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Science China Life Sciences

, Volume 61, Issue 12, pp 1515–1527 | Cite as

Whole genome engineering by synthesis

  • Zhouqing Luo
  • Qing Yang
  • Binan Geng
  • Shuangying Jiang
  • Shihui Yang
  • Xiaozheng Li
  • Yizhi Cai
  • Junbiao Dai
Review

Abstract

Whole genome engineering is now feasible with the aid of genome editing and synthesis tools. Synthesizing a genome from scratch allows modifications of the genomic structure and function to an extent that was hitherto not possible, which will finally lead to new insights into the basic principles of life and enable valuable applications. With several recent genome synthesis projects as examples, the technical details to synthesize a genome and applications of synthetic genome are addressed in this perspective. A series of ongoing or future synthetic genomics projects, including the different genomes to be synthesized in GP-write, synthetic minimal genome, massively recoded genome, chimeric genome and synthetic genome with expanded genetic alphabet, are also discussed here with a special focus on theoretical and technical impediments in the design and synthesis process. Synthetic genomics will become a commonplace to engineer pathways and genomes according to arbitrary sets of design principles with the development of high-efficient, low-cost genome synthesis and assembly technologies.

Keywords

synthetic biology synthetic genome genome engineering functional genomics genome design 

Notes

Acknowledgements

This work was supported by the National Natural Science Foundation of China (31725002), by Bureau of International Cooperation, Chinese Academy of Sciences (172644KYSB20170042) and by the Key Research Program of the Chinese Academy of Sciences (KFZD-SW- 215). We also thank the financial support from Youth Innovation Promotion Association of the Chinese Academy of Sciences (2018396), China Postdoctoral Science Foundation (2017M620393) and Technical Innovation Special Fund of Hubei Province (2018ACA149).

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Copyright information

© Science China Press and Springer-Verlag GmbH Germany, part of Springer Nature 2018

Authors and Affiliations

  • Zhouqing Luo
    • 1
  • Qing Yang
    • 1
    • 2
  • Binan Geng
    • 1
    • 2
  • Shuangying Jiang
    • 1
  • Shihui Yang
    • 2
  • Xiaozheng Li
    • 3
  • Yizhi Cai
    • 1
    • 4
  • Junbiao Dai
    • 1
    • 3
  1. 1.Shenzhen Key Laboratory of Synthetic Genomics and Center for Synthetic Genomics, Institute of Synthetic Biology, Shenzhen Institutes of Advanced TechnologyChinese Academy of SciencesShenzhenChina
  2. 2.Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, Hubei Key Laboratory of Industrial Biotechnology, College of Life SciencesHubei UniversityWuhanChina
  3. 3.College of Life Sciences and OceanographyShenzhen UniversityShenzhenChina
  4. 4.College Manchester Institute of BiotechnologyUniversity of ManchesterManchesterUK

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