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Flaviflagellibacter deserti gen. nov., sp. nov., a novel member of the order Rhizobiales isolated from a desert soil

  • Lei Dong
  • Ming-Xian Han
  • Dong Wang
  • Feng Liu
  • Mipeshwaree Devi Asem
  • Jian-Yu Jiao
  • Min Xiao
  • Nimaichand SalamEmail author
  • Wen-Jun LiEmail author
Original Paper
  • 32 Downloads

Abstract

A motile, rod-shaped and yellow coloured proteobacterium, designated strain SYSU D60017T, was isolated from a desert soil sample. The bacterium was found to be an obligately aerobic, mesophilic and neutrophilic chemo-heterotroph. Cells were observed to be Gram-stain negative, catalase positive and oxidase positive. The major cellular fatty acids were identified as C19:0ω8c cyclo and Summed Feature 8 (C18:1ω7c and/or C18:1ω6c). The main respiratory quinone identified was ubiquinone-10. The DNA G + C content was determined to be 63.8% based on draft genome sequence data. The polar lipids detected were identified as diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and five unidentified polar lipids. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain SYSU D60017T is a member of the order Rhizobiales, but forms a distinct phylogenetic lineage. The differences in the phenotypic characteristics from members of related genera and its distinct phylogenetic position suggested that the isolate SYSU D60017T represents a novel species of a novel genus within the order Rhizobiales, for which the name Flaviflagellibacter deserti gen. nov., sp. nov. is proposed. The type strain of the new taxon is SYSU D60017T (= CGMCC 1.16444T = NBRC 112958T).

Keywords

Flaviflagellibacter deserti gen. nov., sp. nov. Rhizobiales Desert sample 

Notes

Acknowledgements

This research was partly funded by the National Natural Science Foundation of China (Project No. 31850410475) and Natural Science Foundation of Guangdong Province, China (Project No. 2016A030312003). WJL is also supported by Guangdong Province Higher Vocational Colleges and Schools Pearl River Scholar Funded Scheme (2014).

Compliance with ethical standards

Conflict of interest

The authors declare that they have no conflict of interest.

Human and animal rights statement

This article does not contain any study with human participants or animals performed by any of the authors.

Supplementary material

10482_2019_1228_MOESM1_ESM.docx (2.3 mb)
Supplementary material 1 (DOCX 2365 kb)

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Copyright information

© Springer Nature Switzerland AG 2019

Authors and Affiliations

  1. 1.State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant ResourcesSun Yat-Sen UniversityGuangzhouPeople’s Republic of China
  2. 2.State Key Laboratory of Biogeology and Environmental GeologyChina University of GeosciencesWuhanPeople’s Republic of China
  3. 3.College of Life Science and TechnologyHonghe UniversityMengziPeople’s Republic of China
  4. 4.Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and GeographyChinese Academy of SciencesŰrűmqiPeople’s Republic of China

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