Molecular characterization of a novel potyvirus infecting noni

  • Pingxiu Lan
  • Peng He
  • Yongke Zhang
  • Song Zhang
  • Zubing Zhang
  • Xiaojiao Chen
  • Songtao Tan
  • Hengming Luo
  • Mengji CaoEmail author
  • Fan LiEmail author
Annotated Sequence Record


The complete genomic sequence of a novel potyvirus from a noni plant in China (Morinda citrifolia) with foliar mosaic and chlorotic symptoms was determined. The genomic RNA consists of 9645 nucleotides (nt) excluding the poly(A) tail, containing the typical open reading frame (ORF) of potyviruses and encoding a large putative polyprotein of 3077 amino acids (aa). Pairwise comparisons showed that the virus shares 48.8%–58.5% sequence identity at the genome sequence level, and 38.5%–53.4% identity at the polyprotein sequence level with other members of the genus Potyvirus. Phylogenetic analysis indicated that the virus is most closely related to jasmine virus T and plum pox virus in the genus Potyvirus. These results suggest that this virus should be considered a distinct member of the genus Potyvirus, and it was tentatively named “noni mosaic virus” (NoMV).



This study was funded by the Program for Innovative Research Team (in Science and Technology) of the University of Yunnan Province (Yunjiaoke 2014-22), the National Science Foundation of China (31660509), and the Chongqing Research Program of Basic Research and Frontier Technology (cstc2017jcyjBX0016).

Compliance with ethical standards

Conflict of interest

As the corresponding author, Fan Li declares that there is no conflict of interest involving in the authors of this paper.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Supplementary material

705_2019_4400_MOESM1_ESM.pptx (92 kb)
Supplementary material 1 (PPTX 91 kb)
705_2019_4400_MOESM2_ESM.docx (18 kb)
Supplementary material 2 (DOCX 18 kb)


  1. 1.
    Abou AR, Darwis Y, Abdulbaqi IM, Khan AA, Vuanghao L, Laghari MH (2017) Morinda citrifolia (Noni): a comprehensive review on its industrial uses, pharmacological activities, and clinical trials. Arab J Chem 10:691–707CrossRefGoogle Scholar
  2. 2.
    Pandy V, Khan Y (2016) Noni (Morinda citrifolia Linn.) fruit juice attenuates the rewarding effect of ethanol in conditioned place preference in mice. Exp Anim 65(4):437–445CrossRefGoogle Scholar
  3. 3.
    Nishijima KA, Wall MM, Chang LC, Wei Y, Wong DKW (2011) First report of association of mucor circinelloides on noni (Morinda citrifolia) in Hawaii. Plant Dis 95(3):360CrossRefGoogle Scholar
  4. 4.
    Fu MY, Wang HF, Chen MC (2013) First report of the root-knot nematode Meloidogyne arenaria infecting noni in China. Plant Dis 97(11):1518CrossRefGoogle Scholar
  5. 5.
    Souza VHMD, Bonfim Junior MF, Antedomenico SR, Inomoto MM (2015) First report of Meloidogyne javanica infesting noni (Morinda citrifolia) in Brazil. New Dis Rep 31:12CrossRefGoogle Scholar
  6. 6.
    Sarwade PP, Sarwade KP, Chavan SS (2015) New first report of foliar phytoplasma disease on Bartondi plant in India. J Plant Pathol Microbiol 6:3CrossRefGoogle Scholar
  7. 7.
    Shen P, Tian X, Zhang S, Ren F, Li P, Yu YQ, Li RH, Zhou ChY, Cao MJ (2018) Molecular characterization of a novel luteovirus infecting apple by next-generation sequencing. Arch Virol 163(3):761–765CrossRefGoogle Scholar
  8. 8.
    Kumar S, Stecher G, Tamura K (2016) Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33(7):1870–1874CrossRefGoogle Scholar
  9. 9.
    Adams MJ, Antoniw JF, Beaudoin F (2005) Overview and analysis of the polyprotein cleavage sites in the family potyviridae. Mol Plant Pathol 6:471–487CrossRefGoogle Scholar
  10. 10.
    Worrall EA, Hayward AC, Fletcher SJ, Mitter N (2019) Molecular characterization and analysis of conserved potyviral motifs in bean common mosaic virus (BCMV) for RNAi-mediated protection. Arch Virol 164(3):181–194CrossRefGoogle Scholar
  11. 11.
    Gibbs A, Ohshima K (2010) Potyviruses and the digital revolution. Annu Rev Phytopathol 48(1):205–223CrossRefGoogle Scholar
  12. 12.
    Martin DP, Murrell B, Golden M, Khoosal A, Muhire B (2015) RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol. 1(1):vev003CrossRefGoogle Scholar

Copyright information

© Springer-Verlag GmbH Austria, part of Springer Nature 2019

Authors and Affiliations

  1. 1.State Key Laboratory for Conservation and Utilization of Bio-Resources in YunnanYunnan Agricultural UniversityKunmingChina
  2. 2.College of Animal Science and TechnologyYunnan Agricultural UniversityKunmingChina
  3. 3.Yunnan Institute of Tropical CropsJinghongChina
  4. 4.National Citrus Engineering Research CenterCitrus Research Institute, Southwest UniversityChongqingChina

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