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International Journal of Legal Medicine

, Volume 132, Issue 5, pp 1309–1311 | Cite as

Genetic analysis of 17 Y-STR loci from 1026 individuals of Han populations in Jilin Province, Northeast China

  • Wen-Qing Chen
  • Zhen Feng
  • Wei Jin
  • Yi-Jun Zhang
  • Qiang Wang
  • Pei Li
  • Shi-Lin Li
  • Lan-Hai Wei
  • Gang Liu
Population Data

Abstract

In this study, 17 Y-chromosomal short tandem repeats (Y-STRs) were analyzed in 1026 male individuals of Han populations in Changchun City, Jilin Province, Northeast China. The haplotype diversity is 0.99892. The Changchun Han population is close to most Han populations and different from most other minority populations of China. Additionally, the Changchun Han show more affiliations with Han populations in North and Northeast China. These data provide a reference for the Y-STR database in Jilin Province, and they may be valuable for population genetic analysis.

Keywords

Short tandem repeats Y chromosome Changchun Han China 

Notes

Acknowledgments

We are grateful to all sample donors. This study was supported by grants from the Health Technological Innovation Program of Jilin Province (No. 2016J025).

Compliance with ethical standards

Conflict of interest

The authors declare that they have no conflict of interest.

Supplementary material

414_2018_1778_Fig1_ESM.gif (51 kb)
Figure S1

MDS plot for all studied populations. All samples of Han population were indicated by red dot. (GIF 51 kb)

414_2018_1778_MOESM1_ESM.tif (692 kb)
High resolution image (TIFF 691 kb)
414_2018_1778_Fig2_ESM.gif (71 kb)
Figure S2

MDS plot for Han population only. Only the newly reported Jilin samples were indicated by red dot. (GIF 71 kb)

414_2018_1778_MOESM2_ESM.tif (988 kb)
High resolution image (TIFF 987 kb)
414_2018_1778_MOESM3_ESM.xlsx (103 kb)
Table S1 Y-STR haplotypes of 1026 Changchun Han males included in this study (XLSX 102 kb)
414_2018_1778_MOESM4_ESM.xlsx (12 kb)
Table S2 Statistics of haplotype diversity, haplotype match probability, and discrimination capacity parameters for all studied populations (XLSX 12 kb)
414_2018_1778_MOESM5_ESM.xlsx (19 kb)
Table S3 Population differentiation between all studied populations (XLSX 19 kb)
414_2018_1778_MOESM6_ESM.xlsx (13 kb)
Table S4 Population differentiation between Han populations (XLSX 12 kb)

References

  1. 1.
    Gottschang TR, Lary D (2000) Swallows and settlers: the great migration from North China to Manchuria, issue 87 of Michigan monographs in Chinese studies. Center for Chinese Studies, The University of Michigan, Ann ArborGoogle Scholar
  2. 2.
    Excoffier L, Lischer HEL (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10(3):564–567.  https://doi.org/10.1111/j.1755-0998.2010.02847.x CrossRefPubMedGoogle Scholar
  3. 3.
    Han Y, Li L, Liu X, Chen W, Yang S, Wei L, Xia M, Ma T, Jin L, Li S (2016) Genetic analysis of 17 Y-STR loci in Han and Korean populations from Jilin Province, Northeast China. Forensic Sci Int: Genet 22:8–10.  https://doi.org/10.1016/j.fsigen.2016.01.003 CrossRefGoogle Scholar
  4. 4.
    Xu J, Li LM, Wei LH, Nie ZY, Yang SP, Xia MY, Ma T, Sun H, Zhao XY, Ping Y, Zhou HG, Xue FZ, Zhao ZQ, Jin L, Li SL (2016) Genetic analysis of 17 Y-STR loci in Han population from Shandong Province in East China. Forensic Sci Int: Genet 22:e15–e17.  https://doi.org/10.1016/j.fsigen.2016.01.016 CrossRefGoogle Scholar
  5. 5.
    Li LM, Yu G, Li SL, Jin L, Yan S (2015) Genetic analysis of 17 Y-STR loci from 1019 individuals of six Han populations in East China. Forensic Sci Int: Genet 20:101–102.  https://doi.org/10.1016/j.fsigen.2015.10.007 CrossRefGoogle Scholar
  6. 6.
    Shu LL, Li LM, Yu G, Yu BX, Liu YC, Li SL, Jin L, Yan S (2015) Genetic analysis of 17 Y-STR loci in Han, Dong, Miao and Tujia populations from Hunan province, central-southern China. Forensic Sci Int: Genet 19:250–251.  https://doi.org/10.1016/j.fsigen.2015.07.007 CrossRefGoogle Scholar
  7. 7.
    Li LM, Ma T, Xu J, Yang YJ, Yang SP, Xia MY, Sun H, Zhao XY, Ping Y, Zhou HG, Xie JH, Zhao ZQ, Jin L, Li SL (2015) Genetic analysis of 17 Y-STR loci in Han population from Gansu province, northwestern China. Forensic Sci Int: Genet 19:134–135.  https://doi.org/10.1016/j.fsigen.2015.07.008 CrossRefGoogle Scholar
  8. 8.
    Yang YY, Yuan WL, Guo F, Jiang XH (2014) Population data of 17 Y-STR loci in Nanyang Han population from Henan Province, Central China. Forensic Sci Int: Genet 13:145–146.  https://doi.org/10.1016/j.fsigen.2014.07.013 CrossRefGoogle Scholar
  9. 9.
    Bing L, Liang WB, Pi JH, Zhang DM, Yong D, Luo HB, Zhang LS, Lin Z (2013) Population genetics for 17 Y-STR loci(AmpFISTR®Y-filerTM) in Luzhou Han ethnic group. Forensic Sci Int: Genet 7(2):e23–e26.  https://doi.org/10.1016/j.fsigen.2012.11.010 CrossRefGoogle Scholar
  10. 10.
    Liu Y, Liao LC, Gu MB, Ye Y (2014) Population genetics for 17 Y-STR loci in a Chinese Han population sample from Mudanjiang city, Northeast China. Forensic Sci Int: Genet 13:e16–e17.  https://doi.org/10.1016/j.fsigen.2014.05.009 CrossRefGoogle Scholar
  11. 11.
    Bai RF, Zhang Z, Liang QZ, Lu D, Yuan L, Yang X, Shi MS (2013) Haplotype diversity of 17 Y-STR loci in a Chinese Han population sample from Shanxi Province, Northern China. Forensic Sci Int: Genet 7(1):214–216.  https://doi.org/10.1016/j.fsigen.2012.10.004 CrossRefGoogle Scholar
  12. 12.
    Shi MS, Liu YJ, Zhang JT, Bai RF, Lv XJ, Ma SH (2015) Analysis of 24 Y chromosomal STR haplotypes in a Chinese Han population sample from Henan Province, Central China. Forensic Sci Int: Genet 17:83–86.  https://doi.org/10.1016/j.fsigen.2015.04.001 CrossRefGoogle Scholar
  13. 13.
    Wang D, Liu FQ, Kong LX, Yuan ZY, Chen G, Ye J (2015) Population data of 17 Y-STR haplotypes in Jining Han population from Shandong province, East China. Forensic Sci Int: Genet 19:47–49.  https://doi.org/10.1016/j.fsigen.2015.05.017 CrossRefGoogle Scholar
  14. 14.
    Luo H, Song F, Zhang LS, Hou YP (2015) Genetic polymorphism of 23 Y-STR loci in the Zhuang minority population in Guangxi of China. Int J Legal Med 129(4):737–738.  https://doi.org/10.1007/s00414-015-1175-5 CrossRefPubMedGoogle Scholar
  15. 15.
    Guo F (2015) Population genetics for 17 Y-STR loci in Mongolian ethnic minority from Liaoning Province, Northeast China. Forensic Sci Int: Genet 17:153–154.  https://doi.org/10.1016/j.fsigen.2015.05.008 CrossRefGoogle Scholar
  16. 16.
    Guo F, Zhang L, Jiang X (2015) Population genetics of 17 Y-STR loci in Xibe ethnic minority from Liaoning Province, Northeast China. Forensic Sci Int: Genet 16:86–87.  https://doi.org/10.1016/j.fsigen.2014.12.007 CrossRefGoogle Scholar
  17. 17.
    Kang LL, Liu K, Ma YM (2007) Y chromosome STR haplotypes of Tibetan Living Tibet Lassa. Forensic Sci Int 172(1):79–83.  https://doi.org/10.1016/j.forsciint.2006.08.010 CrossRefPubMedGoogle Scholar
  18. 18.
    Zhu BF, Wu YM, Shen CM, Yang TH, Deng YJ, Xun X, Tian YF, Yan JC, Li T (2008) Genetic analysis of 17 Y-chromosomal STRs haplotypes of Chinese Tibetan ethnic group residing in Qinghai province of China. Forensic Sci Int 175(2):238–243.  https://doi.org/10.1016/j.forsciint.2007.06.012 CrossRefPubMedGoogle Scholar
  19. 19.
    Shan WJ, Ablimit A, Zhou WJ, Zhang FC, Ma ZH, Zheng XF (2014) Genetic polymorphism of 17 Y chromosomal STRs in Kazakh and Uighur populations from Xinjiang, China. Int J Legal Med 128(5):743–744.  https://doi.org/10.1007/s00414-013-0948-y CrossRefPubMedGoogle Scholar
  20. 20.
    He J, Guo F (2013) Population genetics of 17 Y-STR loci in Chinese Manchu population from Liaoning Province, Northeast China. Forensic Sci Int: Genet 7(3):e84–e85.  https://doi.org/10.1016/j.fsigen.2012.12.006 CrossRefGoogle Scholar
  21. 21.
    Wu FC, Ho CW, Pu CE, Hu KY, Willuweit S, Roewer L, Liu DH (2011) Y-chromosomal STRs haplotypes in the Taiwanese Paiwan population. Int J Legal Med 125(1):39–43.  https://doi.org/10.1007/s00414-009-0416-x CrossRefPubMedGoogle Scholar
  22. 22.
    Wen B, Li H, Lu D, Song X, Zhang F, He Y, Li F, Gao Y, Mao X, Zhang L, Qian J, Tan J, Jin J, Huang W, Deka R, Su B, Chakraborty R, Jin L (2004) Genetic evidence supports demic diffusion of Han culture. Nature 431(7006):302–305.  https://doi.org/10.1038/nature02878 CrossRefPubMedGoogle Scholar

Copyright information

© Springer-Verlag GmbH Germany, part of Springer Nature 2018

Authors and Affiliations

  1. 1.Jilin Province Cancer HospitalChangchunChina
  2. 2.Center of Police and Forensic ScienceChangchunChina
  3. 3.MOE Key Laboratory of Contemporary Anthropology, School of Life SciencesFudan UniversityShanghaiChina

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