. In the context of proteomic research, the possibility of using affinity-based separations for prefractionation of samples using microfluidic devices has significant potential. We demonstrate the use of microscale devices to achieve affinity separations of proteins using a device fabricated from borosilicate glass wafers. Photolithography and wet etching are used to pattern individual glass wafers and the wafers are fusion bonded at 650°C to obtain enclosed channels. A polymer has been successfully polymerizedin situ and used either as a frit for packing beads or, when derivatized with Cibacron Blue 3GA, as a separation matrix. Both of these technologies are based onin situ UV photopolymerization of glycidyl methacrylate (GMA) and trimethylolpropane trimethacrylate (TRIM) in channels.
Similar content being viewed by others
References
Lee, K. H. (2001) Proteomics: A technology-driven and a technology-limited discovery science.Trends Biotechnol. 19: 217–222.
Liu, H., D. Lin, and J. H. Yates, III (2002) Review: Multidimensional separations for protein/peptide analysis in the post-genomic era.Bio Techniques 32: 898–911.
Gavin, A. C., M. Bosche, R. Krause, P. Grandi, M. Marzioch, A. Bauer, J. Schultz, J. M. Rick, A. M. Michon, C. M. Cruciat, M. Remor, C. Hofert, M. Schelder, M. Brajenovic, H. Ruffner, A. Merino, K. Klein, M. Hudak, D. Dickson, T. Rudi, V. Gnau, A. Bauch, S. Bastuck, B. Huhse, C. Leutwein, M. A. Heurtier, R. R. Copley, A. Edelmann, E. Ouerfurth, V. Rybin, G. Drewes, M. Raida, T. Bouwmeester, P. Bork, B. Seraphin, B. Kuster, G. Neubauer, and G. Superti-Furga (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes.Nature 415: 141–147.
Ho, Y., A. Gruhler, A. Heilbut, G. D. Bader, L. Moore, S. L. Adams, A. Millar, P. Taylor, K. Bennett, K. Boutilier, L. Y. Yang, C. Wolting, I. Donaldson, S. Schandorff, J. Shewnarane, M. Vo, J. Taggart, M. Goudreault, B. Muskat, C. Alfarano, D. Dewar, Z. Lin, K. Michalickova, A. R. Willems, H. Sassi, P. A. Nielsen, K. J. Rasmussen, J. R. Andersen, L. E. Johansen, L. H. Hansen, H. Jespersen, A. Podtelejnikov, E. Nielsen, J. Crawford, V. Poulsen, B. D. Sorensen, J. Matthiesen, R. C. Hendrickson, F. Gleeson, T. Pawson, M. F. Moran, D. Durocher, M. Mann, C. W. V. Hogue, D. Figeys, M. Tyers (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.Nature 415: 180–183.
Kumar, A. and M. Snyder (2002) Protein complexes take the bait.Nature. 415: 123–124.
Raymackers, J., A. Daniels, V. De Brabandere, C. Missiaen, M. Dauwe, P. Verhaert, E. Vanmechelen, and L. Meheus (2000) Identification of two-dimensionally separated human cerebrospinal fluid proteins by N-terminal sequencing, matrix-assisted laser desorption/ionizationmass spectrometry, nanoliquid chromatography-electrospray ionization-time of flight-mass spectrometry, and tandem mass spectrometry.Electrophoresis 21: 2266–2283.
Ericson, C., J. Holm, T. Ericson, and S. Hjerten (2000) Electroosmosis- and pressure-driven chromatography in chips using continuous beds.Anal. Chem. 72: 81–87.
Von Heeren, F., E. Verpoorte, A. Manz, and W. Thormann (1996) Micellar electrokinetic chromatography separations and analyses of biological samples on a cyclic planar microstructure.Anal. Chem. 68: 2044–2053.
Harrison, D. J., A. Manz, Z. H. Fan, H. Ludi, and H. M. Widmer (1992) Capillary electrophoresis and sample injection systems integrated on a planar glass chip.Anal. Chem. 64: 1926–1932.
Dolník, V., S. Liu, and S. Jovanovich (2000) Review: Capillary electrophoresis on microchip.Electrophoresis 21: 41–54.
Yao, S., D. S. Anex, W. B. Caldwell, D. W. Arnold, K. B. Smith, and K. B. Schultz (1999) SDS capillary gel electrophoresis of proteins in microfabricated channels.Proc. Natl. Acad. Sci. USA 96: 5372–5377.
Bousse, L., S. Mouradian, A. Minalla, H. Yee, K. Williams, and R. Dubrow (2001) Protein sizing on a microchip.Anal. Chem. 73: 1207–1212.
Hofmann, O., D. Che, K. A. Cruichshank, and U. R. Müller (1999) Adaptation of capillary isoelectric focusing to microchannels on a glass chip.Anal. Chem. 71: 678–686.
Bashir, R., R. Gomez, A. Sarikaya, M. R. Ladisch, J. Sturgis, and J. P. Robinson (2001) Adsorption of avidin on microfabricated surfaces for protein biochip applicationBiotechnol. Bioeng. 73: 324–328.
Bernard, A., D. Fitzli, P. Sonderegger, E. Delamarche, B. Michel, H. R. Bosshard, and H. Biebuyck (2001) Affinity capture of proteins from solution and their dissociation by contact printing.Nat. Biotechnol. 19: 866–869.
Fan, Z. H., S. Mangru, R. Granzow, P. Heaney, W. Ho, O. Dong, and R. Kumar (1999) Dynamic DNA hybridization on a chip using paramagnetic beads.Anal. Chem. 71: 4851–4859.
Oleschuk, R. D., L. L. Shultz-Lockyear, Y. Ning, and D. J. Harrison (2000) Trapping of bead-based reagents within microfluidic systems: On-chip solid-phase extraction and electrochromatography.Anal. Chem. 72: 585–590.
Buranda, T., J. Huang, V. H. Perez-Luna, B. Schreyer, L. A. Sklar, and G. P. Lopez (2002) Biomolecular recognition on well-characterized beads packed in microfluidic channels.Anal. Chem. 74: 1149–1156.
Wang, C., R. Oleschuk, F. Ouchen, J. Li, P. Thibault, and D. J. Harrison (2000) Integration of immobilized trypsin bead beds for protein digestion within a microfluidic chip incorporating capillary electrophoresis separations and an electrospray mass spectrometry interface.Rapid Commun. Mass Spectrom. 14: 1377–1383.
Throckmorton, D. J., T. J. Shepodd, and A. Singh (2002) Electrochromatography in microchips: Reversed-phase separation of peptides and amino acids using photopatterned rigid polymer monoliths.Anal. Chem. 74: 784–789.
Viklund, C., E. Pontén, B. Glad, K. Irgum, P. Hörstedt, and F. Svec (1997) “Molded” macroporous poly (glycidyl methacrylate-co-trimethylolpropane trimethacrylate) materials with fine controlled porous properties: Preparation of monoliths using photoinitiated polymerization.Chem. Mater. 9: 463–471.
Chen, C. H. and W. C. Lee (2001) Affinity chromatography of proteins on non-porous copolymerized particles of styrene, methyl methacrylate and glycidyl methacrylate.J. Chromatogr. 921: 31–37.
Chen, J. R., M. T. Dulay, and R. N. Zare (2000) Macroporous photopolymer frits for capillary electrochromatography.Anal. Chem. 72: 1224–1227.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Li, C., Lee, WC. & Lee, K.H. Affinity separations using microfabricated microfluidic devices:In situ photopolymerization and use in protein separations. Biotechnol. Bioprocess Eng. 8, 240–245 (2003). https://doi.org/10.1007/BF02942272
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF02942272