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Emergence of New Pathogenic Variants in Colletotrichum falcatum, Stalk Infecting Ascomycete in Sugarcane: Role of Host Varieties

  • R. ViswanathanEmail author
  • P. Padmanaban
  • R. Selvakumar
Research Article
  • 17 Downloads

Abstract

Red rot caused by Colletotrichum falcatum is more than a century old disease in sugarcane, responsible for several epiphytotics in India. Due to breakdown of many elite hybrid varieties to the pathogen, they were removed from cultivation in different decades. Overall, red rot resistance in sugarcane varieties was found to be short lived. Since emergence of new variants is regular under our conditions a 10-year (2007–2017) detailed field study was taken up to assess behavior of 12 C. falcatum isolates including four designated pathotypes of the tropical region on 20 popular varieties varying in disease resistance under field conditions. Virulence behavior of C. falcatum isolates was grouped under virulent, moderately virulent and less virulent categories. The results revealed that the isolates always exhibited virulence on the susceptible varieties but not on the resistant and moderately susceptible varieties. The isolates originated from susceptible and moderately susceptible varieties did not show any distinction in their virulence. Virulence frequencies of the isolates on the moderately susceptible varieties ranged of 21.3–40% as compared to 62.9–97.9% on the susceptible varieties. One of the eight resistant varieties succumbed to the pathogen virulence on a few occasions which indicated that the pathogen is able to breach the barriers of resistance and caused disease on the variety. Further, the isolates of more than 20 years such as Cf419, Cf671 and Cf997 exhibited less virulence with more than 50% as compared to the nine isolates originated after 2000 except Cf95020. Overall, the present study revealed that C. falcatum isolates exhibited a year to year variation in their virulence on the host varieties, attempting to overpower host resistance, leading to emergence of new variants.

Keywords

Sugarcane Red rot Colletotrichum falcatum Virulence Host adaptation 

Notes

Acknowledgements

Authors are thankful to the Directors of the Institute for providing facilities. Technical support rendered by Dr. R. Jothi, Mr. R. Murugesan, Mr. S. Shanmugam, Mr. K. Manivannan, Mr. K. Kaverinathan and Mr. R. Nithiyanantham for conducting field trials is acknowledged.

Funding

This research did not receive any specific grant from funding agencies in the public, commercial or not-for-profit sectors.

Compliance with Ethical Standards

Conflict of interest

The authors declare that they have no conflict of interest.

Supplementary material

12355_2019_780_MOESM1_ESM.docx (47 kb)
Supplementary material 1 (DOCX 46 kb)
12355_2019_780_MOESM2_ESM.docx (14 kb)
Supplementary material 2 (DOCX 14 kb)

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Copyright information

© Society for Sugar Research & Promotion 2019

Authors and Affiliations

  1. 1.Division of Crop ProtectionICAR-Sugarcane Breeding InstituteCoimbatoreIndia

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