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The first complete genome sequence of garlic common latent virus occurring in India

  • Vineeta Yadav
  • Shahana MajumderEmail author
Short Communication
  • 7 Downloads

Abstract

The complete genome sequence of a garlic common latent virus (GarCLV) isolate collected from NHRDF, Karnal, India was determined. The whole genome of this GarCLV isolate consists of 8573 nucleotides, excluding the 3′-end poly-A tail. The sequence is 91–93% similar to rest of the five whole genome sequences available till date. It contains six open reading frames (ORFs) which encode polypeptide of 219 kDa, 25 kDa, 11 kDa, 7 kDa, 32.74 kDa and 15 kDa from ORF1, ORF2, ORF3, ORF4, ORF5 and ORF6 respectively. The phylogenetic study based on coat protein sequence demonstrated high diversity present among Indian population of GarCLV.

Keywords

Molecular characterization Garlic common latent virus Complete genome 

Notes

Supplementary material

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Supplementary material 1 (DOCX 13 kb)
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Supplementary material 2 (JPEG 49 kb)
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Supplementary material 3 (JPEG 36 kb)

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Copyright information

© Indian Virological Society 2019

Authors and Affiliations

  1. 1.Department of BiotechnologySharda UniversityG. NoidaIndia

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