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Archives of Virology

, Volume 164, Issue 7, pp 1931–1935 | Cite as

Complete nucleotide sequence of a new potexvirus, ‘Cnidium virus X’, isolated from Cnidium officinale in Japan

  • H. Honma
  • D. TsushimaEmail author
  • H. Kawakami
  • N. Fujihara
  • T. Tsusaka
  • M. Kawashimo
  • T. Nishimura
  • S. Fuji
Annotated Sequence Record
  • 59 Downloads

Abstract

A flexuous virus was detected in a Cnidium officinale plant in Japan showing mosaic symptoms. The virus was assigned to the genus Potexvirus based on analysis of its complete nucleotide sequence. The genomic RNA of the virus was 5,964 nucleotides in length, excluding the 3′-terminal poly(A) tail. It contained five open reading frames (ORFs), consistent with other members of Potexvirus. The ORF sequences differ from those of previously reported potexviruses. Phylogenetic analysis indicated that the polymerase of the virus is closely related to that of strawberry mild yellow edge virus; and the CP, to those of both yam virus X and vanilla virus X. We propose that this virus be designated as “cnidium virus X” (CnVX).

Notes

Acknowledgements

The DNA sequencing was performed at the Biotechnology Center of Akita Prefectural University.

Compliance with ethical standards

Conflict of interest

The author declares no competing interests.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Supplementary material

705_2019_4261_MOESM1_ESM.docx (124 kb)
Supplementary material 1 (DOCX 124 kb)

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Copyright information

© Springer-Verlag GmbH Austria, part of Springer Nature 2019

Authors and Affiliations

  • H. Honma
    • 1
  • D. Tsushima
    • 1
    Email author
  • H. Kawakami
    • 1
  • N. Fujihara
    • 2
  • T. Tsusaka
    • 2
  • M. Kawashimo
    • 2
  • T. Nishimura
    • 2
  • S. Fuji
    • 1
  1. 1.Faculty of Bioresource SciencesAkita Prefectural UniversityAkitaJapan
  2. 2.Botanical Raw Materials Research LaboratoriesTsumura & Co.IbarakiJapan

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