Skip to main content
Log in

Gene sequences of vromindolines in Avena species

  • Research Article
  • Published:
Genetic Resources and Crop Evolution Aims and scope Submit manuscript

Abstract

Vromindolines, a family of oat starch-bound proteins responsible for the extremely soft endosperm of this cereal, are characterized by a tryptophan-rich domain and ten conserved cysteine residues, as it was observed in the starch-bound proteins from other cereals, and proved to be specific of the genus Avena. Two-dimensional electrophoresis of vromindolines from different oat species, both cultivated and wild, revealed that they are present in all genomes and ploidy levels, with no major differences in their molecular weight and electrophoretic mobility. PCR amplification and sequencing of genes coding for VIN-2 and VIN-3 indicated that both proteins are strongly conserved across the species analysed. Some differences were found between diploid and polyploid accessions at specific amino acid positions along the protein. In particular the C-genome accessions (A. clauda, A. eriantha, A. ventricosa) differed from the A-genome diploids (A. canariensis, A. damascena, A. longiglumis, A. nuda, A. strigosa) for some peculiar sequences. Tetraploids (A. barbata, A. magna and A. insularis) showed two sequences each for both proteins; the variability observed in them was similar to that found in A. sativa. The characteristics of these genes could help to clarify the genetic relationship among the various species of the genus Avena. Moreover, the knowledge of the genetic control of these proteins represent an important tool for the modulation of oat endosperm texture.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Similar content being viewed by others

References

  • Alfieri M, Redaelli R, Taddei F, Pogna NE, Gazza L (2010) Caratteristiche biochimiche ed elettroforetiche di proteine legate all’amido in avena. Dal Seme 3:26–36 (in Italian)

    Google Scholar 

  • Bhave M, Morris CF (2008) Molecular genetics of puroindolines and related genes: allelic diversity in wheat and other grasses. Plant Mol Biol 66:205–219

    Article  CAS  PubMed  Google Scholar 

  • Butt MS, Thair-Nadeem M, Khan MKI, Shabir R (2008) Oat: unique among the cereals. Eur J Nutr 47(2):68–79

    Article  CAS  PubMed  Google Scholar 

  • Corona V, Gazza L, Boggini G, Pogna NE (2001a) Variation in friabilin composition as determined by A-PAGE fractionation and PCR amplification, and its relationship to grain hardness in bread wheat. J Cereal Sci 34:243–250

    Article  CAS  Google Scholar 

  • Corona V, Gazza L, Zanier R, Pogna NE (2001b) A tryptophan-to-arginine change in the tryptophan-rich domain of puroindoline b in five French bread wheat cultivars. J Genet Breed 55:187–189

    CAS  Google Scholar 

  • Dellaporta SL, Wood J, Hicks JB (1983) A plant DNA minipreparation: version II. Plant Mol Biol Rep 1:19–21

    Article  CAS  Google Scholar 

  • Fu Y-B, Williams DJ (2008) AFLP variation in 25 Avena species. Theor Appl Genet 117:333–342

    Article  CAS  PubMed  Google Scholar 

  • Gazza L (2010) Molecular and biochemical basis of the trait “softness” in the kernel of Avena ssp. PhD Thesis (in Italian). Plant Biotechnology XXII Cycle, University of “la Tuscia”, Viterbo, Italy

  • Giroux MJ, Morris CF (1997) A glycine to serine change in puroindoline b is associated with grain hardness and low levels of starch-surface friabilin. Theor Appl Genet 95:857–864

    Article  CAS  Google Scholar 

  • Li W-T, Peng Y-Y, Wei Y-M, Baum BR, Zheng Y-L (2009) Relationships among Avena species as revealed by consensus chloroplast simple sequence repeat (ccSSR) markers. Genet Res Crop Evol 56:465–480

    Article  CAS  Google Scholar 

  • Loskutov IG, Rines HW (2011) Avena. In: Kole C (ed) Wild crop relatives: genetic and breeding resources. Vol. 1 Cereals. Springer, Heidelberg

  • Nikoloudakis N, Katsiotis A (2008) The origin of C-genome and cytoplasm of Avena polyploids. Theor Appl Genet 117:273–281

    Article  CAS  PubMed  Google Scholar 

  • Peng Y-Y, Wei Y-M, Baum BR, Yan Z-H, Lan X-J, Dai S-F, Zheng Y-L (2010) Phylogenetic inferences in Avena based on analysis of FL intron 2 sequences. Theor Appl Genet 121(5):985–1000

    Article  PubMed  Google Scholar 

  • Peterson DM (1992) Composition and nutritional characteristics of oat grain and products. In: Marshall and Sorrells (eds) Oat Science and Technology, Am Soc Agronomy Crop Sci Soc of America, Madison

  • Redaelli R, Morel M-H, Autran J-C, Pogna NE (1995) Genetic analysis of low Mr glutenin subunits fractionated by two-dimensional electrophoresis (A-PAGE × SDS-PAGE). J Cereal Sci 21:5–13

    Article  CAS  Google Scholar 

  • Redaelli R, Alfieri M, Vaccino P, Gazza L, Taddei F, Gazzelloni G, Galassi E, Pogna NE (2011) Analisi biochimiche, molecolari e tecnologiche di proteine legate all’amido in cariossidi di avena. Risultati del Progetto VROTECH. In: “Evoluzione e rilancio della filiera dei cereali.Biodiversità, sostenibilità, tecnologia e nutrizione”, AISTEC Ed., Roma, pp 36–39 (in Italian)

  • Tanchak MA, Schernthaner JP, Giband M, Altosaar I (1998) Tryptophanins: isolation and molecular characterization of oat cDNA clones encoding proteins structurally related to puroindoline and wheat grain softness proteins. Plant Sci 137:173–184

    Article  CAS  Google Scholar 

  • Thomas H (1992) Cytogenetics of Avena. In: Marshall HG and Sorrells ME (eds) Oat Science and Technology. Am Soc Agronomy Crop Sci Soc of America, Madison

  • Zhou M, Robards K, Glenie-Holmes M, Helliwell S (1998) Structure and pasting properties of oat starch. Cereal Chem 75(3):273–281

    Article  Google Scholar 

Download references

Acknowledgments

This research was supported by a grant of the Italian Ministry of Agriculture, project VROTECH (D.M. n. 19177-7303-08, 19.12.2008).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Michela Alfieri.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Alfieri, M., Gazza, L., Pogna, N.E. et al. Gene sequences of vromindolines in Avena species. Genet Resour Crop Evol 61, 1481–1490 (2014). https://doi.org/10.1007/s10722-014-0123-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10722-014-0123-4

Keywords

Navigation