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Molecular Biology Reports

, Volume 47, Issue 2, pp 1413–1434 | Cite as

RNA: interactions drive functionalities

  • Xiaofeng DaiEmail author
  • Shuo Zhang
  • Kathia Zaleta-Rivera
Review

Abstract

RNA is produced from the majority of human genomic sequences, although only a relatively small portion of these transcripts has known functions. Diverse RNA species interact with RNA, DNA, proteins, lipids, and metabolites to form intricate molecular networks. In this review, we attempt to delineate diverse RNA functions by interaction types between RNA and other macromolecules. Through such interactions RNAs participate in essentially every major molecular function and process, including information flow and storage, environment sensing, signal transduction, and gene regulation at transcriptional and posttranscriptional levels. Through such interactions, RNAs promote or inhibit diverse biological processes, and act as catalyzer or quencher to modulate the pace of these progresses. Alterations and personal variations of these interactions are mechanistically coupled with disease etiology and phenotypical variations for clinical use.

Keywords

RNA interaction Non-coding RNA Functionalities 

Notes

Author contributions

XFD conceptualised the ideas, conducted the literature search, prepared the figures, tables, and drafted the manuscript. SZ and KZR contributed to literature search, analysis and preparation of figures and tables. All authors have read and approved the manuscript.

Funding

This study was funded by the National Natural Science Foundation of China (Grant No. 81972789), the National Science and Technology Major Project (Grant No. 2018ZX10302205-004-002), the Six Talent Peaks Project in Jiangsu Province (Grant No. SWYY-128), Technology Development Funding of Wuxi (Grant No. WX18IVJN017), Major Project of Science and Technology in Henan Province (Grant No.161100311400). These funding sources have no role in the writing of the manuscript or the decision to submit it for publication.

Compliance with ethical standards

Conflict of interest

The authors declares that they have no conflict of interest.

Supplementary material

11033_2019_5230_MOESM1_ESM.pdf (110 kb)
Supplementary material 1 Schematic representations of other types of RNA-macromolecule interactions with typical examples.(A) RNA-lipid interaction: interactions between the lncRNA LINK-A and the phospholipid PI(3,4,5)P3; (B) RNA-metaboliteinteraction: riboswitch (PDF 110 kb)

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Copyright information

© Springer Nature B.V. 2019

Authors and Affiliations

  1. 1.Wuxi School of MedicineJiangnan UniversityWuxiChina
  2. 2.School of BiotechnologyJiangnan UniversityWuxiChina
  3. 3.Department of BioengineeringUniversity of California San DiegoSan DiegoUSA

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