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Biophysical Reviews

, Volume 11, Issue 3, pp 449–455 | Cite as

Mechanisms of ferritin assembly studied by time-resolved small-angle X-ray scattering

  • Daisuke Sato
  • Masamichi IkeguchiEmail author
Review

Abstract

The assembly reaction of Escherichia coli ferritin A (EcFtnA) was studied using time-resolved small-angle X-ray scattering (SAXS). EcFtnA forms a cage-like structure that consists of 24 identical subunits and dissociates into dimers at acidic pH. The dimer maintains native-like secondary and tertiary structures and can reassemble into a 24-mer when the pH is increased. The time-dependent changes in the SAXS profiles of ferritin during its assembly were roughly explained by a simple model in which only tetramers, hexamers, and dodecamers were considered intermediates. The rate of assembly increased with increasing ionic strength and decreased with increasing pH (from pH 6 to pH 8). These tendencies might originate from repulsion between assembly units (dimers) with the same net charge sign. To test this hypothesis, ferritin mutants with different net charges (net-charge mutants) were prepared. In buffers with low ionic strength, the rate of assembly increased with decreasing net charge. Thus, repulsion between the assembly unit net charges was an important factor influencing the assembly rate. Although the differences in the assembly rate among net-charge mutants were not significant in buffers with an ionic strength higher than 0.1, the assembly rates increased with increasing ionic strength, suggesting that local electrostatic interactions are also responsible for the ionic-strength dependence of the assembly rate and are, on average, repulsive.

Keywords

Assembly Electrostatic interaction Ferritin Net charge Small-angle X-ray scattering (SAXS) 

Notes

Acknowledgments

This work was supported in part by a Sasakawa Scientific Research Grant (to D.S.) from the Japan Science Society. The synchrotron radiation SAXS experiments were performed at BL45XU of SPring-8 with the approval of the Japan Synchrotron Radiation Research Institute (JASRI), Hyogo, Japan (proposals 2011A1133, 2012A1217, 2012B1114, 2013B1392, 2015A1374, 2016B1217, 2017A1403, 2017B1308, 2018A1062, 2018A1262, and 2018B1404). This research was supported in part by the Platform for Drug Discovery, Information, and Structural Life Science of the Ministry of Education, Culture, Sports, Science and Technology of Japan. The authors thank Dr. Takaaki Hikima of RIKEN for assistance with the beamline alignment.

Compliance with ethical standards

Conflict of interest

Daisuke Sato declares that he has no conflict of interest. Masamichi Ikeguchi declares that he has no conflict of interest.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

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Copyright information

© International Union for Pure and Applied Biophysics (IUPAB) and Springer-Verlag GmbH Germany, part of Springer Nature 2019

Authors and Affiliations

  1. 1.Department of BioinformaticsSoka UniversityTokyoJapan

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